RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 NISCHQ9Y2I1 1504 aa40.13■■■■■ 4.01
PUDP-206ENST00000540122 ABCC9O60706 1549 aa37.35■■■■□ 3.57
PUDP-206ENST00000540122 CCDC180Q9P1Z9 1646 aa36.38■■■■□ 3.41
PUDP-206ENST00000540122 DNAJC5BQ9UF47 199 aa35.89■■■■□ 3.34
PUDP-206ENST00000540122 RB1CC1Q8TDY2 1594 aa35.1■■■■□ 3.21
PUDP-206ENST00000540122 NACADO15069 1562 aa34.64■■■■□ 3.14
PUDP-206ENST00000540122 PABPN1Q86U42 306 aaKnown RBP eCLIP34.63■■■■□ 3.13
PUDP-206ENST00000540122 UNC13AQ9UPW8 1703 aa34.27■■■■□ 3.08
PUDP-206ENST00000540122 DCAF8L2P0C7V8 631 aa34.25■■■■□ 3.07
PUDP-206ENST00000540122 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
PUDP-206ENST00000540122 MYO15BQ96JP2 1530 aa33.86■■■■□ 3.01
PUDP-206ENST00000540122 CECR2Q9BXF3 1484 aa33.75■■■□□ 2.99
PUDP-206ENST00000540122 CC2D2AQ9P2K1 1620 aa33.68■■■□□ 2.98
PUDP-206ENST00000540122 DNAJC5Q9H3Z4 198 aa33.62■■■□□ 2.97
PUDP-206ENST00000540122 SHROOM4Q9ULL8 1493 aa33.58■■■□□ 2.97
PUDP-206ENST00000540122 EIF4G1Q04637 1599 aaKnown RBP33.38■■■□□ 2.93
PUDP-206ENST00000540122 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
PUDP-206ENST00000540122 DCAF1Q9Y4B6 1507 aa33.08■■■□□ 2.89
PUDP-206ENST00000540122 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
PUDP-206ENST00000540122 CUX2O14529 1486 aa32.57■■■□□ 2.8
PUDP-206ENST00000540122 ERCC6Q03468 1493 aa32.3■■■□□ 2.76
PUDP-206ENST00000540122 NCAPD3P42695 1498 aa32.01■■■□□ 2.71
PUDP-206ENST00000540122 NESP48681 1621 aa31.82■■■□□ 2.69
PUDP-206ENST00000540122 ATAD2BQ9ULI0 1458 aa31.78■■■□□ 2.68
PUDP-206ENST00000540122 TRIM41Q8WV44 630 aa31.76■■■□□ 2.67
PUDP-206ENST00000540122 HMGXB3Q12766 1538 aa31.68■■■□□ 2.66
PUDP-206ENST00000540122 THOC2Q8NI27 1593 aaKnown RBP31.68■■■□□ 2.66
PUDP-206ENST00000540122 SMARCA2P51531 1590 aa31.62■■■□□ 2.65
PUDP-206ENST00000540122 SMARCA4P51532 1647 aa31.49■■■□□ 2.63
PUDP-206ENST00000540122 BAZ1BQ9UIG0 1483 aaKnown RBP31.42■■■□□ 2.62
PUDP-206ENST00000540122 LAMC3Q9Y6N6 1575 aa31.42■■■□□ 2.62
PUDP-206ENST00000540122 KIF21AQ7Z4S6 1674 aa31.33■■■□□ 2.61
PUDP-206ENST00000540122 PDS5BQ9NTI5 1447 aa31.28■■■□□ 2.6
PUDP-206ENST00000540122 PEG3Q9GZU2 1588 aa31.2■■■□□ 2.58
PUDP-206ENST00000540122 BAZ1AQ9NRL2 1556 aaPredicted RBP31.2■■■□□ 2.58
PUDP-206ENST00000540122 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
PUDP-206ENST00000540122 WDR62O43379 1518 aa31.03■■■□□ 2.56
PUDP-206ENST00000540122 CADPSQ9ULU8 1353 aa30.99■■■□□ 2.55
PUDP-206ENST00000540122 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
PUDP-206ENST00000540122 OSCARQ8IYS5 282 aa30.91■■■□□ 2.54
PUDP-206ENST00000540122 CEP164Q9UPV0 1460 aa30.76■■■□□ 2.52
PUDP-206ENST00000540122 FANCD2Q9BXW9 1451 aa30.65■■■□□ 2.5
PUDP-206ENST00000540122 RIMBP3CA6NJZ7 1639 aa30.62■■■□□ 2.49
PUDP-206ENST00000540122 RIMBP3BA6NNM3 1639 aa30.62■■■□□ 2.49
PUDP-206ENST00000540122 RIMBP3Q9UFD9 1639 aa30.62■■■□□ 2.49
PUDP-206ENST00000540122 WIZO95785 1651 aa30.48■■■□□ 2.47
PUDP-206ENST00000540122 URB2Q14146 1524 aaKnown RBP30.47■■■□□ 2.47
PUDP-206ENST00000540122 CFTRP13569 1480 aa30.44■■■□□ 2.46
PUDP-206ENST00000540122 ARHGEF11O15085 1522 aa30.44■■■□□ 2.46
PUDP-206ENST00000540122 CYB5RLQ6IPT4 315 aa30.26■■■□□ 2.43
PUDP-206ENST00000540122 ZNF608Q9ULD9 1512 aaPredicted RBP30.25■■■□□ 2.43
PUDP-206ENST00000540122 TRHP20396 242 aaPredicted RBP30.22■■■□□ 2.43
PUDP-206ENST00000540122 IFT140Q96RY7 1462 aa30.19■■■□□ 2.42
PUDP-206ENST00000540122 ARAP1Q96P48 1450 aa30.09■■■□□ 2.41
PUDP-206ENST00000540122 TOP2AP11388 1531 aaKnown RBP30.05■■■□□ 2.4
PUDP-206ENST00000540122 AEBP2Q6ZN18 517 aaPredicted RBP30.02■■■□□ 2.4
PUDP-206ENST00000540122 EIF4G3O43432 1585 aaKnown RBP30.01■■■□□ 2.39
PUDP-206ENST00000540122 PRDM2Q13029 1718 aa29.98■■■□□ 2.39
PUDP-206ENST00000540122 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
PUDP-206ENST00000540122 RSF1Q96T23 1441 aaPredicted RBP29.95■■■□□ 2.38
PUDP-206ENST00000540122 CHD1O14646 1710 aa29.93■■■□□ 2.38
PUDP-206ENST00000540122 AQRO60306 1485 aaKnown RBP eCLIP29.85■■■□□ 2.37
PUDP-206ENST00000540122 FBLN2P98095 1184 aa29.81■■■□□ 2.36
PUDP-206ENST00000540122 ABCC8Q09428 1581 aa29.8■■■□□ 2.36
PUDP-206ENST00000540122 DNMBPQ6XZF7 1577 aa29.76■■■□□ 2.35
PUDP-206ENST00000540122 TARBP1Q13395 1621 aaKnown RBP29.75■■■□□ 2.35
PUDP-206ENST00000540122 CCDC88BA6NC98 1476 aa29.72■■■□□ 2.35
PUDP-206ENST00000540122 CLASP1Q7Z460 1538 aa29.61■■■□□ 2.33
PUDP-206ENST00000540122 POLA1P09884 1462 aaPredicted RBP29.6■■■□□ 2.33
PUDP-206ENST00000540122 SNAPC4Q5SXM2 1469 aa29.52■■■□□ 2.32
PUDP-206ENST00000540122 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
PUDP-206ENST00000540122 RAD54L2Q9Y4B4 1467 aa29.51■■■□□ 2.31
PUDP-206ENST00000540122 SYNJ1O43426 1573 aa29.48■■■□□ 2.31
PUDP-206ENST00000540122 CHMP7Q8WUX9 453 aaPredicted RBP29.44■■■□□ 2.3
PUDP-206ENST00000540122 SOGA1O94964 1423 aa29.43■■■□□ 2.3
PUDP-206ENST00000540122 MAGI1Q96QZ7 1491 aaPredicted RBP29.39■■■□□ 2.3
PUDP-206ENST00000540122 WDR97A6NE52 1622 aa29.37■■■□□ 2.29
PUDP-206ENST00000540122 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
PUDP-206ENST00000540122 SYNJ2O15056 1496 aa29.31■■■□□ 2.28
PUDP-206ENST00000540122 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
PUDP-206ENST00000540122 FGD5Q6ZNL6 1462 aa29.28■■■□□ 2.28
PUDP-206ENST00000540122 CUX1P39880 1505 aa29.11■■■□□ 2.25
PUDP-206ENST00000540122 ERCC6L2Q5T890 1561 aa29.09■■■□□ 2.25
PUDP-206ENST00000540122 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
PUDP-206ENST00000540122 CEP170Q5SW79 1584 aa28.94■■■□□ 2.22
PUDP-206ENST00000540122 KIF13AQ9H1H9 1805 aa28.93■■■□□ 2.22
PUDP-206ENST00000540122 ABCA5Q8WWZ7 1642 aa28.93■■■□□ 2.22
PUDP-206ENST00000540122 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
PUDP-206ENST00000540122 ABCA10Q8WWZ4 1543 aa28.89■■■□□ 2.21
PUDP-206ENST00000540122 NUP160Q12769 1436 aa28.87■■■□□ 2.21
PUDP-206ENST00000540122 ILDR1Q86SU0 546 aaPredicted RBP28.86■■■□□ 2.21
PUDP-206ENST00000540122 SHROOM2Q13796 1616 aa28.82■■■□□ 2.2
PUDP-206ENST00000540122 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
PUDP-206ENST00000540122 KDM4FA0A1W2PPD8 638 aa28.76■■■□□ 2.19
PUDP-206ENST00000540122 FAM69CQ0P6D2 419 aa28.72■■■□□ 2.19
PUDP-206ENST00000540122 ABCC10Q5T3U5 1492 aa28.71■■■□□ 2.19
PUDP-206ENST00000540122 FHAD1B1AJZ9 1412 aa28.66■■■□□ 2.18
PUDP-206ENST00000540122 PRG4Q92954 1404 aaPredicted RBP28.66■■■□□ 2.18
PUDP-206ENST00000540122 MAPKBP1O60336 1514 aa28.6■■■□□ 2.17
PUDP-206ENST00000540122 DIP2BQ9P265 1576 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms