Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.81■■■■□ 3.32
SCNN1AP37088 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
SCNN1AP37088 AL356512.1-201ENST00000607453 1739 ntBASIC34.93■■■■□ 3.18
SCNN1AP37088 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.87■■■■□ 3.17
SCNN1AP37088 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
SCNN1AP37088 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
SCNN1AP37088 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.57■■■■□ 3.12
SCNN1AP37088 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.27■■■■□ 3.08
SCNN1AP37088 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.2■■■■□ 3.07
SCNN1AP37088 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.07■■■■□ 3.05
SCNN1AP37088 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.96■■■■□ 3.03
SCNN1AP37088 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.88■■■■□ 3.01
SCNN1AP37088 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.52■■■□□ 2.96
SCNN1AP37088 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.49■■■□□ 2.95
SCNN1AP37088 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
SCNN1AP37088 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.12■■■□□ 2.89
SCNN1AP37088 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
SCNN1AP37088 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.92■■■□□ 2.86
SCNN1AP37088 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.92■■■□□ 2.86
SCNN1AP37088 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.88■■■□□ 2.85
SCNN1AP37088 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
SCNN1AP37088 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
SCNN1AP37088 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.68■■■□□ 2.82
SCNN1AP37088 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
SCNN1AP37088 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.62■■■□□ 2.81
SCNN1AP37088 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.59■■■□□ 2.81
SCNN1AP37088 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
SCNN1AP37088 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SCNN1AP37088 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
SCNN1AP37088 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
SCNN1AP37088 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SCNN1AP37088 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SCNN1AP37088 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.02■■■□□ 2.72
SCNN1AP37088 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SCNN1AP37088 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32■■■□□ 2.71
SCNN1AP37088 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SCNN1AP37088 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.96■■■□□ 2.71
SCNN1AP37088 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SCNN1AP37088 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SCNN1AP37088 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SCNN1AP37088 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SCNN1AP37088 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SCNN1AP37088 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SCNN1AP37088 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
SCNN1AP37088 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SCNN1AP37088 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
SCNN1AP37088 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.65■■■□□ 2.66
SCNN1AP37088 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
SCNN1AP37088 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
SCNN1AP37088 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.56■■■□□ 2.64
SCNN1AP37088 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.47■■■□□ 2.63
SCNN1AP37088 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SCNN1AP37088 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
SCNN1AP37088 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.38■■■□□ 2.61
SCNN1AP37088 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SCNN1AP37088 AC015813.7-201ENST00000623294 581 ntBASIC31.31■■■□□ 2.6
SCNN1AP37088 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
SCNN1AP37088 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SCNN1AP37088 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SCNN1AP37088 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SCNN1AP37088 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
SCNN1AP37088 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.01■■■□□ 2.56
SCNN1AP37088 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31■■■□□ 2.55
SCNN1AP37088 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.97■■■□□ 2.55
SCNN1AP37088 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.97■■■□□ 2.55
SCNN1AP37088 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SCNN1AP37088 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.95■■■□□ 2.54
SCNN1AP37088 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SCNN1AP37088 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
SCNN1AP37088 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
SCNN1AP37088 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SCNN1AP37088 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SCNN1AP37088 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SCNN1AP37088 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.9■■■□□ 2.54
SCNN1AP37088 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.89■■■□□ 2.54
SCNN1AP37088 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
SCNN1AP37088 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SCNN1AP37088 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SCNN1AP37088 AC006077.2-201ENST00000623591 457 ntBASIC30.75■■■□□ 2.51
SCNN1AP37088 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
SCNN1AP37088 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
SCNN1AP37088 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SCNN1AP37088 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SCNN1AP37088 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
SCNN1AP37088 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SCNN1AP37088 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SCNN1AP37088 ZNRF2P1-201ENST00000441407 443 ntBASIC30.56■■■□□ 2.48
SCNN1AP37088 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SCNN1AP37088 AC145285.7-201ENST00000614819 1539 ntBASIC30.52■■■□□ 2.48
SCNN1AP37088 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SCNN1AP37088 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SCNN1AP37088 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SCNN1AP37088 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
SCNN1AP37088 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.45■■■□□ 2.47
SCNN1AP37088 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
SCNN1AP37088 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SCNN1AP37088 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SCNN1AP37088 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.32■■■□□ 2.44
SCNN1AP37088 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.26■■■□□ 2.43
SCNN1AP37088 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms