RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 AEBP2Q6ZN18 517 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC11-208ENST00000511955 CHIC1Q5VXU3 224 aa11.42□□□□□ -0.58
TRAPPC11-208ENST00000511955 SLC24A1O60721 1099 aa10.39□□□□□ -0.75
TRAPPC11-208ENST00000511955 NISCHQ9Y2I1 1504 aa10.38□□□□□ -0.75
TRAPPC11-208ENST00000511955 POTEDQ86YR6 584 aa10.07□□□□□ -0.8
TRAPPC11-208ENST00000511955 PHF23Q9BUL5 403 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC11-208ENST00000511955 EHMT2Q96KQ7 1210 aa9.71□□□□□ -0.86
TRAPPC11-208ENST00000511955 SENP3Q9H4L4 574 aaPredicted RBP9.7□□□□□ -0.86
TRAPPC11-208ENST00000511955 DAXXQ9UER7 740 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC11-208ENST00000511955 PLPPR3Q6T4P5 718 aa9.4□□□□□ -0.9
TRAPPC11-208ENST00000511955 RTN4Q9NQC3 1192 aaKnown RBP9.34□□□□□ -0.91
TRAPPC11-208ENST00000511955 NCBP3Q53F19 620 aaKnown RBP9.22□□□□□ -0.93
TRAPPC11-208ENST00000511955 CCDC180Q9P1Z9 1646 aa9.12□□□□□ -0.95
TRAPPC11-208ENST00000511955 AMER1Q5JTC6 1135 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC11-208ENST00000511955 ABCC9O60706 1549 aa9.04□□□□□ -0.96
TRAPPC11-208ENST00000511955 TTBK1Q5TCY1 1321 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC11-208ENST00000511955 MYT1Q01538 1121 aa9□□□□□ -0.97
TRAPPC11-208ENST00000511955 KCNA4P22459 653 aa9□□□□□ -0.97
TRAPPC11-208ENST00000511955 PRKCSHP14314 528 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC11-208ENST00000511955 FOXD1Q16676 465 aa8.95□□□□□ -0.98
TRAPPC11-208ENST00000511955 PELP1Q8IZL8 1130 aaKnown RBP8.95□□□□□ -0.98
TRAPPC11-208ENST00000511955 CSRNP3Q8WYN3 585 aa8.94□□□□□ -0.98
TRAPPC11-208ENST00000511955 APLP2Q06481 763 aa8.92□□□□□ -0.98
TRAPPC11-208ENST00000511955 ERICH6Q7L0X2 663 aa8.89□□□□□ -0.99
TRAPPC11-208ENST00000511955 DCAF8L2P0C7V8 631 aa8.87□□□□□ -0.99
TRAPPC11-208ENST00000511955 ARXQ96QS3 562 aa8.87□□□□□ -0.99
TRAPPC11-208ENST00000511955 TIMELESSQ9UNS1 1208 aa8.81□□□□□ -1
TRAPPC11-208ENST00000511955 ADRA2BP18089 450 aa8.79□□□□□ -1
TRAPPC11-208ENST00000511955 PPP6R1Q9UPN7 881 aa8.78□□□□□ -1
TRAPPC11-208ENST00000511955 RANGAP1P46060 587 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC11-208ENST00000511955 TULP1O00294 542 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC11-208ENST00000511955 TAOK2Q9UL54 1235 aa8.68□□□□□ -1.02
TRAPPC11-208ENST00000511955 ZCCHC6Q5VYS8 1495 aaKnown RBP8.65□□□□□ -1.02
TRAPPC11-208ENST00000511955 HOMEZQ8IX15 550 aa8.62□□□□□ -1.03
TRAPPC11-208ENST00000511955 RB1CC1Q8TDY2 1594 aa8.61□□□□□ -1.03
TRAPPC11-208ENST00000511955 NACADO15069 1562 aa8.59□□□□□ -1.04
TRAPPC11-208ENST00000511955 BCANQ96GW7 911 aa8.57□□□□□ -1.04
TRAPPC11-208ENST00000511955 TPRNQ4KMQ1 711 aa8.56□□□□□ -1.04
TRAPPC11-208ENST00000511955 PABPN1Q86U42 306 aaKnown RBP eCLIP8.51□□□□□ -1.05
TRAPPC11-208ENST00000511955 DCAF1Q9Y4B6 1507 aa8.5□□□□□ -1.05
TRAPPC11-208ENST00000511955 PIAS4Q8N2W9 510 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC11-208ENST00000511955 KLHL34Q8N239 644 aa8.49□□□□□ -1.05
TRAPPC11-208ENST00000511955 SLC4A1APQ9BWU0 796 aaKnown RBP8.49□□□□□ -1.05
TRAPPC11-208ENST00000511955 MYO15BQ96JP2 1530 aa8.49□□□□□ -1.05
TRAPPC11-208ENST00000511955 SCRIBQ14160 1630 aa8.48□□□□□ -1.05
TRAPPC11-208ENST00000511955 PODXL2Q9NZ53 605 aa8.47□□□□□ -1.05
TRAPPC11-208ENST00000511955 EIF5BO60841 1220 aaKnown RBP8.46□□□□□ -1.06
TRAPPC11-208ENST00000511955 SHROOM4Q9ULL8 1493 aa8.45□□□□□ -1.06
TRAPPC11-208ENST00000511955 UNC13AQ9UPW8 1703 aa8.41□□□□□ -1.06
TRAPPC11-208ENST00000511955 GTF3C3Q9Y5Q9 886 aa8.4□□□□□ -1.06
TRAPPC11-208ENST00000511955 PLCB2Q00722 1185 aa8.4□□□□□ -1.07
TRAPPC11-208ENST00000511955 HAP1P54257 671 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC11-208ENST00000511955 BICRAQ9NZM4 1560 aa8.35□□□□□ -1.07
TRAPPC11-208ENST00000511955 PPP4R3CPQ6ZMV5 832 aa8.29□□□□□ -1.08
TRAPPC11-208ENST00000511955 NPM2Q86SE8 214 aaKnown RBP8.28□□□□□ -1.08
TRAPPC11-208ENST00000511955 DNAJC5BQ9UF47 199 aa8.24□□□□□ -1.09
TRAPPC11-208ENST00000511955 C14orf37Q86TY3 774 aa8.2□□□□□ -1.1
TRAPPC11-208ENST00000511955 TMEM132AQ24JP5 1023 aa8.2□□□□□ -1.1
TRAPPC11-208ENST00000511955 MSH5O43196 834 aa8.19□□□□□ -1.1
TRAPPC11-208ENST00000511955 CECR2Q9BXF3 1484 aa8.15□□□□□ -1.1
TRAPPC11-208ENST00000511955 EIF4G1Q04637 1599 aaKnown RBP8.15□□□□□ -1.11
TRAPPC11-208ENST00000511955 ZBTB22O15209 634 aa8.14□□□□□ -1.11
TRAPPC11-208ENST00000511955 PLEKHG5O94827 1062 aa8.14□□□□□ -1.11
TRAPPC11-208ENST00000511955 CC2D2AQ9P2K1 1620 aa8.11□□□□□ -1.11
TRAPPC11-208ENST00000511955 FBXO3Q9UK99 471 aa8.09□□□□□ -1.11
TRAPPC11-208ENST00000511955 VSIG10Q8N0Z9 540 aa8.09□□□□□ -1.11
TRAPPC11-208ENST00000511955 SCAF1Q9H7N4 1312 aaKnown RBP8.08□□□□□ -1.12
TRAPPC11-208ENST00000511955 TRIM26Q12899 539 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC11-208ENST00000511955 SUPT5HO00267 1087 aaKnown RBP8.06□□□□□ -1.12
TRAPPC11-208ENST00000511955 MROH2BQ7Z745 1585 aa8.05□□□□□ -1.12
TRAPPC11-208ENST00000511955 FKBP8Q14318 412 aa8.04□□□□□ -1.12
TRAPPC11-208ENST00000511955 SMARCA4P51532 1647 aa8.04□□□□□ -1.12
TRAPPC11-208ENST00000511955 BAZ1AQ9NRL2 1556 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC11-208ENST00000511955 NPM3O75607 178 aaKnown RBP8.01□□□□□ -1.13
TRAPPC11-208ENST00000511955 CNKSR2Q8WXI2 1034 aa8.01□□□□□ -1.13
TRAPPC11-208ENST00000511955 KDM2AQ9Y2K7 1162 aa8.01□□□□□ -1.13
TRAPPC11-208ENST00000511955 ATAD2BQ9ULI0 1458 aa7.99□□□□□ -1.13
TRAPPC11-208ENST00000511955 UBTFP17480 764 aaKnown RBP7.97□□□□□ -1.13
TRAPPC11-208ENST00000511955 RSF1Q96T23 1441 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC11-208ENST00000511955 WIZO95785 1651 aa7.97□□□□□ -1.13
TRAPPC11-208ENST00000511955 FBLN2P98095 1184 aa7.97□□□□□ -1.13
TRAPPC11-208ENST00000511955 LOC105371045A0A1W2PR82 267 aa7.96□□□□□ -1.14
TRAPPC11-208ENST00000511955 SMARCA2P51531 1590 aa7.96□□□□□ -1.14
TRAPPC11-208ENST00000511955 BAZ1BQ9UIG0 1483 aaKnown RBP7.95□□□□□ -1.14
TRAPPC11-208ENST00000511955 NCAPD3P42695 1498 aa7.94□□□□□ -1.14
TRAPPC11-208ENST00000511955 HRCP23327 699 aa7.94□□□□□ -1.14
TRAPPC11-208ENST00000511955 PEG3Q9GZU2 1588 aa7.9□□□□□ -1.15
TRAPPC11-208ENST00000511955 MAPK8IP2Q13387 824 aaPredicted RBP7.9□□□□□ -1.15
TRAPPC11-208ENST00000511955 HMGXB3Q12766 1538 aa7.89□□□□□ -1.15
TRAPPC11-208ENST00000511955 TOP2AP11388 1531 aaKnown RBP7.84□□□□□ -1.16
TRAPPC11-208ENST00000511955 NESP48681 1621 aa7.84□□□□□ -1.16
TRAPPC11-208ENST00000511955 PDIA4P13667 645 aaKnown RBP7.83□□□□□ -1.16
TRAPPC11-208ENST00000511955 BCL11AQ9H165 835 aa7.83□□□□□ -1.16
TRAPPC11-208ENST00000511955 CHMP4AQ9BY43 222 aa7.8□□□□□ -1.16
TRAPPC11-208ENST00000511955 RNF216Q9NWF9 866 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC11-208ENST00000511955 CCDC88BA6NC98 1476 aa7.79□□□□□ -1.16
TRAPPC11-208ENST00000511955 CDK11BP21127 795 aaKnown RBP7.79□□□□□ -1.16
TRAPPC11-208ENST00000511955 CDK11AQ9UQ88 783 aaPredicted RBP7.79□□□□□ -1.16
TRAPPC11-208ENST00000511955 ERCC6Q03468 1493 aa7.77□□□□□ -1.16
TRAPPC11-208ENST00000511955 DMRT2Q9Y5R5 561 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms