Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 RBM6-209ENST00000441115 1876 ntTSL 221.23■□□□□ 0.994e-8■■□□□ 12.8
U2AF2P26368 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.68■□□□□ 0.744e-8■■□□□ 12.8
U2AF2P26368 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.374e-8■■□□□ 12.8
U2AF2P26368 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC16.12■□□□□ 0.174e-8■■□□□ 12.8
U2AF2P26368 RBM6-213ENST00000454079 4324 ntTSL 213.56□□□□□ -0.244e-8■■□□□ 12.8
U2AF2P26368 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.343e-7■■□□□ 12.8
U2AF2P26368 ZFAND1-206ENST00000519338 891 ntTSL 34.14□□□□□ -1.758e-7■■□□□ 12.8
U2AF2P26368 GUSBP11-201ENST00000422506 2055 ntTSL 225.12■■□□□ 1.619e-7■■□□□ 12.8
U2AF2P26368 GUSBP11-205ENST00000452737 1662 ntTSL 1 (best)24.93■■□□□ 1.589e-7■■□□□ 12.8
U2AF2P26368 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.25■□□□□ 0.839e-7■■□□□ 12.8
U2AF2P26368 GUSBP11-204ENST00000451837 3234 ntTSL 1 (best)17.54■□□□□ 0.49e-7■■□□□ 12.8
U2AF2P26368 GUSBP11-203ENST00000445682 3350 ntTSL 217.31■□□□□ 0.369e-7■■□□□ 12.8
U2AF2P26368 AP000347.2-203ENST00000434893 403 ntTSL 217.29■□□□□ 0.369e-7■■□□□ 12.8
U2AF2P26368 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC16.52■□□□□ 0.249e-7■■□□□ 12.8
U2AF2P26368 AP000347.2-201ENST00000423913 584 ntTSL 512.38□□□□□ -0.439e-7■■□□□ 12.8
U2AF2P26368 KDM3A-212ENST00000485171 556 ntTSL 45.8□□□□□ -1.481e-7■■□□□ 12.8
U2AF2P26368 VDAC3-203ENST00000518563 719 ntTSL 229.26■■■□□ 2.271e-7■■□□□ 12.8
U2AF2P26368 TRAPPC11-204ENST00000505676 2244 ntTSL 1 (best)20.04■□□□□ 0.81e-7■■□□□ 12.8
U2AF2P26368 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.661e-7■■□□□ 12.8
U2AF2P26368 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.84■□□□□ 0.451e-7■■□□□ 12.8
U2AF2P26368 VDAC3-204ENST00000519072 1123 ntTSL 1 (best)14.95□□□□□ -0.021e-7■■□□□ 12.8
U2AF2P26368 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.95□□□□□ -0.021e-7■■□□□ 12.8
U2AF2P26368 VDAC3-205ENST00000520115 580 ntTSL 414.69□□□□□ -0.061e-7■■□□□ 12.8
U2AF2P26368 VDAC3-207ENST00000521348 784 ntTSL 513.99□□□□□ -0.171e-7■■□□□ 12.8
U2AF2P26368 TAF1-202ENST00000373775 2199 ntTSL 511.57□□□□□ -0.561e-7■■□□□ 12.8
U2AF2P26368 VDAC3-209ENST00000522069 625 ntTSL 511.41□□□□□ -0.581e-7■■□□□ 12.8
U2AF2P26368 TAF1-205ENST00000437147 2295 ntTSL 1 (best)11.3□□□□□ -0.61e-7■■□□□ 12.8
U2AF2P26368 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.985e-8■■□□□ 12.8
U2AF2P26368 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.015e-8■■□□□ 12.8
U2AF2P26368 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.055e-8■■□□□ 12.8
U2AF2P26368 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.091e-7■■□□□ 12.8
U2AF2P26368 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.32□□□□□ -1.41e-7■■□□□ 12.8
U2AF2P26368 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.441e-7■■□□□ 12.8
U2AF2P26368 VDAC3-202ENST00000518495 531 ntTSL 35.41□□□□□ -1.541e-7■■□□□ 12.8
U2AF2P26368 TRAPPC11-208ENST00000511955 2342 ntTSL 25.37□□□□□ -1.551e-7■■□□□ 12.8
U2AF2P26368 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.31□□□□□ -1.561e-7■■□□□ 12.8
U2AF2P26368 VDAC3-208ENST00000522010 631 ntTSL 54.02□□□□□ -1.771e-7■■□□□ 12.8
U2AF2P26368 CLK1-214ENST00000496205 480 ntTSL 22.83□□□□□ -1.961e-7■■□□□ 12.8
U2AF2P26368 CDK12-208ENST00000584336 1963 nt12.05□□□□□ -0.482e-8■■□□□ 12.8
U2AF2P26368 AL359504.2-201ENST00000605506 1601 ntBASIC28.13■■■□□ 2.093e-7■■□□□ 12.8
U2AF2P26368 MAD1L1-213ENST00000455998 557 ntTSL 422.63■■□□□ 1.213e-7■■□□□ 12.8
U2AF2P26368 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.07■■□□□ 1.123e-7■■□□□ 12.8
U2AF2P26368 MAD1L1-207ENST00000429779 555 ntTSL 421.77■■□□□ 1.083e-7■■□□□ 12.8
U2AF2P26368 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.073e-7■■□□□ 12.8
U2AF2P26368 ARMCX3-206ENST00000491568 973 ntTSL 1 (best)20.09■□□□□ 0.813e-7■■□□□ 12.8
U2AF2P26368 BAG6-257ENST00000462875 972 ntTSL 219.87■□□□□ 0.773e-7■■□□□ 12.8
U2AF2P26368 IFRD2-214ENST00000489569 1036 ntTSL 519.55■□□□□ 0.723e-7■■□□□ 12.8
U2AF2P26368 IFRD2-210ENST00000474556 1812 ntTSL 519.43■□□□□ 0.73e-7■■□□□ 12.8
U2AF2P26368 ARMCX3-205ENST00000479298 637 ntTSL 518.15■□□□□ 0.53e-7■■□□□ 12.8
U2AF2P26368 SDHAP3-202ENST00000515467 728 ntBASIC17.96■□□□□ 0.472e-13■■□□□ 12.8
U2AF2P26368 IFRD2-201ENST00000414734 1137 ntTSL 216.68■□□□□ 0.263e-7■■□□□ 12.8
U2AF2P26368 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.243e-7■■□□□ 12.8
U2AF2P26368 VAC14-206ENST00000564685 892 ntTSL 1 (best)15.75■□□□□ 0.113e-7■■□□□ 12.8
U2AF2P26368 GGA3-215ENST00000582821 1018 ntTSL 215.7■□□□□ 0.13e-7■■□□□ 12.8
U2AF2P26368 SEC23B-205ENST00000422877 834 ntTSL 315.65■□□□□ 0.13e-7■■□□□ 12.8
U2AF2P26368 LIMK2-208ENST00000467301 607 ntTSL 315.02■□□□□ -03e-7■■□□□ 12.8
U2AF2P26368 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.136e-10■■□□□ 12.8
U2AF2P26368 ARMCX3-201ENST00000341189 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.23e-7■■□□□ 12.8
U2AF2P26368 THRAP3-201ENST00000354618 4432 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.266e-10■■□□□ 12.8
U2AF2P26368 IFRD2-205ENST00000438296 917 ntTSL 513.11□□□□□ -0.313e-7■■□□□ 12.8
U2AF2P26368 VAC14-203ENST00000561879 432 ntTSL 212.12□□□□□ -0.473e-7■■□□□ 12.8
U2AF2P26368 ARMCX3-202ENST00000467808 506 ntTSL 211.98□□□□□ -0.493e-7■■□□□ 12.8
U2AF2P26368 PSMA5-204ENST00000490870 1667 ntTSL 1 (best)11.82□□□□□ -0.523e-7■■□□□ 12.8
U2AF2P26368 GGA3-210ENST00000580799 521 ntTSL 511.23□□□□□ -0.613e-7■■□□□ 12.8
U2AF2P26368 VAC14-204ENST00000563662 554 ntTSL 311.19□□□□□ -0.623e-7■■□□□ 12.8
U2AF2P26368 VAC14-207ENST00000566416 780 ntTSL 310.67□□□□□ -0.73e-7■■□□□ 12.8
U2AF2P26368 MYO19-209ENST00000612097 580 ntTSL 510.54□□□□□ -0.722e-6■■□□□ 12.8
U2AF2P26368 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.763e-7■■□□□ 12.8
U2AF2P26368 IFRD2-211ENST00000483071 694 ntTSL 310.09□□□□□ -0.793e-7■■□□□ 12.8
U2AF2P26368 LIMK2-209ENST00000482270 805 ntTSL 29.91□□□□□ -0.823e-7■■□□□ 12.8
U2AF2P26368 POLR2B-212ENST00000510355 581 ntTSL 38.34□□□□□ -1.073e-7■■□□□ 12.8
U2AF2P26368 TRIM25-206ENST00000572550 519 ntTSL 57.19□□□□□ -1.268e-8■■□□□ 12.8
U2AF2P26368 TRIM25-209ENST00000574997 440 ntTSL 37.08□□□□□ -1.288e-8■■□□□ 12.8
U2AF2P26368 DOCK5-209ENST00000481728 780 ntTSL 56.32□□□□□ -1.43e-7■■□□□ 12.8
U2AF2P26368 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.733e-7■■□□□ 12.8
U2AF2P26368 PAWR-209ENST00000550603 482 ntTSL 51.95□□□□□ -2.13e-7■■□□□ 12.8
U2AF2P26368 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC14.72□□□□□ -0.057e-7■■□□□ 12.8
U2AF2P26368 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC9.03□□□□□ -0.967e-7■■□□□ 12.8
U2AF2P26368 NOSTRIN-205ENST00000439509 584 ntTSL 38.06□□□□□ -1.127e-7■■□□□ 12.8
U2AF2P26368 NOSTRIN-208ENST00000447264 794 ntTSL 58.06□□□□□ -1.127e-7■■□□□ 12.8
U2AF2P26368 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.7□□□□□ -1.187e-7■■□□□ 12.8
U2AF2P26368 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.327e-7■■□□□ 12.8
U2AF2P26368 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.78□□□□□ -1.327e-7■■□□□ 12.8
U2AF2P26368 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.15□□□□□ -1.437e-7■■□□□ 12.8
U2AF2P26368 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.138e-9■■□□□ 12.8
U2AF2P26368 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC15.63■□□□□ 0.098e-9■■□□□ 12.8
U2AF2P26368 FAM13B-202ENST00000420893 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.278e-9■■□□□ 12.8
U2AF2P26368 TFRC-209ENST00000464368 569 ntTSL 410.65□□□□□ -0.73e-7■■□□□ 12.8
U2AF2P26368 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.841e-8■■□□□ 12.8
U2AF2P26368 A2M-213ENST00000546069 593 ntTSL 57.84□□□□□ -1.151e-14■■□□□ 12.8
U2AF2P26368 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.92■□□□□ 0.622e-7■■□□□ 12.8
U2AF2P26368 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.182e-7■■□□□ 12.8
U2AF2P26368 CCT2-210ENST00000550638 683 ntTSL 211.26□□□□□ -0.612e-7■■□□□ 12.8
U2AF2P26368 CCT2-212ENST00000551620 776 ntTSL 211.26□□□□□ -0.612e-7■■□□□ 12.8
U2AF2P26368 CCT2-203ENST00000544368 1728 ntTSL 5 BASIC11.01□□□□□ -0.652e-7■■□□□ 12.8
U2AF2P26368 CCT2-205ENST00000546859 595 ntTSL 210.25□□□□□ -0.772e-7■■□□□ 12.8
U2AF2P26368 CCT2-208ENST00000550010 1754 ntTSL 59.76□□□□□ -0.852e-7■■□□□ 12.8
U2AF2P26368 ZNF518A-205ENST00000488700 729 ntTSL 219.14■□□□□ 0.654e-8■■□□□ 12.8
U2AF2P26368 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.914e-8■■□□□ 12.8
U2AF2P26368 ZNF518A-208ENST00000563195 1594 ntTSL 38.61□□□□□ -1.034e-8■■□□□ 12.8
Retrieved 100 of 36,523 protein–RNA pairs in 182.2 ms