RNA–Protein interactions for RNA: ENST00000357052.7

RAB4B-201, Transcript of RAB4B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB4B, Length 1,133 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-201ENST00000357052 NISCHQ9Y2I1 1504 aa36.84■■■■□ 3.49
RAB4B-201ENST00000357052 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
RAB4B-201ENST00000357052 ABCC9O60706 1549 aa32.95■■■□□ 2.87
RAB4B-201ENST00000357052 RB1CC1Q8TDY2 1594 aa31.39■■■□□ 2.61
RAB4B-201ENST00000357052 NACADO15069 1562 aa31.2■■■□□ 2.58
RAB4B-201ENST00000357052 DCAF8L2P0C7V8 631 aa31.15■■■□□ 2.58
RAB4B-201ENST00000357052 DNAJC5BQ9UF47 199 aa30.83■■■□□ 2.53
RAB4B-201ENST00000357052 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
RAB4B-201ENST00000357052 PABPN1Q86U42 306 aaKnown RBP eCLIP30.73■■■□□ 2.51
RAB4B-201ENST00000357052 UNC13AQ9UPW8 1703 aa30.62■■■□□ 2.49
RAB4B-201ENST00000357052 ZCCHC6Q5VYS8 1495 aaKnown RBP30.54■■■□□ 2.48
RAB4B-201ENST00000357052 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
RAB4B-201ENST00000357052 DCAF1Q9Y4B6 1507 aa30.42■■■□□ 2.46
RAB4B-201ENST00000357052 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
RAB4B-201ENST00000357052 SHROOM4Q9ULL8 1493 aa30.06■■■□□ 2.4
RAB4B-201ENST00000357052 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
RAB4B-201ENST00000357052 EIF4G1Q04637 1599 aaKnown RBP29.7■■■□□ 2.35
RAB4B-201ENST00000357052 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
RAB4B-201ENST00000357052 NCAPD3P42695 1498 aa28.8■■■□□ 2.2
RAB4B-201ENST00000357052 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
RAB4B-201ENST00000357052 SMARCA4P51532 1647 aa28.7■■■□□ 2.19
RAB4B-201ENST00000357052 SMARCA2P51531 1590 aa28.66■■■□□ 2.18
RAB4B-201ENST00000357052 BAZ1AQ9NRL2 1556 aaPredicted RBP28.59■■■□□ 2.17
RAB4B-201ENST00000357052 HMGXB3Q12766 1538 aa28.58■■■□□ 2.17
RAB4B-201ENST00000357052 BAZ1BQ9UIG0 1483 aaKnown RBP28.47■■■□□ 2.15
RAB4B-201ENST00000357052 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
RAB4B-201ENST00000357052 PEG3Q9GZU2 1588 aa28.41■■■□□ 2.14
RAB4B-201ENST00000357052 MROH2BQ7Z745 1585 aa28.38■■■□□ 2.13
RAB4B-201ENST00000357052 CUX2O14529 1486 aa28.35■■■□□ 2.13
RAB4B-201ENST00000357052 NESP48681 1621 aa28.32■■■□□ 2.12
RAB4B-201ENST00000357052 DNAJC5Q9H3Z4 198 aa28.27■■■□□ 2.12
RAB4B-201ENST00000357052 LAMC3Q9Y6N6 1575 aa28.12■■■□□ 2.09
RAB4B-201ENST00000357052 WIZO95785 1651 aa28.03■■■□□ 2.08
RAB4B-201ENST00000357052 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.07
RAB4B-201ENST00000357052 THOC2Q8NI27 1593 aaKnown RBP27.98■■■□□ 2.07
RAB4B-201ENST00000357052 CADPSQ9ULU8 1353 aa27.96■■■□□ 2.07
RAB4B-201ENST00000357052 KIF21AQ7Z4S6 1674 aa27.92■■■□□ 2.06
RAB4B-201ENST00000357052 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
RAB4B-201ENST00000357052 MRC2Q9UBG0 1479 aa27.73■■■□□ 2.03
RAB4B-201ENST00000357052 TOP2AP11388 1531 aaKnown RBP27.7■■■□□ 2.02
RAB4B-201ENST00000357052 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.02
RAB4B-201ENST00000357052 WDR62O43379 1518 aa27.64■■■□□ 2.02
RAB4B-201ENST00000357052 CFTRP13569 1480 aa27.64■■■□□ 2.01
RAB4B-201ENST00000357052 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
RAB4B-201ENST00000357052 CCDC88BA6NC98 1476 aa27.4■■□□□ 1.98
RAB4B-201ENST00000357052 URB2Q14146 1524 aaKnown RBP27.37■■□□□ 1.97
RAB4B-201ENST00000357052 PRDM2Q13029 1718 aa27.32■■□□□ 1.96
RAB4B-201ENST00000357052 OSCARQ8IYS5 282 aa27.13■■□□□ 1.93
RAB4B-201ENST00000357052 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
RAB4B-201ENST00000357052 IFT140Q96RY7 1462 aa27.1■■□□□ 1.93
RAB4B-201ENST00000357052 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
RAB4B-201ENST00000357052 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
RAB4B-201ENST00000357052 ZNF608Q9ULD9 1512 aaPredicted RBP27.03■■□□□ 1.92
RAB4B-201ENST00000357052 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.91
RAB4B-201ENST00000357052 EIF4G3O43432 1585 aaKnown RBP26.86■■□□□ 1.89
RAB4B-201ENST00000357052 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
RAB4B-201ENST00000357052 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
RAB4B-201ENST00000357052 AQRO60306 1485 aaKnown RBP eCLIP26.81■■□□□ 1.882e-6■■□□□ 13
RAB4B-201ENST00000357052 SUPT5HO00267 1087 aaKnown RBP26.75■■□□□ 1.87
RAB4B-201ENST00000357052 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
RAB4B-201ENST00000357052 SOGA1O94964 1423 aa26.74■■□□□ 1.87
RAB4B-201ENST00000357052 RIMBP3CA6NJZ7 1639 aa26.69■■□□□ 1.86
RAB4B-201ENST00000357052 RIMBP3BA6NNM3 1639 aa26.69■■□□□ 1.86
RAB4B-201ENST00000357052 RIMBP3Q9UFD9 1639 aa26.69■■□□□ 1.86
RAB4B-201ENST00000357052 TDRD9Q8NDG6 1382 aaKnown RBP26.68■■□□□ 1.86
RAB4B-201ENST00000357052 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
RAB4B-201ENST00000357052 FBLN2P98095 1184 aa26.67■■□□□ 1.86
RAB4B-201ENST00000357052 CUX1P39880 1505 aa26.65■■□□□ 1.86
RAB4B-201ENST00000357052 CHD1O14646 1710 aa26.64■■□□□ 1.85
RAB4B-201ENST00000357052 ARHGEF11O15085 1522 aa26.64■■□□□ 1.85
RAB4B-201ENST00000357052 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
RAB4B-201ENST00000357052 SNAPC4Q5SXM2 1469 aa26.53■■□□□ 1.84
RAB4B-201ENST00000357052 GRIN2BQ13224 1484 aa26.49■■□□□ 1.83
RAB4B-201ENST00000357052 CYB5RLQ6IPT4 315 aa26.49■■□□□ 1.83
RAB4B-201ENST00000357052 CHMP7Q8WUX9 453 aaPredicted RBP26.48■■□□□ 1.83
RAB4B-201ENST00000357052 MAGI1Q96QZ7 1491 aaPredicted RBP26.47■■□□□ 1.83
RAB4B-201ENST00000357052 GAPVD1Q14C86 1478 aa26.41■■□□□ 1.82
RAB4B-201ENST00000357052 ABCA10Q8WWZ4 1543 aa26.39■■□□□ 1.81
RAB4B-201ENST00000357052 SYNJ2O15056 1496 aa26.38■■□□□ 1.81
RAB4B-201ENST00000357052 ARAP1Q96P48 1450 aa26.37■■□□□ 1.81
RAB4B-201ENST00000357052 SYNJ1O43426 1573 aa26.37■■□□□ 1.81
RAB4B-201ENST00000357052 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
RAB4B-201ENST00000357052 CLASP1Q7Z460 1538 aa26.34■■□□□ 1.81
RAB4B-201ENST00000357052 WRNQ14191 1432 aaPredicted RBP eCLIP26.32■■□□□ 1.8
RAB4B-201ENST00000357052 ABCA5Q8WWZ7 1642 aa26.31■■□□□ 1.8
RAB4B-201ENST00000357052 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
RAB4B-201ENST00000357052 BIVM-ERCC5R4GMW8 1640 aa26.24■■□□□ 1.79
RAB4B-201ENST00000357052 TRHP20396 242 aaPredicted RBP26.18■■□□□ 1.78
RAB4B-201ENST00000357052 GRIN2AQ12879 1464 aa26.13■■□□□ 1.77
RAB4B-201ENST00000357052 ADAMTS12P58397 1594 aa26.11■■□□□ 1.77
RAB4B-201ENST00000357052 FHAD1B1AJZ9 1412 aa26.08■■□□□ 1.77
RAB4B-201ENST00000357052 ERICH3Q5RHP9 1530 aa26.05■■□□□ 1.76
RAB4B-201ENST00000357052 NUP160Q12769 1436 aa26.04■■□□□ 1.76
RAB4B-201ENST00000357052 CEP170Q5SW79 1584 aa26.01■■□□□ 1.75
RAB4B-201ENST00000357052 ERCC6L2Q5T890 1561 aa25.95■■□□□ 1.74
RAB4B-201ENST00000357052 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
RAB4B-201ENST00000357052 JPH4Q96JJ6 628 aa25.82■■□□□ 1.72
RAB4B-201ENST00000357052 PRG4Q92954 1404 aaPredicted RBP25.8■■□□□ 1.72
RAB4B-201ENST00000357052 KIF27Q86VH2 1401 aa25.8■■□□□ 1.72
RAB4B-201ENST00000357052 IGF1RP08069 1367 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms