RNA–Protein interactions for RNA: ENST00000310611.8

CYB561D1-201, Transcript of cytochrome b561 family member D1, humanhuman

TSL 1 (best) BASIC

Gene CYB561D1, Length 5,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561D1-201ENST00000310611 NISCHQ9Y2I1 1504 aa29.23■■■□□ 2.27
CYB561D1-201ENST00000310611 DCAF8L2P0C7V8 631 aa28.52■■■□□ 2.16
CYB561D1-201ENST00000310611 SHROOM4Q9ULL8 1493 aa26.09■■□□□ 1.77
CYB561D1-201ENST00000310611 ABCC9O60706 1549 aa25.97■■□□□ 1.75
CYB561D1-201ENST00000310611 SUPT5HO00267 1087 aaKnown RBP25.75■■□□□ 1.71
CYB561D1-201ENST00000310611 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.63
CYB561D1-201ENST00000310611 CCDC180Q9P1Z9 1646 aa24.81■■□□□ 1.56
CYB561D1-201ENST00000310611 FAM9AQ8IZU1 332 aaPredicted RBP24.68■■□□□ 1.54
CYB561D1-201ENST00000310611 EHMT2Q96KQ7 1210 aa24.43■■□□□ 1.5
CYB561D1-201ENST00000310611 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.49
CYB561D1-201ENST00000310611 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
CYB561D1-201ENST00000310611 NACADO15069 1562 aa24.11■■□□□ 1.45
CYB561D1-201ENST00000310611 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
CYB561D1-201ENST00000310611 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
CYB561D1-201ENST00000310611 APLP2Q06481 763 aa24.03■■□□□ 1.44
CYB561D1-201ENST00000310611 RANGAP1P46060 587 aaPredicted RBP23.97■■□□□ 1.43
CYB561D1-201ENST00000310611 ATP1B4Q9UN42 357 aaPredicted RBP23.85■■□□□ 1.41
CYB561D1-201ENST00000310611 UBTFP17480 764 aaKnown RBP23.75■■□□□ 1.39
CYB561D1-201ENST00000310611 TTBK1Q5TCY1 1321 aaPredicted RBP23.71■■□□□ 1.39
CYB561D1-201ENST00000310611 FBLN2P98095 1184 aa23.66■■□□□ 1.38
CYB561D1-201ENST00000310611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.52■■□□□ 1.36
CYB561D1-201ENST00000310611 HNRNPUL2Q1KMD3 747 aaKnown RBP23.52■■□□□ 1.36
CYB561D1-201ENST00000310611 DCAF1Q9Y4B6 1507 aa23.42■■□□□ 1.34
CYB561D1-201ENST00000310611 MYT1LQ9UL68 1186 aa23.33■■□□□ 1.33
CYB561D1-201ENST00000310611 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
CYB561D1-201ENST00000310611 BAZ1BQ9UIG0 1483 aaKnown RBP23.23■■□□□ 1.31
CYB561D1-201ENST00000310611 MYO15BQ96JP2 1530 aa23.19■■□□□ 1.3
CYB561D1-201ENST00000310611 CECR2Q9BXF3 1484 aa23.08■■□□□ 1.29
CYB561D1-201ENST00000310611 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
CYB561D1-201ENST00000310611 CHMP7Q8WUX9 453 aaPredicted RBP22.97■■□□□ 1.27
CYB561D1-201ENST00000310611 NPM1P06748 294 aaKnown RBP eCLIP22.96■■□□□ 1.27
CYB561D1-201ENST00000310611 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
CYB561D1-201ENST00000310611 RSF1Q96T23 1441 aaPredicted RBP22.86■■□□□ 1.25
CYB561D1-201ENST00000310611 SMARCA2P51531 1590 aa22.82■■□□□ 1.24
CYB561D1-201ENST00000310611 PDS5BQ9NTI5 1447 aa22.78■■□□□ 1.24
CYB561D1-201ENST00000310611 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
CYB561D1-201ENST00000310611 CSRNP3Q8WYN3 585 aa22.65■■□□□ 1.22
CYB561D1-201ENST00000310611 ARID3CA6NKF2 412 aa22.63■■□□□ 1.21
CYB561D1-201ENST00000310611 ITGAEP38570 1179 aa22.55■■□□□ 1.2
CYB561D1-201ENST00000310611 CDK11AQ9UQ88 783 aaPredicted RBP22.55■■□□□ 1.2
CYB561D1-201ENST00000310611 ATAD2BQ9ULI0 1458 aa22.53■■□□□ 1.2
CYB561D1-201ENST00000310611 MROH2BQ7Z745 1585 aa22.53■■□□□ 1.2
CYB561D1-201ENST00000310611 LOC105371045A0A1W2PR82 267 aa22.52■■□□□ 1.2
CYB561D1-201ENST00000310611 PPARGC1BQ86YN6 1023 aaKnown RBP22.51■■□□□ 1.19
CYB561D1-201ENST00000310611 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
CYB561D1-201ENST00000310611 PCGF6Q9BYE7 350 aa22.48■■□□□ 1.19
CYB561D1-201ENST00000310611 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
CYB561D1-201ENST00000310611 DNAJC5BQ9UF47 199 aa22.45■■□□□ 1.18
CYB561D1-201ENST00000310611 TRHP20396 242 aaPredicted RBP22.43■■□□□ 1.18
CYB561D1-201ENST00000310611 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
CYB561D1-201ENST00000310611 ESF1Q9H501 851 aaKnown RBP22.39■■□□□ 1.17
CYB561D1-201ENST00000310611 FAM50AQ14320 339 aaKnown RBP22.32■■□□□ 1.16
CYB561D1-201ENST00000310611 SMARCA4P51532 1647 aa22.32■■□□□ 1.16
CYB561D1-201ENST00000310611 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
CYB561D1-201ENST00000310611 ZNF777Q9ULD5 760 aaPredicted RBP22.3■■□□□ 1.16
CYB561D1-201ENST00000310611 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
CYB561D1-201ENST00000310611 NCAPD3P42695 1498 aa22.27■■□□□ 1.16
CYB561D1-201ENST00000310611 CC2D2AQ9P2K1 1620 aa22.26■■□□□ 1.15
CYB561D1-201ENST00000310611 CCDC88BA6NC98 1476 aa22.26■■□□□ 1.15
CYB561D1-201ENST00000310611 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
CYB561D1-201ENST00000310611 SOGA1O94964 1423 aa22.2■■□□□ 1.14
CYB561D1-201ENST00000310611 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
CYB561D1-201ENST00000310611 KCNH8Q96L42 1107 aa22.18■■□□□ 1.14
CYB561D1-201ENST00000310611 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
CYB561D1-201ENST00000310611 OSCARQ8IYS5 282 aa22.17■■□□□ 1.14
CYB561D1-201ENST00000310611 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
CYB561D1-201ENST00000310611 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
CYB561D1-201ENST00000310611 WIZO95785 1651 aa22.13■■□□□ 1.13
CYB561D1-201ENST00000310611 CUX2O14529 1486 aa22.13■■□□□ 1.13
CYB561D1-201ENST00000310611 ZEB1P37275 1124 aaPredicted RBP22.12■■□□□ 1.13
CYB561D1-201ENST00000310611 TRIM52Q96A61 297 aa22.08■■□□□ 1.13
CYB561D1-201ENST00000310611 TRIM26Q12899 539 aaPredicted RBP22.08■■□□□ 1.13
CYB561D1-201ENST00000310611 PLEKHD1A6NEE1 506 aa22.08■■□□□ 1.13
CYB561D1-201ENST00000310611 BCANQ96GW7 911 aa22.04■■□□□ 1.12
CYB561D1-201ENST00000310611 ABCC8Q09428 1581 aa22.03■■□□□ 1.12
CYB561D1-201ENST00000310611 BICRAQ9NZM4 1560 aa22.01■■□□□ 1.11
CYB561D1-201ENST00000310611 EEA1Q15075 1411 aa21.98■■□□□ 1.11
CYB561D1-201ENST00000310611 CARMIL1Q5VZK9 1371 aa21.97■■□□□ 1.11
CYB561D1-201ENST00000310611 ARID4BQ4LE39 1312 aaPredicted RBP21.95■■□□□ 1.1
CYB561D1-201ENST00000310611 CYB5RLQ6IPT4 315 aa21.94■■□□□ 1.1
CYB561D1-201ENST00000310611 STAG3Q9UJ98 1225 aa21.9■■□□□ 1.1
CYB561D1-201ENST00000310611 CARMIL2Q6F5E8 1435 aa21.9■■□□□ 1.1
CYB561D1-201ENST00000310611 MTUS2Q5JR59 1369 aa21.87■■□□□ 1.09
CYB561D1-201ENST00000310611 TSPY4P0CV99 314 aa21.87■■□□□ 1.09
CYB561D1-201ENST00000310611 TSPY10P0CW01 314 aa21.87■■□□□ 1.09
CYB561D1-201ENST00000310611 NESP48681 1621 aa21.85■■□□□ 1.09
CYB561D1-201ENST00000310611 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
CYB561D1-201ENST00000310611 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
CYB561D1-201ENST00000310611 JPH4Q96JJ6 628 aa21.77■■□□□ 1.07
CYB561D1-201ENST00000310611 SLC4A1APQ9BWU0 796 aaKnown RBP21.74■■□□□ 1.07
CYB561D1-201ENST00000310611 POLR3GLQ9BT43 218 aa21.74■■□□□ 1.07
CYB561D1-201ENST00000310611 GOLGA3Q08378 1498 aa21.74■■□□□ 1.07
CYB561D1-201ENST00000310611 CLIP1P30622 1438 aa21.73■■□□□ 1.07
CYB561D1-201ENST00000310611 CHGAP10645 457 aaKnown RBP21.73■■□□□ 1.07
CYB561D1-201ENST00000310611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.68■■□□□ 1.06
CYB561D1-201ENST00000310611 CFTRP13569 1480 aa21.66■■□□□ 1.06
CYB561D1-201ENST00000310611 CFDP1Q9UEE9 299 aaPredicted RBP21.64■■□□□ 1.06
CYB561D1-201ENST00000310611 FGD5Q6ZNL6 1462 aa21.61■■□□□ 1.05
CYB561D1-201ENST00000310611 AQRO60306 1485 aaKnown RBP eCLIP21.61■■□□□ 1.05
CYB561D1-201ENST00000310611 GAPVD1Q14C86 1478 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms