RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 PELP1Q8IZL8 1130 aaKnown RBP18.21■□□□□ 0.51
USP31-201ENST00000219689 MYT1Q01538 1121 aa18.14■□□□□ 0.49
USP31-201ENST00000219689 ERICH6Q7L0X2 663 aa17.65■□□□□ 0.42
USP31-201ENST00000219689 CENPBP07199 599 aaPredicted RBP17.43■□□□□ 0.38
USP31-201ENST00000219689 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
USP31-201ENST00000219689 PCGF6Q9BYE7 350 aa17.37■□□□□ 0.37
USP31-201ENST00000219689 SUPT5HO00267 1087 aaKnown RBP17.36■□□□□ 0.37
USP31-201ENST00000219689 CCER1Q8TC90 406 aaPredicted RBP17.25■□□□□ 0.35
USP31-201ENST00000219689 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
USP31-201ENST00000219689 YTHDC1Q96MU7 727 aaKnown RBP17.08■□□□□ 0.32
USP31-201ENST00000219689 TTBK1Q5TCY1 1321 aaPredicted RBP17.06■□□□□ 0.32
USP31-201ENST00000219689 ZEB1P37275 1124 aaPredicted RBP16.97■□□□□ 0.31
USP31-201ENST00000219689 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
USP31-201ENST00000219689 NEFLP07196 543 aa16.85■□□□□ 0.29
USP31-201ENST00000219689 HRCP23327 699 aa16.7■□□□□ 0.26
USP31-201ENST00000219689 APLP2Q06481 763 aa16.58■□□□□ 0.24
USP31-201ENST00000219689 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
USP31-201ENST00000219689 DAXXQ9UER7 740 aaPredicted RBP16.47■□□□□ 0.23
USP31-201ENST00000219689 FAM9AQ8IZU1 332 aaPredicted RBP16.47■□□□□ 0.23
USP31-201ENST00000219689 RTL5Q5HYW3 569 aaPredicted RBP16.43■□□□□ 0.22
USP31-201ENST00000219689 GTF3C3Q9Y5Q9 886 aa16.33■□□□□ 0.2
USP31-201ENST00000219689 TRIM26Q12899 539 aaPredicted RBP16.25■□□□□ 0.19
USP31-201ENST00000219689 EIF5BO60841 1220 aaKnown RBP16.17■□□□□ 0.18
USP31-201ENST00000219689 ZNF316A6NFI3 1004 aaPredicted RBP16.16■□□□□ 0.18
USP31-201ENST00000219689 DIEXFQ68CQ4 756 aaKnown RBP16.14■□□□□ 0.17
USP31-201ENST00000219689 BCANQ96GW7 911 aa16.11■□□□□ 0.17
USP31-201ENST00000219689 RANGAP1P46060 587 aaPredicted RBP16.09■□□□□ 0.17
USP31-201ENST00000219689 NISCHQ9Y2I1 1504 aa16.03■□□□□ 0.16
USP31-201ENST00000219689 GLIPR1L2Q4G1C9 344 aa15.96■□□□□ 0.15
USP31-201ENST00000219689 ACIN1Q9UKV3 1341 aaKnown RBP15.96■□□□□ 0.15
USP31-201ENST00000219689 CDK11AQ9UQ88 783 aaPredicted RBP15.89■□□□□ 0.14
USP31-201ENST00000219689 TRIM41Q8WV44 630 aa15.89■□□□□ 0.13
USP31-201ENST00000219689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
USP31-201ENST00000219689 SCAF1Q9H7N4 1312 aaKnown RBP15.82■□□□□ 0.12
USP31-201ENST00000219689 ATP1B4Q9UN42 357 aaPredicted RBP15.79■□□□□ 0.12
USP31-201ENST00000219689 CNGB1Q14028 1251 aaPredicted RBP15.79■□□□□ 0.12
USP31-201ENST00000219689 CLSPNQ9HAW4 1339 aa15.79■□□□□ 0.12
USP31-201ENST00000219689 UBTFP17480 764 aaKnown RBP15.78■□□□□ 0.12
USP31-201ENST00000219689 POLR3GLQ9BT43 218 aa15.77■□□□□ 0.12
USP31-201ENST00000219689 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
USP31-201ENST00000219689 NBR1Q14596 966 aa15.72■□□□□ 0.11
USP31-201ENST00000219689 BCL11AQ9H165 835 aa15.71■□□□□ 0.11
USP31-201ENST00000219689 ANP32AP39687 249 aaKnown RBP15.67■□□□□ 0.1
USP31-201ENST00000219689 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
USP31-201ENST00000219689 NPM2Q86SE8 214 aaKnown RBP15.61■□□□□ 0.09
USP31-201ENST00000219689 MYT1LQ9UL68 1186 aa15.59■□□□□ 0.09
USP31-201ENST00000219689 ITGAEP38570 1179 aa15.59■□□□□ 0.09
USP31-201ENST00000219689 NEUROD1Q13562 356 aa15.54■□□□□ 0.08
USP31-201ENST00000219689 ANP32EQ9BTT0 268 aa15.51■□□□□ 0.07
USP31-201ENST00000219689 FKBP8Q14318 412 aa15.46■□□□□ 0.07
USP31-201ENST00000219689 ARXQ96QS3 562 aa15.43■□□□□ 0.06
USP31-201ENST00000219689 RTN4Q9NQC3 1192 aaKnown RBP15.43■□□□□ 0.06
USP31-201ENST00000219689 ANP32CO43423 234 aa15.39■□□□□ 0.05
USP31-201ENST00000219689 ANP32BQ92688 251 aaKnown RBP15.38■□□□□ 0.05
USP31-201ENST00000219689 CHIC1Q5VXU3 224 aa15.33■□□□□ 0.04
USP31-201ENST00000219689 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
USP31-201ENST00000219689 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.24■□□□□ 0.03
USP31-201ENST00000219689 TNNT2P45379 298 aaPredicted RBP15.23■□□□□ 0.03
USP31-201ENST00000219689 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
USP31-201ENST00000219689 NAP1L5Q96NT1 182 aaPredicted RBP15.19■□□□□ 0.02
USP31-201ENST00000219689 AMER1Q5JTC6 1135 aaPredicted RBP15.16■□□□□ 0.02
USP31-201ENST00000219689 CANXP27824 592 aaKnown RBP15.15■□□□□ 0.02
USP31-201ENST00000219689 HSP90AA1P07900 732 aaKnown RBP15.13■□□□□ 0.01
USP31-201ENST00000219689 DEKP35659 375 aaKnown RBP15.1■□□□□ 0.01
USP31-201ENST00000219689 IRX6P78412 446 aaPredicted RBP15.1■□□□□ 0.01
USP31-201ENST00000219689 CDK11BP21127 795 aaKnown RBP15.07■□□□□ 0
USP31-201ENST00000219689 NEFMP07197 916 aa15.05■□□□□ -0
USP31-201ENST00000219689 TRIM44Q96DX7 344 aaPredicted RBP15.03■□□□□ -0
USP31-201ENST00000219689 CSRNP3Q8WYN3 585 aa15.02□□□□□ -0.01
USP31-201ENST00000219689 CCDC136Q96JN2 1154 aa15.02□□□□□ -0.01
USP31-201ENST00000219689 FAM50AQ14320 339 aaKnown RBP15.01□□□□□ -0.01
USP31-201ENST00000219689 MIER1Q8N108 512 aa15.01□□□□□ -0.01
USP31-201ENST00000219689 ERICH6BQ5W0A0 696 aa15□□□□□ -0.01
USP31-201ENST00000219689 HNRNPUQ00839 825 aaKnown RBP eCLIP15□□□□□ -0.01
USP31-201ENST00000219689 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
USP31-201ENST00000219689 UPF2Q9HAU5 1272 aaKnown RBP14.99□□□□□ -0.01
USP31-201ENST00000219689 TRIM52Q96A61 297 aa14.98□□□□□ -0.01
USP31-201ENST00000219689 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.01
USP31-201ENST00000219689 ARID4BQ4LE39 1312 aaPredicted RBP14.94□□□□□ -0.02
USP31-201ENST00000219689 NOP58Q9Y2X3 529 aaKnown RBP14.93□□□□□ -0.02
USP31-201ENST00000219689 DCAF1Q9Y4B6 1507 aa14.93□□□□□ -0.02
USP31-201ENST00000219689 DDRGK1Q96HY6 314 aa14.91□□□□□ -0.02
USP31-201ENST00000219689 ZNF326Q5BKZ1 582 aaKnown RBP14.9□□□□□ -0.02
USP31-201ENST00000219689 FAM9BQ8IZU0 186 aa14.87□□□□□ -0.03
USP31-201ENST00000219689 DDX10Q13206 875 aaKnown RBP14.86□□□□□ -0.03
USP31-201ENST00000219689 DNTTIP2Q5QJE6 756 aaKnown RBP14.85□□□□□ -0.03
USP31-201ENST00000219689 SUPT16HQ9Y5B9 1047 aaKnown RBP14.84□□□□□ -0.03
USP31-201ENST00000219689 ARID3AQ99856 593 aa14.81□□□□□ -0.04
USP31-201ENST00000219689 NCLP19338 710 aaKnown RBP14.79□□□□□ -0.04
USP31-201ENST00000219689 PTMAP06454 111 aaKnown RBP14.79□□□□□ -0.04
USP31-201ENST00000219689 BECN1Q14457 450 aa14.79□□□□□ -0.04
USP31-201ENST00000219689 PRKCSHP14314 528 aaPredicted RBP14.78□□□□□ -0.04
USP31-201ENST00000219689 SALL2Q9Y467 1007 aaPredicted RBP14.78□□□□□ -0.04
USP31-201ENST00000219689 PPM1GO15355 546 aaPredicted RBP14.76□□□□□ -0.05
USP31-201ENST00000219689 RBM19Q9Y4C8 960 aaKnown RBP14.73□□□□□ -0.05
USP31-201ENST00000219689 SLC24A1O60721 1099 aa14.71□□□□□ -0.05
USP31-201ENST00000219689 VSIG10Q8N0Z9 540 aa14.69□□□□□ -0.06
USP31-201ENST00000219689 A0A0U1RQG5 324 aaPredicted RBP14.65□□□□□ -0.06
USP31-201ENST00000219689 TPRNQ4KMQ1 711 aa14.64□□□□□ -0.07
USP31-201ENST00000219689 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms