Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.01□□□□□ -0.49
CEACAM3P40198 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.01□□□□□ -0.49
CEACAM3P40198 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.01□□□□□ -0.49
CEACAM3P40198 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CEACAM3P40198 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 TPT1P11-201ENST00000458482 498 ntBASIC12.01□□□□□ -0.49
CEACAM3P40198 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.01□□□□□ -0.49
CEACAM3P40198 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 SNX29P1-201ENST00000548357 1007 ntBASIC12.01□□□□□ -0.49
CEACAM3P40198 AP006547.1-201ENST00000563435 692 ntBASIC12.01□□□□□ -0.49
CEACAM3P40198 EEF1DP1-201ENST00000585891 896 ntBASIC12.01□□□□□ -0.49
CEACAM3P40198 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.01□□□□□ -0.49
CEACAM3P40198 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.01□□□□□ -0.49
CEACAM3P40198 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CEACAM3P40198 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CEACAM3P40198 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 AC107918.4-201ENST00000641966 3141 ntBASIC12.01□□□□□ -0.49
CEACAM3P40198 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CEACAM3P40198 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CEACAM3P40198 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12□□□□□ -0.49
CEACAM3P40198 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CEACAM3P40198 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CEACAM3P40198 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CEACAM3P40198 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 MTHFR-210ENST00000641407 2387 ntBASIC12□□□□□ -0.49
CEACAM3P40198 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 INE2-201ENST00000630399 1874 ntBASIC12□□□□□ -0.49
CEACAM3P40198 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CEACAM3P40198 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12□□□□□ -0.49
CEACAM3P40198 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CEACAM3P40198 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CEACAM3P40198 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12□□□□□ -0.49
CEACAM3P40198 ANKRD19P-201ENST00000338192 862 ntBASIC12□□□□□ -0.49
CEACAM3P40198 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12□□□□□ -0.49
CEACAM3P40198 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12□□□□□ -0.49
CEACAM3P40198 AC099336.1-201ENST00000417053 1171 ntBASIC12□□□□□ -0.49
CEACAM3P40198 FAM58BP-201ENST00000439056 645 ntBASIC12□□□□□ -0.49
CEACAM3P40198 Z93015.1-201ENST00000451718 390 ntBASIC12□□□□□ -0.49
CEACAM3P40198 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12□□□□□ -0.49
CEACAM3P40198 AC022447.6-201ENST00000515522 438 ntBASIC12□□□□□ -0.49
CEACAM3P40198 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12□□□□□ -0.49
CEACAM3P40198 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12□□□□□ -0.49
CEACAM3P40198 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12□□□□□ -0.49
CEACAM3P40198 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12□□□□□ -0.49
CEACAM3P40198 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CEACAM3P40198 F10-203ENST00000409306 1450 ntTSL 3 BASIC12□□□□□ -0.49
CEACAM3P40198 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12□□□□□ -0.49
CEACAM3P40198 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12□□□□□ -0.49
CEACAM3P40198 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CEACAM3P40198 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12□□□□□ -0.49
CEACAM3P40198 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12□□□□□ -0.49
CEACAM3P40198 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CEACAM3P40198 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms