RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 NISCHQ9Y2I1 1504 aa35.19■■■■□ 3.22
CDPF1-203ENST00000404583 CCDC180Q9P1Z9 1646 aa31.21■■■□□ 2.59
CDPF1-203ENST00000404583 ABCC9O60706 1549 aa30.65■■■□□ 2.5
CDPF1-203ENST00000404583 DCAF8L2P0C7V8 631 aa29.45■■■□□ 2.31
CDPF1-203ENST00000404583 RB1CC1Q8TDY2 1594 aa29.33■■■□□ 2.29
CDPF1-203ENST00000404583 ZCCHC6Q5VYS8 1495 aaKnown RBP29.32■■■□□ 2.28
CDPF1-203ENST00000404583 NACADO15069 1562 aa29.32■■■□□ 2.28
CDPF1-203ENST00000404583 MYO15BQ96JP2 1530 aa29.14■■■□□ 2.26
CDPF1-203ENST00000404583 DCAF1Q9Y4B6 1507 aa29.08■■■□□ 2.25
CDPF1-203ENST00000404583 UNC13AQ9UPW8 1703 aa28.73■■■□□ 2.19
CDPF1-203ENST00000404583 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
CDPF1-203ENST00000404583 PABPN1Q86U42 306 aaKnown RBP eCLIP28.56■■■□□ 2.16
CDPF1-203ENST00000404583 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
CDPF1-203ENST00000404583 BICRAQ9NZM4 1560 aa28.47■■■□□ 2.15
CDPF1-203ENST00000404583 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
CDPF1-203ENST00000404583 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.02
CDPF1-203ENST00000404583 CC2D2AQ9P2K1 1620 aa27.67■■■□□ 2.02
CDPF1-203ENST00000404583 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
CDPF1-203ENST00000404583 SMARCA4P51532 1647 aa27.29■■□□□ 1.96
CDPF1-203ENST00000404583 BAZ1AQ9NRL2 1556 aaPredicted RBP27.25■■□□□ 1.95
CDPF1-203ENST00000404583 MROH2BQ7Z745 1585 aa27.15■■□□□ 1.94
CDPF1-203ENST00000404583 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
CDPF1-203ENST00000404583 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
CDPF1-203ENST00000404583 SMARCA2P51531 1590 aa27.06■■□□□ 1.92
CDPF1-203ENST00000404583 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
CDPF1-203ENST00000404583 HMGXB3Q12766 1538 aa26.92■■□□□ 1.9
CDPF1-203ENST00000404583 BAZ1BQ9UIG0 1483 aaKnown RBP26.88■■□□□ 1.89
CDPF1-203ENST00000404583 WIZO95785 1651 aa26.88■■□□□ 1.89
CDPF1-203ENST00000404583 RSF1Q96T23 1441 aaPredicted RBP26.87■■□□□ 1.89
CDPF1-203ENST00000404583 TOP2AP11388 1531 aaKnown RBP26.55■■□□□ 1.84
CDPF1-203ENST00000404583 NESP48681 1621 aa26.43■■□□□ 1.82
CDPF1-203ENST00000404583 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
CDPF1-203ENST00000404583 SUPT5HO00267 1087 aaKnown RBP26.34■■□□□ 1.81
CDPF1-203ENST00000404583 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.81
CDPF1-203ENST00000404583 CADPSQ9ULU8 1353 aa26.29■■□□□ 1.8
CDPF1-203ENST00000404583 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
CDPF1-203ENST00000404583 CUX2O14529 1486 aa26.24■■□□□ 1.79
CDPF1-203ENST00000404583 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
CDPF1-203ENST00000404583 CFTRP13569 1480 aa26.15■■□□□ 1.78
CDPF1-203ENST00000404583 DNAJC5Q9H3Z4 198 aa26.14■■□□□ 1.77
CDPF1-203ENST00000404583 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
CDPF1-203ENST00000404583 THOC2Q8NI27 1593 aaKnown RBP26.05■■□□□ 1.76
CDPF1-203ENST00000404583 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
CDPF1-203ENST00000404583 PRDM2Q13029 1718 aa25.98■■□□□ 1.75
CDPF1-203ENST00000404583 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
CDPF1-203ENST00000404583 MRC2Q9UBG0 1479 aa25.88■■□□□ 1.73
CDPF1-203ENST00000404583 WDR62O43379 1518 aa25.78■■□□□ 1.72
CDPF1-203ENST00000404583 URB2Q14146 1524 aaKnown RBP25.73■■□□□ 1.71
CDPF1-203ENST00000404583 TOPBP1Q92547 1522 aa25.59■■□□□ 1.69
CDPF1-203ENST00000404583 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
CDPF1-203ENST00000404583 DNMBPQ6XZF7 1577 aa25.56■■□□□ 1.68
CDPF1-203ENST00000404583 CUX1P39880 1505 aa25.45■■□□□ 1.66
CDPF1-203ENST00000404583 POLA1P09884 1462 aaPredicted RBP25.38■■□□□ 1.65
CDPF1-203ENST00000404583 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
CDPF1-203ENST00000404583 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
CDPF1-203ENST00000404583 WRNQ14191 1432 aaPredicted RBP eCLIP25.32■■□□□ 1.64
CDPF1-203ENST00000404583 TARBP1Q13395 1621 aaKnown RBP25.31■■□□□ 1.64
CDPF1-203ENST00000404583 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
CDPF1-203ENST00000404583 ZNF608Q9ULD9 1512 aaPredicted RBP25.3■■□□□ 1.64
CDPF1-203ENST00000404583 SOGA1O94964 1423 aa25.3■■□□□ 1.64
CDPF1-203ENST00000404583 SYNJ1O43426 1573 aa25.26■■□□□ 1.63
CDPF1-203ENST00000404583 TOP2BQ02880 1626 aa25.24■■□□□ 1.63
CDPF1-203ENST00000404583 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
CDPF1-203ENST00000404583 AQRO60306 1485 aaKnown RBP eCLIP25.18■■□□□ 1.62
CDPF1-203ENST00000404583 EIF4G3O43432 1585 aaKnown RBP25.18■■□□□ 1.62
CDPF1-203ENST00000404583 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
CDPF1-203ENST00000404583 TDRD9Q8NDG6 1382 aaKnown RBP25.16■■□□□ 1.62
CDPF1-203ENST00000404583 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
CDPF1-203ENST00000404583 ABCA10Q8WWZ4 1543 aa25.08■■□□□ 1.61
CDPF1-203ENST00000404583 OSCARQ8IYS5 282 aa25.08■■□□□ 1.61
CDPF1-203ENST00000404583 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
CDPF1-203ENST00000404583 ABCA5Q8WWZ7 1642 aa24.98■■□□□ 1.59
CDPF1-203ENST00000404583 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
CDPF1-203ENST00000404583 PBRM1Q86U86 1689 aa24.95■■□□□ 1.58
CDPF1-203ENST00000404583 SNAPC4Q5SXM2 1469 aa24.93■■□□□ 1.58
CDPF1-203ENST00000404583 FBLN2P98095 1184 aa24.88■■□□□ 1.57
CDPF1-203ENST00000404583 CHD1O14646 1710 aa24.87■■□□□ 1.57
CDPF1-203ENST00000404583 MAGI1Q96QZ7 1491 aaPredicted RBP24.87■■□□□ 1.57
CDPF1-203ENST00000404583 RIMBP3CA6NJZ7 1639 aa24.84■■□□□ 1.57
CDPF1-203ENST00000404583 RIMBP3BA6NNM3 1639 aa24.84■■□□□ 1.57
CDPF1-203ENST00000404583 RIMBP3Q9UFD9 1639 aa24.84■■□□□ 1.57
CDPF1-203ENST00000404583 CHMP7Q8WUX9 453 aaPredicted RBP24.8■■□□□ 1.56
CDPF1-203ENST00000404583 ERICH3Q5RHP9 1530 aa24.78■■□□□ 1.56
CDPF1-203ENST00000404583 SYNJ2O15056 1496 aa24.78■■□□□ 1.56
CDPF1-203ENST00000404583 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
CDPF1-203ENST00000404583 ARHGEF11O15085 1522 aa24.74■■□□□ 1.55
CDPF1-203ENST00000404583 ADAMTS12P58397 1594 aa24.73■■□□□ 1.55
CDPF1-203ENST00000404583 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.54
CDPF1-203ENST00000404583 IGF1RP08069 1367 aa24.69■■□□□ 1.54
CDPF1-203ENST00000404583 GRIN2AQ12879 1464 aa24.65■■□□□ 1.54
CDPF1-203ENST00000404583 RUSC2Q8N2Y8 1516 aa24.65■■□□□ 1.54
CDPF1-203ENST00000404583 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
CDPF1-203ENST00000404583 CUL7Q14999 1698 aa24.58■■□□□ 1.53
CDPF1-203ENST00000404583 CYB5RLQ6IPT4 315 aa24.57■■□□□ 1.52
CDPF1-203ENST00000404583 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
CDPF1-203ENST00000404583 CARMIL1Q5VZK9 1371 aa24.54■■□□□ 1.52
CDPF1-203ENST00000404583 CEP170Q5SW79 1584 aa24.53■■□□□ 1.52
CDPF1-203ENST00000404583 NUP160Q12769 1436 aa24.52■■□□□ 1.52
CDPF1-203ENST00000404583 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
CDPF1-203ENST00000404583 RAPGEF2Q9Y4G8 1499 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms