RNA–Protein interactions for RNA: ENST00000394589.8

RAD51D-203, Transcript of RAD51 paralog D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAD51D, Length 2,287 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51D-203ENST00000394589 NISCHQ9Y2I1 1504 aa31.35■■■□□ 2.61
RAD51D-203ENST00000394589 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
RAD51D-203ENST00000394589 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
RAD51D-203ENST00000394589 SHROOM4Q9ULL8 1493 aa26.29■■□□□ 1.8
RAD51D-203ENST00000394589 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
RAD51D-203ENST00000394589 DCAF1Q9Y4B6 1507 aa25.69■■□□□ 1.7
RAD51D-203ENST00000394589 ABCC9O60706 1549 aa25.59■■□□□ 1.69
RAD51D-203ENST00000394589 SUPT5HO00267 1087 aaKnown RBP25.48■■□□□ 1.67
RAD51D-203ENST00000394589 MYO15BQ96JP2 1530 aa25.21■■□□□ 1.63
RAD51D-203ENST00000394589 SCRIBQ14160 1630 aa25.13■■□□□ 1.61
RAD51D-203ENST00000394589 NACADO15069 1562 aa25.06■■□□□ 1.6
RAD51D-203ENST00000394589 CHIC1Q5VXU3 224 aa24.86■■□□□ 1.57
RAD51D-203ENST00000394589 RB1CC1Q8TDY2 1594 aa24.79■■□□□ 1.56
RAD51D-203ENST00000394589 HRCP23327 699 aa24.78■■□□□ 1.56
RAD51D-203ENST00000394589 RSF1Q96T23 1441 aaPredicted RBP24.58■■□□□ 1.53
RAD51D-203ENST00000394589 CECR2Q9BXF3 1484 aa24.54■■□□□ 1.52
RAD51D-203ENST00000394589 PCGF6Q9BYE7 350 aa24.44■■□□□ 1.5
RAD51D-203ENST00000394589 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
RAD51D-203ENST00000394589 MROH2BQ7Z745 1585 aa24.35■■□□□ 1.49
RAD51D-203ENST00000394589 UNC13AQ9UPW8 1703 aa24.33■■□□□ 1.49
RAD51D-203ENST00000394589 BICRAQ9NZM4 1560 aa24.16■■□□□ 1.46
RAD51D-203ENST00000394589 WIZO95785 1651 aa24.14■■□□□ 1.46
RAD51D-203ENST00000394589 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
RAD51D-203ENST00000394589 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
RAD51D-203ENST00000394589 LOC105371045A0A1W2PR82 267 aa24.08■■□□□ 1.44
RAD51D-203ENST00000394589 SMARCA4P51532 1647 aa23.97■■□□□ 1.43
RAD51D-203ENST00000394589 TRIM26Q12899 539 aaPredicted RBP23.96■■□□□ 1.43
RAD51D-203ENST00000394589 TRIM41Q8WV44 630 aa23.77■■□□□ 1.4
RAD51D-203ENST00000394589 TOP2AP11388 1531 aaKnown RBP23.75■■□□□ 1.39
RAD51D-203ENST00000394589 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
RAD51D-203ENST00000394589 ZEB1P37275 1124 aaPredicted RBP23.65■■□□□ 1.38
RAD51D-203ENST00000394589 SMARCA2P51531 1590 aa23.6■■□□□ 1.37
RAD51D-203ENST00000394589 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
RAD51D-203ENST00000394589 FAM9AQ8IZU1 332 aaPredicted RBP23.57■■□□□ 1.36
RAD51D-203ENST00000394589 PEG3Q9GZU2 1588 aa23.56■■□□□ 1.36
RAD51D-203ENST00000394589 EIF4G1Q04637 1599 aaKnown RBP23.49■■□□□ 1.35
RAD51D-203ENST00000394589 BAZ1BQ9UIG0 1483 aaKnown RBP23.46■■□□□ 1.35
RAD51D-203ENST00000394589 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
RAD51D-203ENST00000394589 ABCC8Q09428 1581 aa23.39■■□□□ 1.34
RAD51D-203ENST00000394589 NCAPD3P42695 1498 aa23.24■■□□□ 1.31
RAD51D-203ENST00000394589 PELP1Q8IZL8 1130 aaKnown RBP23.15■■□□□ 1.3
RAD51D-203ENST00000394589 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
RAD51D-203ENST00000394589 WRNQ14191 1432 aaPredicted RBP eCLIP23.1■■□□□ 1.295e-11■■■■■ 40
RAD51D-203ENST00000394589 SOGA1O94964 1423 aa23.08■■□□□ 1.29
RAD51D-203ENST00000394589 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
RAD51D-203ENST00000394589 RUSC2Q8N2Y8 1516 aa23■■□□□ 1.27
RAD51D-203ENST00000394589 CC2D2AQ9P2K1 1620 aa22.99■■□□□ 1.27
RAD51D-203ENST00000394589 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
RAD51D-203ENST00000394589 CSRNP3Q8WYN3 585 aa22.89■■□□□ 1.25
RAD51D-203ENST00000394589 CFTRP13569 1480 aa22.87■■□□□ 1.25
RAD51D-203ENST00000394589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
RAD51D-203ENST00000394589 CCER1Q8TC90 406 aaPredicted RBP22.85■■□□□ 1.25
RAD51D-203ENST00000394589 EEA1Q15075 1411 aa22.8■■□□□ 1.24
RAD51D-203ENST00000394589 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.24
RAD51D-203ENST00000394589 CADPSQ9ULU8 1353 aa22.77■■□□□ 1.24
RAD51D-203ENST00000394589 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
RAD51D-203ENST00000394589 TOP2BQ02880 1626 aa22.73■■□□□ 1.23
RAD51D-203ENST00000394589 ACIN1Q9UKV3 1341 aaKnown RBP22.72■■□□□ 1.23
RAD51D-203ENST00000394589 CEP162Q5TB80 1403 aa22.71■■□□□ 1.23
RAD51D-203ENST00000394589 CUX1P39880 1505 aa22.7■■□□□ 1.22
RAD51D-203ENST00000394589 TNIKQ9UKE5 1360 aa22.68■■□□□ 1.22
RAD51D-203ENST00000394589 DIEXFQ68CQ4 756 aaKnown RBP22.63■■□□□ 1.21
RAD51D-203ENST00000394589 BIVM-ERCC5R4GMW8 1640 aa22.62■■□□□ 1.21
RAD51D-203ENST00000394589 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
RAD51D-203ENST00000394589 NEUROD1Q13562 356 aa22.61■■□□□ 1.21
RAD51D-203ENST00000394589 NESP48681 1621 aa22.6■■□□□ 1.21
RAD51D-203ENST00000394589 CENPBP07199 599 aaPredicted RBP22.55■■□□□ 1.2
RAD51D-203ENST00000394589 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
RAD51D-203ENST00000394589 RAPGEF2Q9Y4G8 1499 aa22.53■■□□□ 1.2
RAD51D-203ENST00000394589 KIF21BO75037 1637 aa22.52■■□□□ 1.2
RAD51D-203ENST00000394589 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
RAD51D-203ENST00000394589 RANGAP1P46060 587 aaPredicted RBP22.51■■□□□ 1.19
RAD51D-203ENST00000394589 TTBK1Q5TCY1 1321 aaPredicted RBP22.47■■□□□ 1.19
RAD51D-203ENST00000394589 PRDM2Q13029 1718 aa22.46■■□□□ 1.19
RAD51D-203ENST00000394589 GTF3C3Q9Y5Q9 886 aa22.43■■□□□ 1.18
RAD51D-203ENST00000394589 KIF27Q86VH2 1401 aa22.43■■□□□ 1.18
RAD51D-203ENST00000394589 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
RAD51D-203ENST00000394589 ZNF316A6NFI3 1004 aaPredicted RBP22.38■■□□□ 1.17
RAD51D-203ENST00000394589 PRXQ9BXM0 1461 aa22.38■■□□□ 1.17
RAD51D-203ENST00000394589 CUX2O14529 1486 aa22.37■■□□□ 1.17
RAD51D-203ENST00000394589 CLIP1P30622 1438 aa22.34■■□□□ 1.17
RAD51D-203ENST00000394589 IGF1RP08069 1367 aa22.3■■□□□ 1.16
RAD51D-203ENST00000394589 RAD54L2Q9Y4B4 1467 aa22.3■■□□□ 1.16
RAD51D-203ENST00000394589 LAMC3Q9Y6N6 1575 aa22.3■■□□□ 1.16
RAD51D-203ENST00000394589 TOPBP1Q92547 1522 aa22.28■■□□□ 1.16
RAD51D-203ENST00000394589 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
RAD51D-203ENST00000394589 DNMBPQ6XZF7 1577 aa22.24■■□□□ 1.15
RAD51D-203ENST00000394589 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
RAD51D-203ENST00000394589 ERICH3Q5RHP9 1530 aa22.23■■□□□ 1.15
RAD51D-203ENST00000394589 URB2Q14146 1524 aaKnown RBP22.23■■□□□ 1.15
RAD51D-203ENST00000394589 VPS8Q8N3P4 1428 aa22.21■■□□□ 1.15
RAD51D-203ENST00000394589 CARMIL1Q5VZK9 1371 aa22.17■■□□□ 1.14
RAD51D-203ENST00000394589 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
RAD51D-203ENST00000394589 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
RAD51D-203ENST00000394589 MYT1Q01538 1121 aa22.11■■□□□ 1.13
RAD51D-203ENST00000394589 TDRD9Q8NDG6 1382 aaKnown RBP22.11■■□□□ 1.13
RAD51D-203ENST00000394589 KIF21AQ7Z4S6 1674 aa22.1■■□□□ 1.13
RAD51D-203ENST00000394589 MIER1Q8N108 512 aa22.07■■□□□ 1.12
RAD51D-203ENST00000394589 ARAP1Q96P48 1450 aa22.05■■□□□ 1.12
RAD51D-203ENST00000394589 YTHDC1Q96MU7 727 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms