RNA–Protein interactions for RNA: ENST00000526453.1

AP003392.4-202, humanhuman

TSL 2 BASIC

Gene AP003392.4, Length 1,359 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003392.4-202ENST00000526453 NISCHQ9Y2I1 1504 aa36.79■■■■□ 3.48
AP003392.4-202ENST00000526453 CCDC180Q9P1Z9 1646 aa32.89■■■□□ 2.85
AP003392.4-202ENST00000526453 ABCC9O60706 1549 aa32.86■■■□□ 2.85
AP003392.4-202ENST00000526453 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
AP003392.4-202ENST00000526453 DCAF8L2P0C7V8 631 aa31.25■■■□□ 2.59
AP003392.4-202ENST00000526453 NACADO15069 1562 aa31.16■■■□□ 2.58
AP003392.4-202ENST00000526453 MYO15BQ96JP2 1530 aa30.75■■■□□ 2.51
AP003392.4-202ENST00000526453 DNAJC5BQ9UF47 199 aa30.71■■■□□ 2.51
AP003392.4-202ENST00000526453 PABPN1Q86U42 306 aaKnown RBP eCLIP30.69■■■□□ 2.5
AP003392.4-202ENST00000526453 ZCCHC6Q5VYS8 1495 aaKnown RBP30.47■■■□□ 2.47
AP003392.4-202ENST00000526453 UNC13AQ9UPW8 1703 aa30.42■■■□□ 2.46
AP003392.4-202ENST00000526453 DCAF1Q9Y4B6 1507 aa30.39■■■□□ 2.46
AP003392.4-202ENST00000526453 BICRAQ9NZM4 1560 aa30.3■■■□□ 2.44
AP003392.4-202ENST00000526453 SHROOM4Q9ULL8 1493 aa30.02■■■□□ 2.4
AP003392.4-202ENST00000526453 SCRIBQ14160 1630 aa29.98■■■□□ 2.39
AP003392.4-202ENST00000526453 CC2D2AQ9P2K1 1620 aa29.64■■■□□ 2.34
AP003392.4-202ENST00000526453 CECR2Q9BXF3 1484 aa29.61■■■□□ 2.33
AP003392.4-202ENST00000526453 EIF4G1Q04637 1599 aaKnown RBP29.61■■■□□ 2.33
AP003392.4-202ENST00000526453 NCAPD3P42695 1498 aa28.78■■■□□ 2.2
AP003392.4-202ENST00000526453 ATAD2BQ9ULI0 1458 aa28.69■■■□□ 2.18
AP003392.4-202ENST00000526453 SMARCA2P51531 1590 aa28.63■■■□□ 2.17
AP003392.4-202ENST00000526453 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
AP003392.4-202ENST00000526453 BAZ1AQ9NRL2 1556 aaPredicted RBP28.57■■■□□ 2.16
AP003392.4-202ENST00000526453 HMGXB3Q12766 1538 aa28.51■■■□□ 2.16
AP003392.4-202ENST00000526453 ERCC6Q03468 1493 aa28.44■■■□□ 2.14
AP003392.4-202ENST00000526453 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
AP003392.4-202ENST00000526453 PEG3Q9GZU2 1588 aa28.33■■■□□ 2.13
AP003392.4-202ENST00000526453 MROH2BQ7Z745 1585 aa28.31■■■□□ 2.12
AP003392.4-202ENST00000526453 CUX2O14529 1486 aa28.3■■■□□ 2.12
AP003392.4-202ENST00000526453 DNAJC5Q9H3Z4 198 aa28.23■■■□□ 2.11
AP003392.4-202ENST00000526453 NESP48681 1621 aa28.21■■■□□ 2.11
AP003392.4-202ENST00000526453 LAMC3Q9Y6N6 1575 aa28.08■■■□□ 2.09
AP003392.4-202ENST00000526453 PDS5BQ9NTI5 1447 aa28.02■■■□□ 2.08
AP003392.4-202ENST00000526453 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.07
AP003392.4-202ENST00000526453 WIZO95785 1651 aa27.95■■■□□ 2.07
AP003392.4-202ENST00000526453 RSF1Q96T23 1441 aaPredicted RBP27.83■■■□□ 2.05
AP003392.4-202ENST00000526453 THOC2Q8NI27 1593 aaKnown RBP27.83■■■□□ 2.05
AP003392.4-202ENST00000526453 KIF21AQ7Z4S6 1674 aa27.77■■■□□ 2.04
AP003392.4-202ENST00000526453 MRC2Q9UBG0 1479 aa27.68■■■□□ 2.02
AP003392.4-202ENST00000526453 TOP2AP11388 1531 aaKnown RBP27.65■■■□□ 2.02
AP003392.4-202ENST00000526453 CEP164Q9UPV0 1460 aa27.62■■■□□ 2.01
AP003392.4-202ENST00000526453 CFTRP13569 1480 aa27.61■■■□□ 2.01
AP003392.4-202ENST00000526453 FANCD2Q9BXW9 1451 aa27.59■■■□□ 2.01
AP003392.4-202ENST00000526453 WDR62O43379 1518 aa27.55■■■□□ 2
AP003392.4-202ENST00000526453 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
AP003392.4-202ENST00000526453 URB2Q14146 1524 aaKnown RBP27.29■■□□□ 1.96
AP003392.4-202ENST00000526453 PRDM2Q13029 1718 aa27.18■■□□□ 1.94
AP003392.4-202ENST00000526453 OSCARQ8IYS5 282 aa27.18■■□□□ 1.94
AP003392.4-202ENST00000526453 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
AP003392.4-202ENST00000526453 TRIM41Q8WV44 630 aa27.08■■□□□ 1.93
AP003392.4-202ENST00000526453 IFT140Q96RY7 1462 aa27.08■■□□□ 1.92
AP003392.4-202ENST00000526453 TOPBP1Q92547 1522 aa27.05■■□□□ 1.92
AP003392.4-202ENST00000526453 DNMBPQ6XZF7 1577 aa26.95■■□□□ 1.9
AP003392.4-202ENST00000526453 ZNF608Q9ULD9 1512 aaPredicted RBP26.94■■□□□ 1.9
AP003392.4-202ENST00000526453 SUPT5HO00267 1087 aaKnown RBP26.84■■□□□ 1.89
AP003392.4-202ENST00000526453 AQRO60306 1485 aaKnown RBP eCLIP26.78■■□□□ 1.88
AP003392.4-202ENST00000526453 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
AP003392.4-202ENST00000526453 SOGA1O94964 1423 aa26.76■■□□□ 1.87
AP003392.4-202ENST00000526453 EIF4G3O43432 1585 aaKnown RBP26.75■■□□□ 1.87
AP003392.4-202ENST00000526453 FBLN2P98095 1184 aa26.73■■□□□ 1.87
AP003392.4-202ENST00000526453 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
AP003392.4-202ENST00000526453 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
AP003392.4-202ENST00000526453 TDRD9Q8NDG6 1382 aaKnown RBP26.67■■□□□ 1.86
AP003392.4-202ENST00000526453 FGD5Q6ZNL6 1462 aa26.64■■□□□ 1.85
AP003392.4-202ENST00000526453 CUX1P39880 1505 aa26.59■■□□□ 1.85
AP003392.4-202ENST00000526453 RIMBP3CA6NJZ7 1639 aa26.58■■□□□ 1.85
AP003392.4-202ENST00000526453 RIMBP3BA6NNM3 1639 aa26.58■■□□□ 1.85
AP003392.4-202ENST00000526453 RIMBP3Q9UFD9 1639 aa26.58■■□□□ 1.85
AP003392.4-202ENST00000526453 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
AP003392.4-202ENST00000526453 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
AP003392.4-202ENST00000526453 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
AP003392.4-202ENST00000526453 CYB5RLQ6IPT4 315 aa26.51■■□□□ 1.83
AP003392.4-202ENST00000526453 CHD1O14646 1710 aa26.5■■□□□ 1.83
AP003392.4-202ENST00000526453 GRIN2BQ13224 1484 aa26.48■■□□□ 1.83
AP003392.4-202ENST00000526453 SNAPC4Q5SXM2 1469 aa26.47■■□□□ 1.83
AP003392.4-202ENST00000526453 MAGI1Q96QZ7 1491 aaPredicted RBP26.44■■□□□ 1.82
AP003392.4-202ENST00000526453 GAPVD1Q14C86 1478 aa26.39■■□□□ 1.82
AP003392.4-202ENST00000526453 ABCA10Q8WWZ4 1543 aa26.35■■□□□ 1.81
AP003392.4-202ENST00000526453 WRNQ14191 1432 aaPredicted RBP eCLIP26.35■■□□□ 1.81
AP003392.4-202ENST00000526453 SYNJ2O15056 1496 aa26.35■■□□□ 1.81
AP003392.4-202ENST00000526453 SYNJ1O43426 1573 aa26.33■■□□□ 1.81
AP003392.4-202ENST00000526453 ARAP1Q96P48 1450 aa26.27■■□□□ 1.8
AP003392.4-202ENST00000526453 CLASP1Q7Z460 1538 aa26.23■■□□□ 1.79
AP003392.4-202ENST00000526453 PBRM1Q86U86 1689 aa26.23■■□□□ 1.79
AP003392.4-202ENST00000526453 TRHP20396 242 aaPredicted RBP26.22■■□□□ 1.79
AP003392.4-202ENST00000526453 TOP2BQ02880 1626 aa26.21■■□□□ 1.79
AP003392.4-202ENST00000526453 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
AP003392.4-202ENST00000526453 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
AP003392.4-202ENST00000526453 GRIN2AQ12879 1464 aa26.09■■□□□ 1.77
AP003392.4-202ENST00000526453 FHAD1B1AJZ9 1412 aa26.08■■□□□ 1.77
AP003392.4-202ENST00000526453 ERICH3Q5RHP9 1530 aa26.03■■□□□ 1.76
AP003392.4-202ENST00000526453 ADAMTS12P58397 1594 aa26.01■■□□□ 1.75
AP003392.4-202ENST00000526453 NUP160Q12769 1436 aa25.99■■□□□ 1.75
AP003392.4-202ENST00000526453 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
AP003392.4-202ENST00000526453 JPH4Q96JJ6 628 aa25.88■■□□□ 1.73
AP003392.4-202ENST00000526453 KIF27Q86VH2 1401 aa25.83■■□□□ 1.73
AP003392.4-202ENST00000526453 ERCC6L2Q5T890 1561 aa25.81■■□□□ 1.72
AP003392.4-202ENST00000526453 PRG4Q92954 1404 aaPredicted RBP25.79■■□□□ 1.72
AP003392.4-202ENST00000526453 IGF1RP08069 1367 aa25.78■■□□□ 1.72
AP003392.4-202ENST00000526453 SHROOM2Q13796 1616 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms