RNA–Protein interactions for RNA: ENST00000342745.4

SUSD6-201, Transcript of sushi domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUSD6, Length 5,388 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD6-201ENST00000342745 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
SUSD6-201ENST00000342745 PELP1Q8IZL8 1130 aaKnown RBP21.81■■□□□ 1.08
SUSD6-201ENST00000342745 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
SUSD6-201ENST00000342745 CCER1Q8TC90 406 aaPredicted RBP20.8■□□□□ 0.92
SUSD6-201ENST00000342745 APLP2Q06481 763 aa20.77■□□□□ 0.92
SUSD6-201ENST00000342745 ERICH6Q7L0X2 663 aa20.72■□□□□ 0.91
SUSD6-201ENST00000342745 FAM9AQ8IZU1 332 aaPredicted RBP20.68■□□□□ 0.9
SUSD6-201ENST00000342745 MYT1Q01538 1121 aa20.47■□□□□ 0.87
SUSD6-201ENST00000342745 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.86
SUSD6-201ENST00000342745 CENPBP07199 599 aaPredicted RBP20.43■□□□□ 0.86
SUSD6-201ENST00000342745 EHMT2Q96KQ7 1210 aa20.26■□□□□ 0.83
SUSD6-201ENST00000342745 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
SUSD6-201ENST00000342745 NEFLP07196 543 aa20.12■□□□□ 0.81
SUSD6-201ENST00000342745 SHROOM4Q9ULL8 1493 aa20.02■□□□□ 0.8
SUSD6-201ENST00000342745 PCGF6Q9BYE7 350 aa19.9■□□□□ 0.78
SUSD6-201ENST00000342745 YTHDC1Q96MU7 727 aaKnown RBP19.85■□□□□ 0.77
SUSD6-201ENST00000342745 DAXXQ9UER7 740 aaPredicted RBP19.78■□□□□ 0.76
SUSD6-201ENST00000342745 TTBK1Q5TCY1 1321 aaPredicted RBP19.71■□□□□ 0.75
SUSD6-201ENST00000342745 ATP1B4Q9UN42 357 aaPredicted RBP19.59■□□□□ 0.73
SUSD6-201ENST00000342745 TRIM41Q8WV44 630 aa19.46■□□□□ 0.71
SUSD6-201ENST00000342745 RANGAP1P46060 587 aaPredicted RBP19.45■□□□□ 0.7
SUSD6-201ENST00000342745 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
SUSD6-201ENST00000342745 RTL5Q5HYW3 569 aaPredicted RBP19.26■□□□□ 0.67
SUSD6-201ENST00000342745 ZNF316A6NFI3 1004 aaPredicted RBP19.2■□□□□ 0.66
SUSD6-201ENST00000342745 MYT1LQ9UL68 1186 aa19.09■□□□□ 0.65
SUSD6-201ENST00000342745 CLSPNQ9HAW4 1339 aa19.06■□□□□ 0.64
SUSD6-201ENST00000342745 POLR3GLQ9BT43 218 aa19.05■□□□□ 0.64
SUSD6-201ENST00000342745 TRIM26Q12899 539 aaPredicted RBP19.02■□□□□ 0.64
SUSD6-201ENST00000342745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.9■□□□□ 0.62
SUSD6-201ENST00000342745 HNRNPUL2Q1KMD3 747 aaKnown RBP18.9■□□□□ 0.62
SUSD6-201ENST00000342745 HRCP23327 699 aa18.86■□□□□ 0.61
SUSD6-201ENST00000342745 ZBTB47Q9UFB7 747 aaPredicted RBP18.82■□□□□ 0.6
SUSD6-201ENST00000342745 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
SUSD6-201ENST00000342745 ITGAEP38570 1179 aa18.77■□□□□ 0.6
SUSD6-201ENST00000342745 PPARGC1BQ86YN6 1023 aaKnown RBP18.66■□□□□ 0.58
SUSD6-201ENST00000342745 CNGB1Q14028 1251 aaPredicted RBP18.64■□□□□ 0.57
SUSD6-201ENST00000342745 CDK11AQ9UQ88 783 aaPredicted RBP18.6■□□□□ 0.57
SUSD6-201ENST00000342745 DIEXFQ68CQ4 756 aaKnown RBP18.54■□□□□ 0.56
SUSD6-201ENST00000342745 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
SUSD6-201ENST00000342745 NEFMP07197 916 aa18.49■□□□□ 0.55
SUSD6-201ENST00000342745 ANP32BQ92688 251 aaKnown RBP18.48■□□□□ 0.55
SUSD6-201ENST00000342745 ANP32CO43423 234 aa18.44■□□□□ 0.54
SUSD6-201ENST00000342745 CANXP27824 592 aaKnown RBP18.44■□□□□ 0.54
SUSD6-201ENST00000342745 GLIPR1L2Q4G1C9 344 aa18.4■□□□□ 0.54
SUSD6-201ENST00000342745 ANP32AP39687 249 aaKnown RBP18.39■□□□□ 0.53
SUSD6-201ENST00000342745 TRIM52Q96A61 297 aa18.39■□□□□ 0.53
SUSD6-201ENST00000342745 ABCC9O60706 1549 aa18.35■□□□□ 0.53
SUSD6-201ENST00000342745 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
SUSD6-201ENST00000342745 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
SUSD6-201ENST00000342745 SLC24A1O60721 1099 aa18.25■□□□□ 0.51
SUSD6-201ENST00000342745 BCANQ96GW7 911 aa18.24■□□□□ 0.51
SUSD6-201ENST00000342745 UPF2Q9HAU5 1272 aaKnown RBP18.19■□□□□ 0.5
SUSD6-201ENST00000342745 NEUROD1Q13562 356 aa18.18■□□□□ 0.5
SUSD6-201ENST00000342745 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
SUSD6-201ENST00000342745 HSP90AA1P07900 732 aaKnown RBP18.17■□□□□ 0.5
SUSD6-201ENST00000342745 EIF5BO60841 1220 aaKnown RBP18.16■□□□□ 0.5
SUSD6-201ENST00000342745 ZNF326Q5BKZ1 582 aaKnown RBP18.14■□□□□ 0.49
SUSD6-201ENST00000342745 LOC105371045A0A1W2PR82 267 aa18.11■□□□□ 0.49
SUSD6-201ENST00000342745 FBLN2P98095 1184 aa18.11■□□□□ 0.49
SUSD6-201ENST00000342745 BCL11AQ9H165 835 aa18.08■□□□□ 0.48
SUSD6-201ENST00000342745 CDK11BP21127 795 aaKnown RBP18.05■□□□□ 0.48
SUSD6-201ENST00000342745 NPM2Q86SE8 214 aaKnown RBP18■□□□□ 0.47
SUSD6-201ENST00000342745 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.92■□□□□ 0.46
SUSD6-201ENST00000342745 ACIN1Q9UKV3 1341 aaKnown RBP17.89■□□□□ 0.45
SUSD6-201ENST00000342745 ANP32EQ9BTT0 268 aa17.86■□□□□ 0.45
SUSD6-201ENST00000342745 ESF1Q9H501 851 aaKnown RBP17.86■□□□□ 0.45
SUSD6-201ENST00000342745 TNNT2P45379 298 aaPredicted RBP17.81■□□□□ 0.44
SUSD6-201ENST00000342745 NCLP19338 710 aaKnown RBP17.76■□□□□ 0.43
SUSD6-201ENST00000342745 FKBP8Q14318 412 aa17.74■□□□□ 0.43
SUSD6-201ENST00000342745 MYH16Q9H6N6 1097 aa17.74■□□□□ 0.43
SUSD6-201ENST00000342745 NPM1P06748 294 aaKnown RBP eCLIP17.73■□□□□ 0.43
SUSD6-201ENST00000342745 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
SUSD6-201ENST00000342745 CCDC136Q96JN2 1154 aa17.71■□□□□ 0.43
SUSD6-201ENST00000342745 TONSLQ96HA7 1378 aa17.69■□□□□ 0.42
SUSD6-201ENST00000342745 GOLGA6L22H0YM25 854 aa17.69■□□□□ 0.42
SUSD6-201ENST00000342745 TRIM44Q96DX7 344 aaPredicted RBP17.69■□□□□ 0.42
SUSD6-201ENST00000342745 BECN1Q14457 450 aa17.68■□□□□ 0.42
SUSD6-201ENST00000342745 HNRNPUQ00839 825 aaKnown RBP eCLIP17.67■□□□□ 0.42
SUSD6-201ENST00000342745 DDRGK1Q96HY6 314 aa17.67■□□□□ 0.42
SUSD6-201ENST00000342745 WDR43Q15061 677 aaKnown RBP eCLIP17.64■□□□□ 0.41
SUSD6-201ENST00000342745 ZRSR1Q15695 479 aaKnown RBP17.62■□□□□ 0.41
SUSD6-201ENST00000342745 TMC1Q8TDI8 760 aa17.61■□□□□ 0.41
SUSD6-201ENST00000342745 ZNF777Q9ULD5 760 aaPredicted RBP17.6■□□□□ 0.41
SUSD6-201ENST00000342745 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.4
SUSD6-201ENST00000342745 FAM9BQ8IZU0 186 aa17.57■□□□□ 0.4
SUSD6-201ENST00000342745 NBR1Q14596 966 aa17.56■□□□□ 0.4
SUSD6-201ENST00000342745 ARXQ96QS3 562 aa17.52■□□□□ 0.4
SUSD6-201ENST00000342745 PTMAP06454 111 aaKnown RBP17.51■□□□□ 0.39
SUSD6-201ENST00000342745 ARID3CA6NKF2 412 aa17.5■□□□□ 0.39
SUSD6-201ENST00000342745 ERICH6BQ5W0A0 696 aa17.5■□□□□ 0.39
SUSD6-201ENST00000342745 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
SUSD6-201ENST00000342745 CASC1Q6TDU7 716 aa17.48■□□□□ 0.39
SUSD6-201ENST00000342745 GOLGA6L6A8MZA4 724 aa17.46■□□□□ 0.39
SUSD6-201ENST00000342745 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.39
SUSD6-201ENST00000342745 NRDCO43847 1150 aa17.45■□□□□ 0.38
SUSD6-201ENST00000342745 P3H3Q8IVL6 736 aa17.44■□□□□ 0.38
SUSD6-201ENST00000342745 DNTTIP2Q5QJE6 756 aaKnown RBP17.44■□□□□ 0.38
SUSD6-201ENST00000342745 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
SUSD6-201ENST00000342745 PPM1GO15355 546 aaPredicted RBP17.42■□□□□ 0.38
SUSD6-201ENST00000342745 DDX10Q13206 875 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms