Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 AC004899.1-201ENST00000424687 1714 ntBASIC15.19■□□□□ 0.02
SCNN1AP37088 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.19■□□□□ 0.02
SCNN1AP37088 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SCNN1AP37088 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SCNN1AP37088 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SCNN1AP37088 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
SCNN1AP37088 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCNN1AP37088 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
SCNN1AP37088 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.18■□□□□ 0.02
SCNN1AP37088 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.18■□□□□ 0.02
SCNN1AP37088 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 MIR1908-201ENST00000410394 80 ntBASIC15.18■□□□□ 0.02
SCNN1AP37088 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.18■□□□□ 0.02
SCNN1AP37088 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.18■□□□□ 0.02
SCNN1AP37088 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.18■□□□□ 0.02
SCNN1AP37088 RNMTL1P1-201ENST00000454103 560 ntBASIC15.18■□□□□ 0.02
SCNN1AP37088 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.18■□□□□ 0.02
SCNN1AP37088 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.18■□□□□ 0.02
SCNN1AP37088 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.18■□□□□ 0.02
SCNN1AP37088 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.18■□□□□ 0.02
SCNN1AP37088 PGAM1P5-201ENST00000548011 764 ntBASIC15.18■□□□□ 0.02
SCNN1AP37088 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.18■□□□□ 0.02
SCNN1AP37088 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.18■□□□□ 0.02
SCNN1AP37088 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
SCNN1AP37088 AC091271.1-201ENST00000611877 1162 ntBASIC15.18■□□□□ 0.02
SCNN1AP37088 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.18■□□□□ 0.02
SCNN1AP37088 AL136295.7-201ENST00000619226 1200 ntBASIC15.18■□□□□ 0.02
SCNN1AP37088 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 AC004923.1-202ENST00000642106 209 ntBASIC15.18■□□□□ 0.02
SCNN1AP37088 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SCNN1AP37088 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SCNN1AP37088 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.18■□□□□ 0.02
SCNN1AP37088 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.18■□□□□ 0.02
SCNN1AP37088 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCNN1AP37088 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SCNN1AP37088 AC018735.1-201ENST00000437208 1502 ntBASIC15.17■□□□□ 0.02
SCNN1AP37088 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCNN1AP37088 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.17■□□□□ 0.02
SCNN1AP37088 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCNN1AP37088 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCNN1AP37088 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCNN1AP37088 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCNN1AP37088 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.17■□□□□ 0.02
SCNN1AP37088 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCNN1AP37088 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCNN1AP37088 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCNN1AP37088 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.17■□□□□ 0.02
SCNN1AP37088 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCNN1AP37088 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCNN1AP37088 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCNN1AP37088 DPM3-202ENST00000368399 517 ntBASIC15.17■□□□□ 0.02
SCNN1AP37088 AC078875.1-201ENST00000431907 724 ntBASIC15.17■□□□□ 0.02
SCNN1AP37088 OR2R1P-201ENST00000441404 914 ntBASIC15.17■□□□□ 0.02
SCNN1AP37088 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.17■□□□□ 0.02
SCNN1AP37088 PFN1P12-201ENST00000455938 534 ntBASIC15.17■□□□□ 0.02
SCNN1AP37088 SERPINA13P-202ENST00000478994 924 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms