RNA–Protein interactions for RNA: ENST00000262891.8

MARK4-201, Transcript of microtubule affinity regulating kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MARK4, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-201ENST00000262891 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.1
MARK4-201ENST00000262891 CCDC180Q9P1Z9 1646 aa24.35■■□□□ 1.49
MARK4-201ENST00000262891 PELP1Q8IZL8 1130 aaKnown RBP24.01■■□□□ 1.43
MARK4-201ENST00000262891 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
MARK4-201ENST00000262891 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
MARK4-201ENST00000262891 ABCC9O60706 1549 aa23.46■■□□□ 1.35
MARK4-201ENST00000262891 MYT1Q01538 1121 aa23.41■■□□□ 1.34
MARK4-201ENST00000262891 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
MARK4-201ENST00000262891 HRCP23327 699 aa23.22■■□□□ 1.31
MARK4-201ENST00000262891 DCAF1Q9Y4B6 1507 aa23■■□□□ 1.27
MARK4-201ENST00000262891 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
MARK4-201ENST00000262891 SCRIBQ14160 1630 aa22.78■■□□□ 1.24
MARK4-201ENST00000262891 NACADO15069 1562 aa22.67■■□□□ 1.22
MARK4-201ENST00000262891 MYO15BQ96JP2 1530 aa22.67■■□□□ 1.22
MARK4-201ENST00000262891 PCGF6Q9BYE7 350 aa22.66■■□□□ 1.22
MARK4-201ENST00000262891 RB1CC1Q8TDY2 1594 aa22.53■■□□□ 1.2
MARK4-201ENST00000262891 UNC13AQ9UPW8 1703 aa22.46■■□□□ 1.19
MARK4-201ENST00000262891 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
MARK4-201ENST00000262891 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
MARK4-201ENST00000262891 PABPN1Q86U42 306 aaKnown RBP eCLIP22.24■■□□□ 1.15
MARK4-201ENST00000262891 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
MARK4-201ENST00000262891 CECR2Q9BXF3 1484 aa22.13■■□□□ 1.13
MARK4-201ENST00000262891 TTBK1Q5TCY1 1321 aaPredicted RBP22.06■■□□□ 1.12
MARK4-201ENST00000262891 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
MARK4-201ENST00000262891 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
MARK4-201ENST00000262891 WIZO95785 1651 aa21.79■■□□□ 1.08
MARK4-201ENST00000262891 GTF3C3Q9Y5Q9 886 aa21.78■■□□□ 1.08
MARK4-201ENST00000262891 ACIN1Q9UKV3 1341 aaKnown RBP21.75■■□□□ 1.07
MARK4-201ENST00000262891 CENPBP07199 599 aaPredicted RBP21.73■■□□□ 1.07
MARK4-201ENST00000262891 ZEB1P37275 1124 aaPredicted RBP21.71■■□□□ 1.07
MARK4-201ENST00000262891 SMARCA4P51532 1647 aa21.67■■□□□ 1.06
MARK4-201ENST00000262891 BCL11AQ9H165 835 aa21.67■■□□□ 1.06
MARK4-201ENST00000262891 NEUROD1Q13562 356 aa21.62■■□□□ 1.05
MARK4-201ENST00000262891 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
MARK4-201ENST00000262891 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
MARK4-201ENST00000262891 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
MARK4-201ENST00000262891 PRKCSHP14314 528 aaPredicted RBP21.39■■□□□ 1.01
MARK4-201ENST00000262891 CHIC1Q5VXU3 224 aa21.37■■□□□ 1.01
MARK4-201ENST00000262891 FAM9AQ8IZU1 332 aaPredicted RBP21.34■■□□□ 1.01
MARK4-201ENST00000262891 ATAD2BQ9ULI0 1458 aa21.31■■□□□ 1
MARK4-201ENST00000262891 TOP2AP11388 1531 aaKnown RBP21.29■■□□□ 1
MARK4-201ENST00000262891 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
MARK4-201ENST00000262891 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
MARK4-201ENST00000262891 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
MARK4-201ENST00000262891 ERICH6Q7L0X2 663 aa21.21■□□□□ 0.99
MARK4-201ENST00000262891 YTHDC1Q96MU7 727 aaKnown RBP21.16■□□□□ 0.98
MARK4-201ENST00000262891 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
MARK4-201ENST00000262891 BAZ1BQ9UIG0 1483 aaKnown RBP21.13■□□□□ 0.97
MARK4-201ENST00000262891 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
MARK4-201ENST00000262891 ANP32EQ9BTT0 268 aa21.06■□□□□ 0.96
MARK4-201ENST00000262891 DIEXFQ68CQ4 756 aaKnown RBP21.05■□□□□ 0.96
MARK4-201ENST00000262891 LOC105371045A0A1W2PR82 267 aa21.05■□□□□ 0.96
MARK4-201ENST00000262891 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
MARK4-201ENST00000262891 ABCC8Q09428 1581 aa20.95■□□□□ 0.94
MARK4-201ENST00000262891 HMGXB3Q12766 1538 aa20.94■□□□□ 0.94
MARK4-201ENST00000262891 CSRNP3Q8WYN3 585 aa20.85■□□□□ 0.93
MARK4-201ENST00000262891 CCER1Q8TC90 406 aaPredicted RBP20.83■□□□□ 0.93
MARK4-201ENST00000262891 TRIM41Q8WV44 630 aa20.79■□□□□ 0.92
MARK4-201ENST00000262891 EHMT2Q96KQ7 1210 aa20.7■□□□□ 0.9
MARK4-201ENST00000262891 NESP48681 1621 aa20.7■□□□□ 0.9
MARK4-201ENST00000262891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.65■□□□□ 0.9
MARK4-201ENST00000262891 SYNJ1O43426 1573 aa20.64■□□□□ 0.89
MARK4-201ENST00000262891 CFTRP13569 1480 aa20.61■□□□□ 0.89
MARK4-201ENST00000262891 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
MARK4-201ENST00000262891 WRNQ14191 1432 aaPredicted RBP eCLIP20.52■□□□□ 0.88
MARK4-201ENST00000262891 CADPSQ9ULU8 1353 aa20.52■□□□□ 0.87
MARK4-201ENST00000262891 SOGA1O94964 1423 aa20.51■□□□□ 0.87
MARK4-201ENST00000262891 APLP2Q06481 763 aa20.49■□□□□ 0.87
MARK4-201ENST00000262891 CUX1P39880 1505 aa20.46■□□□□ 0.87
MARK4-201ENST00000262891 PRDM2Q13029 1718 aa20.45■□□□□ 0.86
MARK4-201ENST00000262891 TSHZ2Q9NRE2 1034 aa20.44■□□□□ 0.86
MARK4-201ENST00000262891 TOP2BQ02880 1626 aa20.36■□□□□ 0.85
MARK4-201ENST00000262891 FANCD2Q9BXW9 1451 aa20.36■□□□□ 0.85
MARK4-201ENST00000262891 KIF21AQ7Z4S6 1674 aa20.34■□□□□ 0.85
MARK4-201ENST00000262891 ZNF316A6NFI3 1004 aaPredicted RBP20.33■□□□□ 0.85
MARK4-201ENST00000262891 BIVM-ERCC5R4GMW8 1640 aa20.33■□□□□ 0.84
MARK4-201ENST00000262891 SUPT16HQ9Y5B9 1047 aaKnown RBP20.32■□□□□ 0.84
MARK4-201ENST00000262891 MIER1Q8N108 512 aa20.3■□□□□ 0.84
MARK4-201ENST00000262891 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
MARK4-201ENST00000262891 BCANQ96GW7 911 aa20.25■□□□□ 0.83
MARK4-201ENST00000262891 ANO8Q9HCE9 1232 aaPredicted RBP20.25■□□□□ 0.83
MARK4-201ENST00000262891 CLSPNQ9HAW4 1339 aa20.23■□□□□ 0.83
MARK4-201ENST00000262891 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
MARK4-201ENST00000262891 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
MARK4-201ENST00000262891 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
MARK4-201ENST00000262891 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
MARK4-201ENST00000262891 TOPBP1Q92547 1522 aa20.15■□□□□ 0.82
MARK4-201ENST00000262891 POLA1P09884 1462 aaPredicted RBP20.09■□□□□ 0.81
MARK4-201ENST00000262891 DNMBPQ6XZF7 1577 aa20.09■□□□□ 0.81
MARK4-201ENST00000262891 PDS5BQ9NTI5 1447 aa20.07■□□□□ 0.8
MARK4-201ENST00000262891 RAPGEF2Q9Y4G8 1499 aa20.03■□□□□ 0.8
MARK4-201ENST00000262891 CCDC136Q96JN2 1154 aa20.03■□□□□ 0.8
MARK4-201ENST00000262891 CUX2O14529 1486 aa20.01■□□□□ 0.79
MARK4-201ENST00000262891 RBM19Q9Y4C8 960 aaKnown RBP20■□□□□ 0.79
MARK4-201ENST00000262891 NEFLP07196 543 aa19.98■□□□□ 0.79
MARK4-201ENST00000262891 DEKP35659 375 aaKnown RBP19.95■□□□□ 0.78
MARK4-201ENST00000262891 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
MARK4-201ENST00000262891 UBTFP17480 764 aaKnown RBP19.93■□□□□ 0.78
MARK4-201ENST00000262891 RANGAP1P46060 587 aaPredicted RBP19.93■□□□□ 0.78
MARK4-201ENST00000262891 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms