RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 NISCHQ9Y2I1 1504 aa37.95■■■■□ 3.67
TRAPPC11-204ENST00000505676 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
TRAPPC11-204ENST00000505676 ZCCHC6Q5VYS8 1495 aaKnown RBP32.01■■■□□ 2.71
TRAPPC11-204ENST00000505676 DCAF1Q9Y4B6 1507 aa31.53■■■□□ 2.64
TRAPPC11-204ENST00000505676 SHROOM4Q9ULL8 1493 aa31.06■■■□□ 2.56
TRAPPC11-204ENST00000505676 MYO15BQ96JP2 1530 aa31.01■■■□□ 2.55
TRAPPC11-204ENST00000505676 DCAF8L2P0C7V8 631 aa30.95■■■□□ 2.55
TRAPPC11-204ENST00000505676 NACADO15069 1562 aa30.57■■■□□ 2.48
TRAPPC11-204ENST00000505676 ABCC9O60706 1549 aa30.47■■■□□ 2.47
TRAPPC11-204ENST00000505676 SUPT5HO00267 1087 aaKnown RBP30.18■■■□□ 2.42
TRAPPC11-204ENST00000505676 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
TRAPPC11-204ENST00000505676 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
TRAPPC11-204ENST00000505676 RSF1Q96T23 1441 aaPredicted RBP29.59■■■□□ 2.33
TRAPPC11-204ENST00000505676 UNC13AQ9UPW8 1703 aa29.41■■■□□ 2.3
TRAPPC11-204ENST00000505676 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
TRAPPC11-204ENST00000505676 BAZ1AQ9NRL2 1556 aaPredicted RBP29.31■■■□□ 2.28
TRAPPC11-204ENST00000505676 MROH2BQ7Z745 1585 aa29.25■■■□□ 2.27
TRAPPC11-204ENST00000505676 CHIC1Q5VXU3 224 aa29.25■■■□□ 2.27
TRAPPC11-204ENST00000505676 BICRAQ9NZM4 1560 aa29.12■■■□□ 2.25
TRAPPC11-204ENST00000505676 SMARCA4P51532 1647 aa29.05■■■□□ 2.24
TRAPPC11-204ENST00000505676 WIZO95785 1651 aa29.02■■■□□ 2.24
TRAPPC11-204ENST00000505676 TOP2AP11388 1531 aaKnown RBP28.87■■■□□ 2.21
TRAPPC11-204ENST00000505676 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
TRAPPC11-204ENST00000505676 PEG3Q9GZU2 1588 aa28.77■■■□□ 2.2
TRAPPC11-204ENST00000505676 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
TRAPPC11-204ENST00000505676 EIF4G1Q04637 1599 aaKnown RBP28.53■■■□□ 2.16
TRAPPC11-204ENST00000505676 CCDC88BA6NC98 1476 aa28.49■■■□□ 2.15
TRAPPC11-204ENST00000505676 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
TRAPPC11-204ENST00000505676 ATAD2BQ9ULI0 1458 aa28.45■■■□□ 2.14
TRAPPC11-204ENST00000505676 BAZ1BQ9UIG0 1483 aaKnown RBP28.33■■■□□ 2.13
TRAPPC11-204ENST00000505676 HMGXB3Q12766 1538 aa28.21■■■□□ 2.11
TRAPPC11-204ENST00000505676 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
TRAPPC11-204ENST00000505676 LOC105371045A0A1W2PR82 267 aa28.01■■■□□ 2.07
TRAPPC11-204ENST00000505676 ABCC8Q09428 1581 aa27.97■■■□□ 2.07
TRAPPC11-204ENST00000505676 EEA1Q15075 1411 aa27.9■■■□□ 2.06
TRAPPC11-204ENST00000505676 WRNQ14191 1432 aaPredicted RBP eCLIP27.88■■■□□ 2.05
TRAPPC11-204ENST00000505676 FAM9AQ8IZU1 332 aaPredicted RBP27.78■■■□□ 2.04
TRAPPC11-204ENST00000505676 CFTRP13569 1480 aa27.67■■■□□ 2.02
TRAPPC11-204ENST00000505676 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
TRAPPC11-204ENST00000505676 CC2D2AQ9P2K1 1620 aa27.66■■■□□ 2.02
TRAPPC11-204ENST00000505676 TOP2BQ02880 1626 aa27.61■■■□□ 2.01
TRAPPC11-204ENST00000505676 BIVM-ERCC5R4GMW8 1640 aa27.58■■■□□ 2.01
TRAPPC11-204ENST00000505676 PRDM2Q13029 1718 aa27.58■■■□□ 2.01
TRAPPC11-204ENST00000505676 SOGA1O94964 1423 aa27.57■■■□□ 2
TRAPPC11-204ENST00000505676 CSRNP3Q8WYN3 585 aa27.52■■■□□ 2
TRAPPC11-204ENST00000505676 CADPSQ9ULU8 1353 aa27.46■■□□□ 1.99
TRAPPC11-204ENST00000505676 TNIKQ9UKE5 1360 aa27.44■■□□□ 1.98
TRAPPC11-204ENST00000505676 GOLGA3Q08378 1498 aa27.43■■□□□ 1.98
TRAPPC11-204ENST00000505676 KIF21BO75037 1637 aa27.41■■□□□ 1.98
TRAPPC11-204ENST00000505676 CEP164Q9UPV0 1460 aa27.4■■□□□ 1.98
TRAPPC11-204ENST00000505676 RUSC2Q8N2Y8 1516 aa27.38■■□□□ 1.97
TRAPPC11-204ENST00000505676 TRIM26Q12899 539 aaPredicted RBP27.37■■□□□ 1.97
TRAPPC11-204ENST00000505676 CUX1P39880 1505 aa27.34■■□□□ 1.97
TRAPPC11-204ENST00000505676 PCGF6Q9BYE7 350 aa27.33■■□□□ 1.97
TRAPPC11-204ENST00000505676 CEP162Q5TB80 1403 aa27.26■■□□□ 1.95
TRAPPC11-204ENST00000505676 EHMT2Q96KQ7 1210 aa27.24■■□□□ 1.95
TRAPPC11-204ENST00000505676 ERICH3Q5RHP9 1530 aa27.17■■□□□ 1.94
TRAPPC11-204ENST00000505676 KIF27Q86VH2 1401 aa27.17■■□□□ 1.94
TRAPPC11-204ENST00000505676 UBTFP17480 764 aaKnown RBP27.16■■□□□ 1.94
TRAPPC11-204ENST00000505676 LAMC3Q9Y6N6 1575 aa27.15■■□□□ 1.94
TRAPPC11-204ENST00000505676 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
TRAPPC11-204ENST00000505676 PRXQ9BXM0 1461 aa27.09■■□□□ 1.93
TRAPPC11-204ENST00000505676 HRCP23327 699 aa27.07■■□□□ 1.92
TRAPPC11-204ENST00000505676 RAPGEF2Q9Y4G8 1499 aa27.03■■□□□ 1.92
TRAPPC11-204ENST00000505676 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
TRAPPC11-204ENST00000505676 FGD5Q6ZNL6 1462 aa26.98■■□□□ 1.91
TRAPPC11-204ENST00000505676 CLIP1P30622 1438 aa26.95■■□□□ 1.91
TRAPPC11-204ENST00000505676 PDS5BQ9NTI5 1447 aa26.92■■□□□ 1.9
TRAPPC11-204ENST00000505676 CUX2O14529 1486 aa26.9■■□□□ 1.9
TRAPPC11-204ENST00000505676 TOPBP1Q92547 1522 aa26.89■■□□□ 1.9
TRAPPC11-204ENST00000505676 NESP48681 1621 aa26.88■■□□□ 1.89
TRAPPC11-204ENST00000505676 VPS8Q8N3P4 1428 aa26.83■■□□□ 1.89
TRAPPC11-204ENST00000505676 ABCA10Q8WWZ4 1543 aa26.83■■□□□ 1.89
TRAPPC11-204ENST00000505676 IGF1RP08069 1367 aa26.8■■□□□ 1.88
TRAPPC11-204ENST00000505676 POLA1P09884 1462 aaPredicted RBP26.78■■□□□ 1.88
TRAPPC11-204ENST00000505676 URB2Q14146 1524 aaKnown RBP26.72■■□□□ 1.87
TRAPPC11-204ENST00000505676 CARMIL1Q5VZK9 1371 aa26.7■■□□□ 1.86
TRAPPC11-204ENST00000505676 ZEB1P37275 1124 aaPredicted RBP26.69■■□□□ 1.86
TRAPPC11-204ENST00000505676 CUL7Q14999 1698 aa26.66■■□□□ 1.86
TRAPPC11-204ENST00000505676 WDR97A6NE52 1622 aa26.66■■□□□ 1.86
TRAPPC11-204ENST00000505676 KIF21AQ7Z4S6 1674 aa26.62■■□□□ 1.85
TRAPPC11-204ENST00000505676 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
TRAPPC11-204ENST00000505676 ARAP1Q96P48 1450 aa26.59■■□□□ 1.85
TRAPPC11-204ENST00000505676 APLP2Q06481 763 aa26.58■■□□□ 1.85
TRAPPC11-204ENST00000505676 PPARGC1BQ86YN6 1023 aaKnown RBP26.55■■□□□ 1.84
TRAPPC11-204ENST00000505676 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
TRAPPC11-204ENST00000505676 DNAJC5BQ9UF47 199 aa26.54■■□□□ 1.84
TRAPPC11-204ENST00000505676 MRC2Q9UBG0 1479 aa26.52■■□□□ 1.84
TRAPPC11-204ENST00000505676 ARHGAP35Q9NRY4 1499 aa26.5■■□□□ 1.83
TRAPPC11-204ENST00000505676 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
TRAPPC11-204ENST00000505676 TARBP1Q13395 1621 aaKnown RBP26.44■■□□□ 1.82
TRAPPC11-204ENST00000505676 EFCAB5A4FU69 1503 aa26.4■■□□□ 1.82
TRAPPC11-204ENST00000505676 MAP3K1Q13233 1512 aa26.38■■□□□ 1.81
TRAPPC11-204ENST00000505676 RANGAP1P46060 587 aaPredicted RBP26.37■■□□□ 1.81
TRAPPC11-204ENST00000505676 WDR62O43379 1518 aa26.36■■□□□ 1.81
TRAPPC11-204ENST00000505676 CTTNBP2Q8WZ74 1663 aa26.36■■□□□ 1.81
TRAPPC11-204ENST00000505676 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
TRAPPC11-204ENST00000505676 TDRD9Q8NDG6 1382 aaKnown RBP26.31■■□□□ 1.8
TRAPPC11-204ENST00000505676 IFT140Q96RY7 1462 aa26.31■■□□□ 1.8
TRAPPC11-204ENST00000505676 TTBK1Q5TCY1 1321 aaPredicted RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms