RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
SNX29P1-201ENST00000548357 CCDC180Q9P1Z9 1646 aa34.6■■■■□ 3.13
SNX29P1-201ENST00000548357 ABCC9O60706 1549 aa34.53■■■■□ 3.12
SNX29P1-201ENST00000548357 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
SNX29P1-201ENST00000548357 NACADO15069 1562 aa32.58■■■□□ 2.81
SNX29P1-201ENST00000548357 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
SNX29P1-201ENST00000548357 DNAJC5BQ9UF47 199 aa32.38■■■□□ 2.77
SNX29P1-201ENST00000548357 DCAF8L2P0C7V8 631 aa32.34■■■□□ 2.77
SNX29P1-201ENST00000548357 MYO15BQ96JP2 1530 aa32.1■■■□□ 2.73
SNX29P1-201ENST00000548357 PABPN1Q86U42 306 aaKnown RBP eCLIP32.1■■■□□ 2.73
SNX29P1-201ENST00000548357 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
SNX29P1-201ENST00000548357 ZCCHC6Q5VYS8 1495 aaKnown RBP31.94■■■□□ 2.7
SNX29P1-201ENST00000548357 DCAF1Q9Y4B6 1507 aa31.75■■■□□ 2.67
SNX29P1-201ENST00000548357 SCRIBQ14160 1630 aa31.57■■■□□ 2.64
SNX29P1-201ENST00000548357 SHROOM4Q9ULL8 1493 aa31.34■■■□□ 2.61
SNX29P1-201ENST00000548357 CC2D2AQ9P2K1 1620 aa31.24■■■□□ 2.59
SNX29P1-201ENST00000548357 EIF4G1Q04637 1599 aaKnown RBP31.15■■■□□ 2.58
SNX29P1-201ENST00000548357 CECR2Q9BXF3 1484 aa31.04■■■□□ 2.56
SNX29P1-201ENST00000548357 SMARCA4P51532 1647 aa30.1■■■□□ 2.41
SNX29P1-201ENST00000548357 NCAPD3P42695 1498 aa30.06■■■□□ 2.4
SNX29P1-201ENST00000548357 ATAD2BQ9ULI0 1458 aa30.03■■■□□ 2.4
SNX29P1-201ENST00000548357 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
SNX29P1-201ENST00000548357 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
SNX29P1-201ENST00000548357 BAZ1AQ9NRL2 1556 aaPredicted RBP29.85■■■□□ 2.37
SNX29P1-201ENST00000548357 PEG3Q9GZU2 1588 aa29.75■■■□□ 2.35
SNX29P1-201ENST00000548357 NESP48681 1621 aa29.74■■■□□ 2.35
SNX29P1-201ENST00000548357 MROH2BQ7Z745 1585 aa29.73■■■□□ 2.35
SNX29P1-201ENST00000548357 BAZ1BQ9UIG0 1483 aaKnown RBP29.72■■■□□ 2.35
SNX29P1-201ENST00000548357 ERCC6Q03468 1493 aa29.7■■■□□ 2.35
SNX29P1-201ENST00000548357 CUX2O14529 1486 aa29.64■■■□□ 2.34
SNX29P1-201ENST00000548357 DNAJC5Q9H3Z4 198 aa29.54■■■□□ 2.32
SNX29P1-201ENST00000548357 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
SNX29P1-201ENST00000548357 WIZO95785 1651 aa29.45■■■□□ 2.31
SNX29P1-201ENST00000548357 KIF21AQ7Z4S6 1674 aa29.45■■■□□ 2.31
SNX29P1-201ENST00000548357 LAMC3Q9Y6N6 1575 aa29.43■■■□□ 2.3
SNX29P1-201ENST00000548357 PDS5BQ9NTI5 1447 aa29.13■■■□□ 2.25
SNX29P1-201ENST00000548357 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
SNX29P1-201ENST00000548357 RSF1Q96T23 1441 aaPredicted RBP29.05■■■□□ 2.24
SNX29P1-201ENST00000548357 MRC2Q9UBG0 1479 aa28.99■■■□□ 2.23
SNX29P1-201ENST00000548357 WDR62O43379 1518 aa28.97■■■□□ 2.23
SNX29P1-201ENST00000548357 TOP2AP11388 1531 aaKnown RBP28.97■■■□□ 2.23
SNX29P1-201ENST00000548357 CEP164Q9UPV0 1460 aa28.87■■■□□ 2.21
SNX29P1-201ENST00000548357 FANCD2Q9BXW9 1451 aa28.86■■■□□ 2.21
SNX29P1-201ENST00000548357 CFTRP13569 1480 aa28.85■■■□□ 2.21
SNX29P1-201ENST00000548357 PRDM2Q13029 1718 aa28.8■■■□□ 2.2
SNX29P1-201ENST00000548357 URB2Q14146 1524 aaKnown RBP28.7■■■□□ 2.19
SNX29P1-201ENST00000548357 CCDC88BA6NC98 1476 aa28.62■■■□□ 2.17
SNX29P1-201ENST00000548357 TOPBP1Q92547 1522 aa28.36■■■□□ 2.13
SNX29P1-201ENST00000548357 ZNF608Q9ULD9 1512 aaPredicted RBP28.35■■■□□ 2.13
SNX29P1-201ENST00000548357 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
SNX29P1-201ENST00000548357 IFT140Q96RY7 1462 aa28.27■■■□□ 2.12
SNX29P1-201ENST00000548357 DNMBPQ6XZF7 1577 aa28.26■■■□□ 2.11
SNX29P1-201ENST00000548357 EIF4G3O43432 1585 aaKnown RBP28.23■■■□□ 2.11
SNX29P1-201ENST00000548357 OSCARQ8IYS5 282 aa28.19■■■□□ 2.1
SNX29P1-201ENST00000548357 TARBP1Q13395 1621 aaKnown RBP28.18■■■□□ 2.1
SNX29P1-201ENST00000548357 ABCC8Q09428 1581 aa28.14■■■□□ 2.1
SNX29P1-201ENST00000548357 CHD1O14646 1710 aa28.1■■■□□ 2.09
SNX29P1-201ENST00000548357 RIMBP3CA6NJZ7 1639 aa28.09■■■□□ 2.09
SNX29P1-201ENST00000548357 RIMBP3BA6NNM3 1639 aa28.09■■■□□ 2.09
SNX29P1-201ENST00000548357 RIMBP3Q9UFD9 1639 aa28.09■■■□□ 2.09
SNX29P1-201ENST00000548357 POLA1P09884 1462 aaPredicted RBP28.07■■■□□ 2.08
SNX29P1-201ENST00000548357 AQRO60306 1485 aaKnown RBP eCLIP28.04■■■□□ 2.08
SNX29P1-201ENST00000548357 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
SNX29P1-201ENST00000548357 CUX1P39880 1505 aa27.93■■■□□ 2.06
SNX29P1-201ENST00000548357 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
SNX29P1-201ENST00000548357 FGD5Q6ZNL6 1462 aa27.9■■■□□ 2.06
SNX29P1-201ENST00000548357 WDR97A6NE52 1622 aa27.85■■■□□ 2.05
SNX29P1-201ENST00000548357 SOGA1O94964 1423 aa27.85■■■□□ 2.05
SNX29P1-201ENST00000548357 TDRD9Q8NDG6 1382 aaKnown RBP27.83■■■□□ 2.05
SNX29P1-201ENST00000548357 SNAPC4Q5SXM2 1469 aa27.77■■■□□ 2.04
SNX29P1-201ENST00000548357 PBRM1Q86U86 1689 aa27.74■■■□□ 2.03
SNX29P1-201ENST00000548357 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
SNX29P1-201ENST00000548357 FBLN2P98095 1184 aa27.72■■■□□ 2.03
SNX29P1-201ENST00000548357 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
SNX29P1-201ENST00000548357 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
SNX29P1-201ENST00000548357 ABCA5Q8WWZ7 1642 aa27.62■■■□□ 2.01
SNX29P1-201ENST00000548357 MAGI1Q96QZ7 1491 aaPredicted RBP27.62■■■□□ 2.01
SNX29P1-201ENST00000548357 GRIN2BQ13224 1484 aa27.61■■■□□ 2.01
SNX29P1-201ENST00000548357 CYB5RLQ6IPT4 315 aa27.59■■■□□ 2.01
SNX29P1-201ENST00000548357 SYNJ1O43426 1573 aa27.56■■■□□ 2
SNX29P1-201ENST00000548357 GAPVD1Q14C86 1478 aa27.55■■■□□ 2
SNX29P1-201ENST00000548357 ABCA10Q8WWZ4 1543 aa27.55■■■□□ 2
SNX29P1-201ENST00000548357 BIVM-ERCC5R4GMW8 1640 aa27.53■■■□□ 2
SNX29P1-201ENST00000548357 SYNJ2O15056 1496 aa27.53■■■□□ 2
SNX29P1-201ENST00000548357 CHMP7Q8WUX9 453 aaPredicted RBP27.48■■□□□ 1.99
SNX29P1-201ENST00000548357 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
SNX29P1-201ENST00000548357 ADAMTS12P58397 1594 aa27.39■■□□□ 1.98
SNX29P1-201ENST00000548357 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
SNX29P1-201ENST00000548357 CEP170Q5SW79 1584 aa27.32■■□□□ 1.96
SNX29P1-201ENST00000548357 ERCC6L2Q5T890 1561 aa27.32■■□□□ 1.96
SNX29P1-201ENST00000548357 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
SNX29P1-201ENST00000548357 TRHP20396 242 aaPredicted RBP27.23■■□□□ 1.95
SNX29P1-201ENST00000548357 NUP160Q12769 1436 aa27.21■■□□□ 1.95
SNX29P1-201ENST00000548357 ERICH3Q5RHP9 1530 aa27.19■■□□□ 1.94
SNX29P1-201ENST00000548357 SHROOM2Q13796 1616 aa27.19■■□□□ 1.94
SNX29P1-201ENST00000548357 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
SNX29P1-201ENST00000548357 RUSC2Q8N2Y8 1516 aa27.02■■□□□ 1.92
SNX29P1-201ENST00000548357 PRG4Q92954 1404 aaPredicted RBP26.91■■□□□ 1.9
SNX29P1-201ENST00000548357 KIF13AQ9H1H9 1805 aa26.91■■□□□ 1.9
SNX29P1-201ENST00000548357 CUL7Q14999 1698 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms