RNA–Protein interactions for RNA: ENST00000438296.1

IFRD2-205, Transcript of interferon related developmental regulator 2, humanhuman

TSL 5

Gene IFRD2, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD2-205ENST00000438296 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
IFRD2-205ENST00000438296 ABCC9O60706 1549 aa26.55■■□□□ 1.84
IFRD2-205ENST00000438296 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
IFRD2-205ENST00000438296 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.62
IFRD2-205ENST00000438296 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
IFRD2-205ENST00000438296 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
IFRD2-205ENST00000438296 NACADO15069 1562 aa25.02■■□□□ 1.6
IFRD2-205ENST00000438296 PABPN1Q86U42 306 aaKnown RBP eCLIP24.79■■□□□ 1.56
IFRD2-205ENST00000438296 MYO15BQ96JP2 1530 aa24.66■■□□□ 1.54
IFRD2-205ENST00000438296 UNC13AQ9UPW8 1703 aa24.52■■□□□ 1.52
IFRD2-205ENST00000438296 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
IFRD2-205ENST00000438296 ZCCHC6Q5VYS8 1495 aaKnown RBP24.32■■□□□ 1.48
IFRD2-205ENST00000438296 DCAF1Q9Y4B6 1507 aa24.3■■□□□ 1.48
IFRD2-205ENST00000438296 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
IFRD2-205ENST00000438296 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
IFRD2-205ENST00000438296 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.42
IFRD2-205ENST00000438296 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
IFRD2-205ENST00000438296 EIF4G1Q04637 1599 aaKnown RBP23.87■■□□□ 1.41
IFRD2-205ENST00000438296 DNAJC5Q9H3Z4 198 aa23.15■■□□□ 1.3
IFRD2-205ENST00000438296 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
IFRD2-205ENST00000438296 ATAD2BQ9ULI0 1458 aa23.04■■□□□ 1.28
IFRD2-205ENST00000438296 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
IFRD2-205ENST00000438296 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
IFRD2-205ENST00000438296 SMARCA4P51532 1647 aa22.92■■□□□ 1.26
IFRD2-205ENST00000438296 CUX2O14529 1486 aa22.92■■□□□ 1.26
IFRD2-205ENST00000438296 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
IFRD2-205ENST00000438296 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
IFRD2-205ENST00000438296 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
IFRD2-205ENST00000438296 NESP48681 1621 aa22.77■■□□□ 1.24
IFRD2-205ENST00000438296 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
IFRD2-205ENST00000438296 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
IFRD2-205ENST00000438296 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
IFRD2-205ENST00000438296 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
IFRD2-205ENST00000438296 THOC2Q8NI27 1593 aaKnown RBP22.48■■□□□ 1.19
IFRD2-205ENST00000438296 CADPSQ9ULU8 1353 aa22.46■■□□□ 1.19
IFRD2-205ENST00000438296 KIF21AQ7Z4S6 1674 aa22.39■■□□□ 1.17
IFRD2-205ENST00000438296 WIZO95785 1651 aa22.34■■□□□ 1.17
IFRD2-205ENST00000438296 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
IFRD2-205ENST00000438296 WDR62O43379 1518 aa22.21■■□□□ 1.15
IFRD2-205ENST00000438296 RSF1Q96T23 1441 aaPredicted RBP22.2■■□□□ 1.14
IFRD2-205ENST00000438296 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
IFRD2-205ENST00000438296 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
IFRD2-205ENST00000438296 CFTRP13569 1480 aa22.15■■□□□ 1.14
IFRD2-205ENST00000438296 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
IFRD2-205ENST00000438296 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
IFRD2-205ENST00000438296 OSCARQ8IYS5 282 aa21.99■■□□□ 1.11
IFRD2-205ENST00000438296 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
IFRD2-205ENST00000438296 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
IFRD2-205ENST00000438296 IFT140Q96RY7 1462 aa21.76■■□□□ 1.07
IFRD2-205ENST00000438296 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
IFRD2-205ENST00000438296 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
IFRD2-205ENST00000438296 ABCC8Q09428 1581 aa21.71■■□□□ 1.07
IFRD2-205ENST00000438296 TOPBP1Q92547 1522 aa21.7■■□□□ 1.07
IFRD2-205ENST00000438296 DNMBPQ6XZF7 1577 aa21.59■■□□□ 1.05
IFRD2-205ENST00000438296 AQRO60306 1485 aaKnown RBP eCLIP21.55■■□□□ 1.048e-7■■■■■ 30.5
IFRD2-205ENST00000438296 RIMBP3CA6NJZ7 1639 aa21.54■■□□□ 1.04
IFRD2-205ENST00000438296 RIMBP3BA6NNM3 1639 aa21.54■■□□□ 1.04
IFRD2-205ENST00000438296 RIMBP3Q9UFD9 1639 aa21.54■■□□□ 1.04
IFRD2-205ENST00000438296 EIF4G3O43432 1585 aaKnown RBP21.52■■□□□ 1.04
IFRD2-205ENST00000438296 TARBP1Q13395 1621 aaKnown RBP21.49■■□□□ 1.03
IFRD2-205ENST00000438296 FBLN2P98095 1184 aa21.49■■□□□ 1.03
IFRD2-205ENST00000438296 ARHGEF11O15085 1522 aa21.49■■□□□ 1.03
IFRD2-205ENST00000438296 POLA1P09884 1462 aaPredicted RBP21.48■■□□□ 1.03
IFRD2-205ENST00000438296 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
IFRD2-205ENST00000438296 SOGA1O94964 1423 aa21.46■■□□□ 1.03
IFRD2-205ENST00000438296 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
IFRD2-205ENST00000438296 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
IFRD2-205ENST00000438296 CHD1O14646 1710 aa21.35■■□□□ 1.01
IFRD2-205ENST00000438296 FGD5Q6ZNL6 1462 aa21.33■■□□□ 1.01
IFRD2-205ENST00000438296 CHMP7Q8WUX9 453 aaPredicted RBP21.33■■□□□ 1.01
IFRD2-205ENST00000438296 CUX1P39880 1505 aa21.28■■□□□ 1
IFRD2-205ENST00000438296 SNAPC4Q5SXM2 1469 aa21.27■■□□□ 1
IFRD2-205ENST00000438296 ARAP1Q96P48 1450 aa21.27■■□□□ 1
IFRD2-205ENST00000438296 TRHP20396 242 aaPredicted RBP21.27■■□□□ 1
IFRD2-205ENST00000438296 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
IFRD2-205ENST00000438296 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
IFRD2-205ENST00000438296 MAGI1Q96QZ7 1491 aaPredicted RBP21.23■□□□□ 0.99
IFRD2-205ENST00000438296 SUPT5HO00267 1087 aaKnown RBP21.21■□□□□ 0.99
IFRD2-205ENST00000438296 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
IFRD2-205ENST00000438296 CLASP1Q7Z460 1538 aa21.16■□□□□ 0.98
IFRD2-205ENST00000438296 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
IFRD2-205ENST00000438296 GAPVD1Q14C86 1478 aa21.15■□□□□ 0.98
IFRD2-205ENST00000438296 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
IFRD2-205ENST00000438296 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
IFRD2-205ENST00000438296 PBRM1Q86U86 1689 aa21.02■□□□□ 0.95
IFRD2-205ENST00000438296 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
IFRD2-205ENST00000438296 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
IFRD2-205ENST00000438296 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
IFRD2-205ENST00000438296 FHAD1B1AJZ9 1412 aa20.89■□□□□ 0.94
IFRD2-205ENST00000438296 NUP160Q12769 1436 aa20.88■□□□□ 0.93
IFRD2-205ENST00000438296 BIVM-ERCC5R4GMW8 1640 aa20.87■□□□□ 0.93
IFRD2-205ENST00000438296 ADAMTS12P58397 1594 aa20.85■□□□□ 0.93
IFRD2-205ENST00000438296 CEP170Q5SW79 1584 aa20.83■□□□□ 0.92
IFRD2-205ENST00000438296 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.92
IFRD2-205ENST00000438296 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
IFRD2-205ENST00000438296 JPH4Q96JJ6 628 aa20.78■□□□□ 0.92
IFRD2-205ENST00000438296 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
IFRD2-205ENST00000438296 PRG4Q92954 1404 aaPredicted RBP20.72■□□□□ 0.91
IFRD2-205ENST00000438296 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
IFRD2-205ENST00000438296 NPM1P06748 294 aaKnown RBP eCLIP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms