RNA–Protein interactions for RNA: ENST00000335272.9

PITPNB-202, Transcript of phosphatidylinositol transfer protein beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITPNB, Length 2,926 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-202ENST00000335272 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
PITPNB-202ENST00000335272 CCDC180Q9P1Z9 1646 aa29.21■■■□□ 2.27
PITPNB-202ENST00000335272 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
PITPNB-202ENST00000335272 DCAF8L2P0C7V8 631 aa28.19■■■□□ 2.1
PITPNB-202ENST00000335272 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
PITPNB-202ENST00000335272 DCAF1Q9Y4B6 1507 aa27.86■■■□□ 2.05
PITPNB-202ENST00000335272 ABCC9O60706 1549 aa27.63■■■□□ 2.01
PITPNB-202ENST00000335272 MYO15BQ96JP2 1530 aa27.39■■□□□ 1.97
PITPNB-202ENST00000335272 NACADO15069 1562 aa27.21■■□□□ 1.95
PITPNB-202ENST00000335272 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.95
PITPNB-202ENST00000335272 SCRIBQ14160 1630 aa27.11■■□□□ 1.93
PITPNB-202ENST00000335272 RB1CC1Q8TDY2 1594 aa26.93■■□□□ 1.9
PITPNB-202ENST00000335272 RSF1Q96T23 1441 aaPredicted RBP26.43■■□□□ 1.82
PITPNB-202ENST00000335272 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.81
PITPNB-202ENST00000335272 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
PITPNB-202ENST00000335272 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
PITPNB-202ENST00000335272 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
PITPNB-202ENST00000335272 BICRAQ9NZM4 1560 aa26.13■■□□□ 1.77
PITPNB-202ENST00000335272 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
PITPNB-202ENST00000335272 BAZ1AQ9NRL2 1556 aaPredicted RBP26.08■■□□□ 1.77
PITPNB-202ENST00000335272 WIZO95785 1651 aa26.01■■□□□ 1.75
PITPNB-202ENST00000335272 SMARCA4P51532 1647 aa25.92■■□□□ 1.74
PITPNB-202ENST00000335272 TOP2AP11388 1531 aaKnown RBP25.67■■□□□ 1.7
PITPNB-202ENST00000335272 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
PITPNB-202ENST00000335272 CCDC88BA6NC98 1476 aa25.51■■□□□ 1.67
PITPNB-202ENST00000335272 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
PITPNB-202ENST00000335272 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
PITPNB-202ENST00000335272 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
PITPNB-202ENST00000335272 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
PITPNB-202ENST00000335272 EIF4G1Q04637 1599 aaKnown RBP25.34■■□□□ 1.65
PITPNB-202ENST00000335272 LOC105371045A0A1W2PR82 267 aa25.23■■□□□ 1.63
PITPNB-202ENST00000335272 NCAPD3P42695 1498 aa25.16■■□□□ 1.62
PITPNB-202ENST00000335272 FAM9AQ8IZU1 332 aaPredicted RBP25.13■■□□□ 1.61
PITPNB-202ENST00000335272 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
PITPNB-202ENST00000335272 HMGXB3Q12766 1538 aa25.09■■□□□ 1.61
PITPNB-202ENST00000335272 CC2D2AQ9P2K1 1620 aa24.91■■□□□ 1.58
PITPNB-202ENST00000335272 EHMT2Q96KQ7 1210 aa24.87■■□□□ 1.57
PITPNB-202ENST00000335272 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
PITPNB-202ENST00000335272 SOGA1O94964 1423 aa24.73■■□□□ 1.55
PITPNB-202ENST00000335272 SYNJ1O43426 1573 aa24.73■■□□□ 1.55
PITPNB-202ENST00000335272 CFTRP13569 1480 aa24.71■■□□□ 1.55
PITPNB-202ENST00000335272 RUSC2Q8N2Y8 1516 aa24.62■■□□□ 1.53
PITPNB-202ENST00000335272 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
PITPNB-202ENST00000335272 EEA1Q15075 1411 aa24.59■■□□□ 1.53
PITPNB-202ENST00000335272 CSRNP3Q8WYN3 585 aa24.59■■□□□ 1.53
PITPNB-202ENST00000335272 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
PITPNB-202ENST00000335272 BIVM-ERCC5R4GMW8 1640 aa24.47■■□□□ 1.51
PITPNB-202ENST00000335272 CUX1P39880 1505 aa24.46■■□□□ 1.51
PITPNB-202ENST00000335272 PRDM2Q13029 1718 aa24.45■■□□□ 1.51
PITPNB-202ENST00000335272 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
PITPNB-202ENST00000335272 PCGF6Q9BYE7 350 aa24.4■■□□□ 1.5
PITPNB-202ENST00000335272 UBTFP17480 764 aaKnown RBP24.39■■□□□ 1.49
PITPNB-202ENST00000335272 NESP48681 1621 aa24.34■■□□□ 1.49
PITPNB-202ENST00000335272 FANCD2Q9BXW9 1451 aa24.33■■□□□ 1.49
PITPNB-202ENST00000335272 GOLGA3Q08378 1498 aa24.33■■□□□ 1.48
PITPNB-202ENST00000335272 TNIKQ9UKE5 1360 aa24.32■■□□□ 1.48
PITPNB-202ENST00000335272 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
PITPNB-202ENST00000335272 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
PITPNB-202ENST00000335272 KIF21BO75037 1637 aa24.24■■□□□ 1.47
PITPNB-202ENST00000335272 LAMC3Q9Y6N6 1575 aa24.22■■□□□ 1.47
PITPNB-202ENST00000335272 TRIM26Q12899 539 aaPredicted RBP24.21■■□□□ 1.47
PITPNB-202ENST00000335272 KIF27Q86VH2 1401 aa24.21■■□□□ 1.47
PITPNB-202ENST00000335272 RAPGEF2Q9Y4G8 1499 aa24.18■■□□□ 1.46
PITPNB-202ENST00000335272 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
PITPNB-202ENST00000335272 CUX2O14529 1486 aa24.11■■□□□ 1.45
PITPNB-202ENST00000335272 PDS5BQ9NTI5 1447 aa24.11■■□□□ 1.45
PITPNB-202ENST00000335272 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
PITPNB-202ENST00000335272 PPARGC1BQ86YN6 1023 aaKnown RBP24.09■■□□□ 1.45
PITPNB-202ENST00000335272 PRXQ9BXM0 1461 aa24.09■■□□□ 1.45
PITPNB-202ENST00000335272 TOPBP1Q92547 1522 aa24.08■■□□□ 1.45
PITPNB-202ENST00000335272 ERICH3Q5RHP9 1530 aa24.02■■□□□ 1.44
PITPNB-202ENST00000335272 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
PITPNB-202ENST00000335272 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
PITPNB-202ENST00000335272 URB2Q14146 1524 aaKnown RBP24■■□□□ 1.43
PITPNB-202ENST00000335272 CLIP1P30622 1438 aa24■■□□□ 1.43
PITPNB-202ENST00000335272 IGF1RP08069 1367 aa24■■□□□ 1.43
PITPNB-202ENST00000335272 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
PITPNB-202ENST00000335272 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.42
PITPNB-202ENST00000335272 ABCA10Q8WWZ4 1543 aa23.91■■□□□ 1.42
PITPNB-202ENST00000335272 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
PITPNB-202ENST00000335272 TTBK1Q5TCY1 1321 aaPredicted RBP23.86■■□□□ 1.41
PITPNB-202ENST00000335272 HRCP23327 699 aa23.84■■□□□ 1.41
PITPNB-202ENST00000335272 VPS8Q8N3P4 1428 aa23.79■■□□□ 1.4
PITPNB-202ENST00000335272 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
PITPNB-202ENST00000335272 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
PITPNB-202ENST00000335272 WDR97A6NE52 1622 aa23.72■■□□□ 1.39
PITPNB-202ENST00000335272 APLP2Q06481 763 aa23.7■■□□□ 1.39
PITPNB-202ENST00000335272 GAPVD1Q14C86 1478 aa23.69■■□□□ 1.38
PITPNB-202ENST00000335272 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
PITPNB-202ENST00000335272 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
PITPNB-202ENST00000335272 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
PITPNB-202ENST00000335272 CUL7Q14999 1698 aa23.64■■□□□ 1.38
PITPNB-202ENST00000335272 ERCC6Q03468 1493 aa23.64■■□□□ 1.37
PITPNB-202ENST00000335272 ARHGAP35Q9NRY4 1499 aa23.64■■□□□ 1.37
PITPNB-202ENST00000335272 WDR62O43379 1518 aa23.57■■□□□ 1.36
PITPNB-202ENST00000335272 AQRO60306 1485 aaKnown RBP eCLIP23.55■■□□□ 1.366e-7■■■□□ 16.7
PITPNB-202ENST00000335272 IFT140Q96RY7 1462 aa23.5■■□□□ 1.35
PITPNB-202ENST00000335272 P3H3Q8IVL6 736 aa23.5■■□□□ 1.35
PITPNB-202ENST00000335272 ZNF608Q9ULD9 1512 aaPredicted RBP23.46■■□□□ 1.35
PITPNB-202ENST00000335272 PBRM1Q86U86 1689 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms