RNA–Protein interactions for RNA: ENST00000607357.1

COPS9-205, Transcript of COP9 signalosome subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS9, Length 418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-205ENST00000607357 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.53
COPS9-205ENST00000607357 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
COPS9-205ENST00000607357 ABCC9O60706 1549 aa32.75■■■□□ 2.83
COPS9-205ENST00000607357 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
COPS9-205ENST00000607357 NACADO15069 1562 aa31.23■■■□□ 2.59
COPS9-205ENST00000607357 DCAF8L2P0C7V8 631 aa31.03■■■□□ 2.56
COPS9-205ENST00000607357 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
COPS9-205ENST00000607357 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
COPS9-205ENST00000607357 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.5
COPS9-205ENST00000607357 DCAF1Q9Y4B6 1507 aa30.67■■■□□ 2.5
COPS9-205ENST00000607357 PABPN1Q86U42 306 aaKnown RBP eCLIP30.49■■■□□ 2.47
COPS9-205ENST00000607357 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
COPS9-205ENST00000607357 DNAJC5BQ9UF47 199 aa30.33■■■□□ 2.45
COPS9-205ENST00000607357 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
COPS9-205ENST00000607357 SHROOM4Q9ULL8 1493 aa30.1■■■□□ 2.41
COPS9-205ENST00000607357 EIF4G1Q04637 1599 aaKnown RBP29.66■■■□□ 2.34
COPS9-205ENST00000607357 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
COPS9-205ENST00000607357 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
COPS9-205ENST00000607357 SMARCA4P51532 1647 aa28.87■■■□□ 2.21
COPS9-205ENST00000607357 NCAPD3P42695 1498 aa28.8■■■□□ 2.2
COPS9-205ENST00000607357 BAZ1AQ9NRL2 1556 aaPredicted RBP28.77■■■□□ 2.2
COPS9-205ENST00000607357 ATAD2BQ9ULI0 1458 aa28.77■■■□□ 2.2
COPS9-205ENST00000607357 SMARCA2P51531 1590 aa28.74■■■□□ 2.19
COPS9-205ENST00000607357 HMGXB3Q12766 1538 aa28.68■■■□□ 2.18
COPS9-205ENST00000607357 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
COPS9-205ENST00000607357 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
COPS9-205ENST00000607357 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
COPS9-205ENST00000607357 ERCC6Q03468 1493 aa28.27■■■□□ 2.12
COPS9-205ENST00000607357 WIZO95785 1651 aa28.26■■■□□ 2.11
COPS9-205ENST00000607357 NESP48681 1621 aa28.24■■■□□ 2.11
COPS9-205ENST00000607357 LAMC3Q9Y6N6 1575 aa28.13■■■□□ 2.09
COPS9-205ENST00000607357 CUX2O14529 1486 aa28.1■■■□□ 2.09
COPS9-205ENST00000607357 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
COPS9-205ENST00000607357 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
COPS9-205ENST00000607357 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
COPS9-205ENST00000607357 TOP2AP11388 1531 aaKnown RBP27.94■■■□□ 2.06
COPS9-205ENST00000607357 CADPSQ9ULU8 1353 aa27.93■■■□□ 2.06
COPS9-205ENST00000607357 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
COPS9-205ENST00000607357 CFTRP13569 1480 aa27.71■■■□□ 2.03
COPS9-205ENST00000607357 MRC2Q9UBG0 1479 aa27.69■■■□□ 2.02
COPS9-205ENST00000607357 CEP164Q9UPV0 1460 aa27.65■■■□□ 2.02
COPS9-205ENST00000607357 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.01
COPS9-205ENST00000607357 WDR62O43379 1518 aa27.62■■■□□ 2.01
COPS9-205ENST00000607357 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
COPS9-205ENST00000607357 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
COPS9-205ENST00000607357 PRDM2Q13029 1718 aa27.55■■■□□ 2
COPS9-205ENST00000607357 URB2Q14146 1524 aaKnown RBP27.4■■□□□ 1.98
COPS9-205ENST00000607357 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
COPS9-205ENST00000607357 DNMBPQ6XZF7 1577 aa27.12■■□□□ 1.93
COPS9-205ENST00000607357 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
COPS9-205ENST00000607357 IFT140Q96RY7 1462 aa27.07■■□□□ 1.92
COPS9-205ENST00000607357 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
COPS9-205ENST00000607357 ZNF608Q9ULD9 1512 aaPredicted RBP26.99■■□□□ 1.91
COPS9-205ENST00000607357 TARBP1Q13395 1621 aaKnown RBP26.91■■□□□ 1.9
COPS9-205ENST00000607357 POLA1P09884 1462 aaPredicted RBP26.91■■□□□ 1.9
COPS9-205ENST00000607357 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
COPS9-205ENST00000607357 CUX1P39880 1505 aa26.83■■□□□ 1.89
COPS9-205ENST00000607357 OSCARQ8IYS5 282 aa26.8■■□□□ 1.88
COPS9-205ENST00000607357 FGD5Q6ZNL6 1462 aa26.8■■□□□ 1.88
COPS9-205ENST00000607357 RAD54L2Q9Y4B4 1467 aa26.78■■□□□ 1.88
COPS9-205ENST00000607357 AQRO60306 1485 aaKnown RBP eCLIP26.76■■□□□ 1.87
COPS9-205ENST00000607357 SOGA1O94964 1423 aa26.75■■□□□ 1.87
COPS9-205ENST00000607357 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
COPS9-205ENST00000607357 TDRD9Q8NDG6 1382 aaKnown RBP26.65■■□□□ 1.86
COPS9-205ENST00000607357 CHD1O14646 1710 aa26.65■■□□□ 1.86
COPS9-205ENST00000607357 SNAPC4Q5SXM2 1469 aa26.55■■□□□ 1.84
COPS9-205ENST00000607357 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
COPS9-205ENST00000607357 BIVM-ERCC5R4GMW8 1640 aa26.53■■□□□ 1.84
COPS9-205ENST00000607357 TOP2BQ02880 1626 aa26.51■■□□□ 1.83
COPS9-205ENST00000607357 ABCA10Q8WWZ4 1543 aa26.51■■□□□ 1.83
COPS9-205ENST00000607357 GRIN2BQ13224 1484 aa26.51■■□□□ 1.83
COPS9-205ENST00000607357 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
COPS9-205ENST00000607357 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
COPS9-205ENST00000607357 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
COPS9-205ENST00000607357 WRNQ14191 1432 aaPredicted RBP eCLIP26.5■■□□□ 1.83
COPS9-205ENST00000607357 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
COPS9-205ENST00000607357 MAGI1Q96QZ7 1491 aaPredicted RBP26.49■■□□□ 1.83
COPS9-205ENST00000607357 PBRM1Q86U86 1689 aa26.49■■□□□ 1.83
COPS9-205ENST00000607357 FBLN2P98095 1184 aa26.48■■□□□ 1.83
COPS9-205ENST00000607357 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
COPS9-205ENST00000607357 GAPVD1Q14C86 1478 aa26.46■■□□□ 1.83
COPS9-205ENST00000607357 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
COPS9-205ENST00000607357 SYNJ2O15056 1496 aa26.39■■□□□ 1.82
COPS9-205ENST00000607357 CHMP7Q8WUX9 453 aaPredicted RBP26.35■■□□□ 1.81
COPS9-205ENST00000607357 CLASP1Q7Z460 1538 aa26.33■■□□□ 1.81
COPS9-205ENST00000607357 ADAMTS12P58397 1594 aa26.25■■□□□ 1.79
COPS9-205ENST00000607357 ARAP1Q96P48 1450 aa26.21■■□□□ 1.79
COPS9-205ENST00000607357 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
COPS9-205ENST00000607357 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
COPS9-205ENST00000607357 CYB5RLQ6IPT4 315 aa26.14■■□□□ 1.78
COPS9-205ENST00000607357 FHAD1B1AJZ9 1412 aa26.14■■□□□ 1.77
COPS9-205ENST00000607357 CEP170Q5SW79 1584 aa26.08■■□□□ 1.77
COPS9-205ENST00000607357 NUP160Q12769 1436 aa26.07■■□□□ 1.76
COPS9-205ENST00000607357 KIF27Q86VH2 1401 aa25.97■■□□□ 1.75
COPS9-205ENST00000607357 SHROOM2Q13796 1616 aa25.96■■□□□ 1.75
COPS9-205ENST00000607357 ERCC6L2Q5T890 1561 aa25.93■■□□□ 1.74
COPS9-205ENST00000607357 CUL7Q14999 1698 aa25.91■■□□□ 1.74
COPS9-205ENST00000607357 IGF1RP08069 1367 aa25.88■■□□□ 1.73
COPS9-205ENST00000607357 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
COPS9-205ENST00000607357 PRG4Q92954 1404 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms