RNA–Protein interactions for RNA: ENST00000512127.5

PALLD-215, Transcript of palladin, cytoskeletal associated protein, humanhuman

TSL 2 BASIC

Gene PALLD, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALLD-215ENST00000512127 NISCHQ9Y2I1 1504 aa29.12■■■□□ 2.25
PALLD-215ENST00000512127 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
PALLD-215ENST00000512127 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
PALLD-215ENST00000512127 HRCP23327 699 aa25.94■■□□□ 1.74
PALLD-215ENST00000512127 PPARGC1BQ86YN6 1023 aaKnown RBP25.72■■□□□ 1.71
PALLD-215ENST00000512127 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
PALLD-215ENST00000512127 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.68
PALLD-215ENST00000512127 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
PALLD-215ENST00000512127 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
PALLD-215ENST00000512127 DCAF8L2P0C7V8 631 aa24.81■■□□□ 1.56
PALLD-215ENST00000512127 ZCCHC6Q5VYS8 1495 aaKnown RBP24.74■■□□□ 1.55
PALLD-215ENST00000512127 DCAF1Q9Y4B6 1507 aa24.71■■□□□ 1.55
PALLD-215ENST00000512127 TRIM26Q12899 539 aaPredicted RBP24.64■■□□□ 1.54
PALLD-215ENST00000512127 PELP1Q8IZL8 1130 aaKnown RBP24.6■■□□□ 1.53
PALLD-215ENST00000512127 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
PALLD-215ENST00000512127 CCDC180Q9P1Z9 1646 aa24.4■■□□□ 1.5
PALLD-215ENST00000512127 EHMT2Q96KQ7 1210 aa24.28■■□□□ 1.48
PALLD-215ENST00000512127 ZEB1P37275 1124 aaPredicted RBP24.26■■□□□ 1.47
PALLD-215ENST00000512127 FAM9AQ8IZU1 332 aaPredicted RBP24.18■■□□□ 1.46
PALLD-215ENST00000512127 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
PALLD-215ENST00000512127 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
PALLD-215ENST00000512127 ACIN1Q9UKV3 1341 aaKnown RBP23.92■■□□□ 1.42
PALLD-215ENST00000512127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.87■■□□□ 1.41
PALLD-215ENST00000512127 GTF3C3Q9Y5Q9 886 aa23.85■■□□□ 1.41
PALLD-215ENST00000512127 CCER1Q8TC90 406 aaPredicted RBP23.73■■□□□ 1.39
PALLD-215ENST00000512127 DIEXFQ68CQ4 756 aaKnown RBP23.65■■□□□ 1.38
PALLD-215ENST00000512127 TTBK1Q5TCY1 1321 aaPredicted RBP23.65■■□□□ 1.38
PALLD-215ENST00000512127 CENPBP07199 599 aaPredicted RBP23.6■■□□□ 1.37
PALLD-215ENST00000512127 YTHDC1Q96MU7 727 aaKnown RBP23.51■■□□□ 1.35
PALLD-215ENST00000512127 ABCC9O60706 1549 aa23.51■■□□□ 1.35
PALLD-215ENST00000512127 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
PALLD-215ENST00000512127 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
PALLD-215ENST00000512127 MYT1Q01538 1121 aa23.48■■□□□ 1.35
PALLD-215ENST00000512127 SCRIBQ14160 1630 aa23.29■■□□□ 1.32
PALLD-215ENST00000512127 ZNF316A6NFI3 1004 aaPredicted RBP23.13■■□□□ 1.29
PALLD-215ENST00000512127 MIER1Q8N108 512 aa23.1■■□□□ 1.29
PALLD-215ENST00000512127 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
PALLD-215ENST00000512127 HNRNPUL2Q1KMD3 747 aaKnown RBP22.89■■□□□ 1.26
PALLD-215ENST00000512127 MROH2BQ7Z745 1585 aa22.88■■□□□ 1.25
PALLD-215ENST00000512127 CEP162Q5TB80 1403 aa22.86■■□□□ 1.25
PALLD-215ENST00000512127 WIZO95785 1651 aa22.83■■□□□ 1.24
PALLD-215ENST00000512127 UBTFP17480 764 aaKnown RBP22.79■■□□□ 1.24
PALLD-215ENST00000512127 WRNQ14191 1432 aaPredicted RBP eCLIP22.76■■□□□ 1.23
PALLD-215ENST00000512127 ABCC8Q09428 1581 aa22.76■■□□□ 1.23
PALLD-215ENST00000512127 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
PALLD-215ENST00000512127 SOGA1O94964 1423 aa22.7■■□□□ 1.22
PALLD-215ENST00000512127 SUPT16HQ9Y5B9 1047 aaKnown RBP22.65■■□□□ 1.22
PALLD-215ENST00000512127 RUSC2Q8N2Y8 1516 aa22.59■■□□□ 1.21
PALLD-215ENST00000512127 TNIKQ9UKE5 1360 aa22.58■■□□□ 1.21
PALLD-215ENST00000512127 EIF4G1Q04637 1599 aaKnown RBP22.57■■□□□ 1.2
PALLD-215ENST00000512127 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
PALLD-215ENST00000512127 CSRNP3Q8WYN3 585 aa22.54■■□□□ 1.2
PALLD-215ENST00000512127 TSHZ2Q9NRE2 1034 aa22.53■■□□□ 1.2
PALLD-215ENST00000512127 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
PALLD-215ENST00000512127 BCANQ96GW7 911 aa22.45■■□□□ 1.18
PALLD-215ENST00000512127 ANP32EQ9BTT0 268 aa22.45■■□□□ 1.18
PALLD-215ENST00000512127 BCL11AQ9H165 835 aa22.41■■□□□ 1.18
PALLD-215ENST00000512127 KCNH8Q96L42 1107 aa22.35■■□□□ 1.17
PALLD-215ENST00000512127 GOLGA3Q08378 1498 aa22.34■■□□□ 1.17
PALLD-215ENST00000512127 APLP2Q06481 763 aa22.33■■□□□ 1.17
PALLD-215ENST00000512127 NACADO15069 1562 aa22.33■■□□□ 1.16
PALLD-215ENST00000512127 CLIP1P30622 1438 aa22.26■■□□□ 1.15
PALLD-215ENST00000512127 CLSPNQ9HAW4 1339 aa22.25■■□□□ 1.15
PALLD-215ENST00000512127 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
PALLD-215ENST00000512127 EEA1Q15075 1411 aa22.21■■□□□ 1.15
PALLD-215ENST00000512127 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
PALLD-215ENST00000512127 DHX57Q6P158 1386 aaKnown RBP22.18■■□□□ 1.14
PALLD-215ENST00000512127 FKBP8Q14318 412 aa22.17■■□□□ 1.14
PALLD-215ENST00000512127 VPS8Q8N3P4 1428 aa22.15■■□□□ 1.14
PALLD-215ENST00000512127 ITGAEP38570 1179 aa22.1■■□□□ 1.13
PALLD-215ENST00000512127 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
PALLD-215ENST00000512127 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
PALLD-215ENST00000512127 SMARCA4P51532 1647 aa22.02■■□□□ 1.12
PALLD-215ENST00000512127 KANK4Q5T7N3 995 aaPredicted RBP22.02■■□□□ 1.11
PALLD-215ENST00000512127 RBM19Q9Y4C8 960 aaKnown RBP22.01■■□□□ 1.11
PALLD-215ENST00000512127 DDX10Q13206 875 aaKnown RBP21.97■■□□□ 1.11
PALLD-215ENST00000512127 KIF21BO75037 1637 aa21.96■■□□□ 1.11
PALLD-215ENST00000512127 TRIM52Q96A61 297 aa21.96■■□□□ 1.11
PALLD-215ENST00000512127 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
PALLD-215ENST00000512127 HIRIP3Q9BW71 556 aaPredicted RBP21.93■■□□□ 1.1
PALLD-215ENST00000512127 NEFLP07196 543 aa21.89■■□□□ 1.1
PALLD-215ENST00000512127 MSH5O43196 834 aa21.84■■□□□ 1.09
PALLD-215ENST00000512127 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
PALLD-215ENST00000512127 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
PALLD-215ENST00000512127 SIN3AQ96ST3 1273 aa21.78■■□□□ 1.08
PALLD-215ENST00000512127 IRX6P78412 446 aaPredicted RBP21.77■■□□□ 1.08
PALLD-215ENST00000512127 ARAP1Q96P48 1450 aa21.73■■□□□ 1.07
PALLD-215ENST00000512127 RAB3GAP2Q9H2M9 1393 aa21.71■■□□□ 1.07
PALLD-215ENST00000512127 CCNB3Q8WWL7 1395 aa21.71■■□□□ 1.07
PALLD-215ENST00000512127 RRBP1Q9P2E9 1410 aaKnown RBP21.67■■□□□ 1.06
PALLD-215ENST00000512127 WDR97A6NE52 1622 aa21.67■■□□□ 1.06
PALLD-215ENST00000512127 ERICH6Q7L0X2 663 aa21.66■■□□□ 1.06
PALLD-215ENST00000512127 MAPKBP1O60336 1514 aa21.65■■□□□ 1.06
PALLD-215ENST00000512127 PPP1R15AO75807 674 aaPredicted RBP21.63■■□□□ 1.05
PALLD-215ENST00000512127 ANP32CO43423 234 aa21.62■■□□□ 1.05
PALLD-215ENST00000512127 FAM50AQ14320 339 aaKnown RBP21.56■■□□□ 1.04
PALLD-215ENST00000512127 CUX2O14529 1486 aa21.55■■□□□ 1.04
PALLD-215ENST00000512127 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
PALLD-215ENST00000512127 HNRNPUQ00839 825 aaKnown RBP eCLIP21.52■■□□□ 1.04
PALLD-215ENST00000512127 CDK11AQ9UQ88 783 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms