RNA–Protein interactions for RNA: ENST00000339677.10

POLDIP3-202, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene POLDIP3, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-202ENST00000339677 NISCHQ9Y2I1 1504 aa38.28■■■■□ 3.72
POLDIP3-202ENST00000339677 ABCC9O60706 1549 aa34.75■■■■□ 3.15
POLDIP3-202ENST00000339677 CCDC180Q9P1Z9 1646 aa34.23■■■■□ 3.07
POLDIP3-202ENST00000339677 DNAJC5BQ9UF47 199 aa32.99■■■□□ 2.87
POLDIP3-202ENST00000339677 RB1CC1Q8TDY2 1594 aa32.82■■■□□ 2.84
POLDIP3-202ENST00000339677 DCAF8L2P0C7V8 631 aa32.68■■■□□ 2.82
POLDIP3-202ENST00000339677 NACADO15069 1562 aa32.55■■■□□ 2.8
POLDIP3-202ENST00000339677 PABPN1Q86U42 306 aaKnown RBP eCLIP32.46■■■□□ 2.79
POLDIP3-202ENST00000339677 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
POLDIP3-202ENST00000339677 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
POLDIP3-202ENST00000339677 BICRAQ9NZM4 1560 aa31.93■■■□□ 2.7
POLDIP3-202ENST00000339677 ZCCHC6Q5VYS8 1495 aaKnown RBP31.62■■■□□ 2.65
POLDIP3-202ENST00000339677 DCAF1Q9Y4B6 1507 aa31.52■■■□□ 2.64
POLDIP3-202ENST00000339677 SHROOM4Q9ULL8 1493 aa31.33■■■□□ 2.61
POLDIP3-202ENST00000339677 SCRIBQ14160 1630 aa31.33■■■□□ 2.61
POLDIP3-202ENST00000339677 CECR2Q9BXF3 1484 aa31.29■■■□□ 2.6
POLDIP3-202ENST00000339677 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
POLDIP3-202ENST00000339677 EIF4G1Q04637 1599 aaKnown RBP31.14■■■□□ 2.58
POLDIP3-202ENST00000339677 DNAJC5Q9H3Z4 198 aa30.39■■■□□ 2.46
POLDIP3-202ENST00000339677 NCAPD3P42695 1498 aa30.16■■■□□ 2.42
POLDIP3-202ENST00000339677 ATAD2BQ9ULI0 1458 aa30.03■■■□□ 2.4
POLDIP3-202ENST00000339677 ERCC6Q03468 1493 aa29.96■■■□□ 2.39
POLDIP3-202ENST00000339677 CUX2O14529 1486 aa29.93■■■□□ 2.38
POLDIP3-202ENST00000339677 SMARCA4P51532 1647 aa29.83■■■□□ 2.37
POLDIP3-202ENST00000339677 SMARCA2P51531 1590 aa29.82■■■□□ 2.36
POLDIP3-202ENST00000339677 NESP48681 1621 aa29.79■■■□□ 2.36
POLDIP3-202ENST00000339677 HMGXB3Q12766 1538 aa29.77■■■□□ 2.36
POLDIP3-202ENST00000339677 BAZ1BQ9UIG0 1483 aaKnown RBP29.68■■■□□ 2.34
POLDIP3-202ENST00000339677 BAZ1AQ9NRL2 1556 aaPredicted RBP29.66■■■□□ 2.34
POLDIP3-202ENST00000339677 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
POLDIP3-202ENST00000339677 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
POLDIP3-202ENST00000339677 LAMC3Q9Y6N6 1575 aa29.39■■■□□ 2.3
POLDIP3-202ENST00000339677 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
POLDIP3-202ENST00000339677 PDS5BQ9NTI5 1447 aa29.34■■■□□ 2.29
POLDIP3-202ENST00000339677 CADPSQ9ULU8 1353 aa29.26■■■□□ 2.28
POLDIP3-202ENST00000339677 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
POLDIP3-202ENST00000339677 WIZO95785 1651 aa29.1■■■□□ 2.25
POLDIP3-202ENST00000339677 MRC2Q9UBG0 1479 aa29.05■■■□□ 2.24
POLDIP3-202ENST00000339677 TRIM41Q8WV44 630 aa28.99■■■□□ 2.23
POLDIP3-202ENST00000339677 WDR62O43379 1518 aa28.94■■■□□ 2.22
POLDIP3-202ENST00000339677 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
POLDIP3-202ENST00000339677 CEP164Q9UPV0 1460 aa28.89■■■□□ 2.22
POLDIP3-202ENST00000339677 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
POLDIP3-202ENST00000339677 CFTRP13569 1480 aa28.83■■■□□ 2.21
POLDIP3-202ENST00000339677 OSCARQ8IYS5 282 aa28.72■■■□□ 2.19
POLDIP3-202ENST00000339677 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
POLDIP3-202ENST00000339677 URB2Q14146 1524 aaKnown RBP28.66■■■□□ 2.18
POLDIP3-202ENST00000339677 CCDC88BA6NC98 1476 aa28.49■■■□□ 2.15
POLDIP3-202ENST00000339677 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
POLDIP3-202ENST00000339677 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
POLDIP3-202ENST00000339677 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
POLDIP3-202ENST00000339677 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
POLDIP3-202ENST00000339677 ABCC8Q09428 1581 aa28.17■■■□□ 2.1
POLDIP3-202ENST00000339677 RIMBP3CA6NJZ7 1639 aa28.17■■■□□ 2.1
POLDIP3-202ENST00000339677 RIMBP3BA6NNM3 1639 aa28.17■■■□□ 2.1
POLDIP3-202ENST00000339677 RIMBP3Q9UFD9 1639 aa28.17■■■□□ 2.1
POLDIP3-202ENST00000339677 AQRO60306 1485 aaKnown RBP eCLIP28.15■■■□□ 2.13e-7■■■■■ 39.4
POLDIP3-202ENST00000339677 CYB5RLQ6IPT4 315 aa28.12■■■□□ 2.09
POLDIP3-202ENST00000339677 ARHGEF11O15085 1522 aa28.11■■■□□ 2.09
POLDIP3-202ENST00000339677 DNMBPQ6XZF7 1577 aa28.1■■■□□ 2.09
POLDIP3-202ENST00000339677 FBLN2P98095 1184 aa28.08■■■□□ 2.09
POLDIP3-202ENST00000339677 EIF4G3O43432 1585 aaKnown RBP28.06■■■□□ 2.08
POLDIP3-202ENST00000339677 TARBP1Q13395 1621 aaKnown RBP28.01■■■□□ 2.07
POLDIP3-202ENST00000339677 POLA1P09884 1462 aaPredicted RBP28■■■□□ 2.07
POLDIP3-202ENST00000339677 RAD54L2Q9Y4B4 1467 aa27.98■■■□□ 2.07
POLDIP3-202ENST00000339677 TDRD9Q8NDG6 1382 aaKnown RBP27.97■■■□□ 2.07
POLDIP3-202ENST00000339677 SOGA1O94964 1423 aa27.94■■■□□ 2.06
POLDIP3-202ENST00000339677 CHD1O14646 1710 aa27.86■■■□□ 2.05
POLDIP3-202ENST00000339677 TRHP20396 242 aaPredicted RBP27.85■■■□□ 2.05
POLDIP3-202ENST00000339677 ARAP1Q96P48 1450 aa27.83■■■□□ 2.05
POLDIP3-202ENST00000339677 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
POLDIP3-202ENST00000339677 FGD5Q6ZNL6 1462 aa27.79■■■□□ 2.04
POLDIP3-202ENST00000339677 SNAPC4Q5SXM2 1469 aa27.75■■■□□ 2.03
POLDIP3-202ENST00000339677 CUX1P39880 1505 aa27.72■■■□□ 2.03
POLDIP3-202ENST00000339677 GRIN2BQ13224 1484 aa27.64■■■□□ 2.02
POLDIP3-202ENST00000339677 MAGI1Q96QZ7 1491 aaPredicted RBP27.62■■■□□ 2.01
POLDIP3-202ENST00000339677 CLASP1Q7Z460 1538 aa27.61■■■□□ 2.01
POLDIP3-202ENST00000339677 WDR97A6NE52 1622 aa27.58■■■□□ 2.01
POLDIP3-202ENST00000339677 SUPT5HO00267 1087 aaKnown RBP27.57■■■□□ 2
POLDIP3-202ENST00000339677 SYNJ2O15056 1496 aa27.57■■■□□ 2
POLDIP3-202ENST00000339677 SYNJ1O43426 1573 aa27.55■■■□□ 2
POLDIP3-202ENST00000339677 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
POLDIP3-202ENST00000339677 ABCA10Q8WWZ4 1543 aa27.44■■□□□ 1.98
POLDIP3-202ENST00000339677 PBRM1Q86U86 1689 aa27.35■■□□□ 1.97
POLDIP3-202ENST00000339677 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.97
POLDIP3-202ENST00000339677 ABCA5Q8WWZ7 1642 aa27.33■■□□□ 1.97
POLDIP3-202ENST00000339677 GRIN2AQ12879 1464 aa27.28■■□□□ 1.96
POLDIP3-202ENST00000339677 ERCC6L2Q5T890 1561 aa27.26■■□□□ 1.95
POLDIP3-202ENST00000339677 NUP160Q12769 1436 aa27.21■■□□□ 1.95
POLDIP3-202ENST00000339677 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
POLDIP3-202ENST00000339677 FHAD1B1AJZ9 1412 aa27.17■■□□□ 1.94
POLDIP3-202ENST00000339677 CEP170Q5SW79 1584 aa27.17■■□□□ 1.94
POLDIP3-202ENST00000339677 ADAMTS12P58397 1594 aa27.15■■□□□ 1.94
POLDIP3-202ENST00000339677 TOP2BQ02880 1626 aa27.15■■□□□ 1.94
POLDIP3-202ENST00000339677 BIVM-ERCC5R4GMW8 1640 aa27.09■■□□□ 1.93
POLDIP3-202ENST00000339677 JPH4Q96JJ6 628 aa27.09■■□□□ 1.93
POLDIP3-202ENST00000339677 ERICH3Q5RHP9 1530 aa27.05■■□□□ 1.92
POLDIP3-202ENST00000339677 PRG4Q92954 1404 aaPredicted RBP27.03■■□□□ 1.92
POLDIP3-202ENST00000339677 SHROOM2Q13796 1616 aa27.01■■□□□ 1.92
POLDIP3-202ENST00000339677 NPM1P06748 294 aaKnown RBP eCLIP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms