RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
VAC14-203ENST00000561879 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
VAC14-203ENST00000561879 NISCHQ9Y2I1 1504 aa24.19■■□□□ 1.46
VAC14-203ENST00000561879 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
VAC14-203ENST00000561879 SENP3Q9H4L4 574 aaPredicted RBP22.58■■□□□ 1.21
VAC14-203ENST00000561879 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
VAC14-203ENST00000561879 CCDC180Q9P1Z9 1646 aa21.17■□□□□ 0.98
VAC14-203ENST00000561879 FOXD1Q16676 465 aa20.91■□□□□ 0.94
VAC14-203ENST00000561879 ADRA2BP18089 450 aa20.65■□□□□ 0.9
VAC14-203ENST00000561879 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
VAC14-203ENST00000561879 ZCCHC6Q5VYS8 1495 aaKnown RBP20.26■□□□□ 0.83
VAC14-203ENST00000561879 ABCC9O60706 1549 aa20.13■□□□□ 0.81
VAC14-203ENST00000561879 DCAF1Q9Y4B6 1507 aa20.09■□□□□ 0.81
VAC14-203ENST00000561879 DCAF8L2P0C7V8 631 aa19.97■□□□□ 0.79
VAC14-203ENST00000561879 MYO15BQ96JP2 1530 aa19.97■□□□□ 0.79
VAC14-203ENST00000561879 PIAS4Q8N2W9 510 aaPredicted RBP19.85■□□□□ 0.77
VAC14-203ENST00000561879 NACADO15069 1562 aa19.83■□□□□ 0.76
VAC14-203ENST00000561879 KCNA4P22459 653 aa19.77■□□□□ 0.76
VAC14-203ENST00000561879 RB1CC1Q8TDY2 1594 aa19.66■□□□□ 0.74
VAC14-203ENST00000561879 PPP4R3CPQ6ZMV5 832 aa19.46■□□□□ 0.71
VAC14-203ENST00000561879 SHROOM4Q9ULL8 1493 aa19.43■□□□□ 0.7
VAC14-203ENST00000561879 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
VAC14-203ENST00000561879 EHMT2Q96KQ7 1210 aa19.11■□□□□ 0.65
VAC14-203ENST00000561879 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
VAC14-203ENST00000561879 UNC13AQ9UPW8 1703 aa19.1■□□□□ 0.65
VAC14-203ENST00000561879 BICRAQ9NZM4 1560 aa19.02■□□□□ 0.64
VAC14-203ENST00000561879 MSH5O43196 834 aa18.99■□□□□ 0.63
VAC14-203ENST00000561879 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
VAC14-203ENST00000561879 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
VAC14-203ENST00000561879 NPM3O75607 178 aaKnown RBP18.88■□□□□ 0.61
VAC14-203ENST00000561879 SCAF1Q9H7N4 1312 aaKnown RBP18.81■□□□□ 0.6
VAC14-203ENST00000561879 CNKSR2Q8WXI2 1034 aa18.77■□□□□ 0.6
VAC14-203ENST00000561879 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
VAC14-203ENST00000561879 BAZ1AQ9NRL2 1556 aaPredicted RBP18.7■□□□□ 0.58
VAC14-203ENST00000561879 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
VAC14-203ENST00000561879 SUPT5HO00267 1087 aaKnown RBP18.66■□□□□ 0.58
VAC14-203ENST00000561879 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
VAC14-203ENST00000561879 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
VAC14-203ENST00000561879 SMARCA4P51532 1647 aa18.59■□□□□ 0.57
VAC14-203ENST00000561879 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
VAC14-203ENST00000561879 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
VAC14-203ENST00000561879 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
VAC14-203ENST00000561879 WIZO95785 1651 aa18.41■□□□□ 0.54
VAC14-203ENST00000561879 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.54
VAC14-203ENST00000561879 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
VAC14-203ENST00000561879 NCAPD3P42695 1498 aa18.33■□□□□ 0.52
VAC14-203ENST00000561879 TOP2AP11388 1531 aaKnown RBP18.29■□□□□ 0.52
VAC14-203ENST00000561879 DNAJC5BQ9UF47 199 aa18.26■□□□□ 0.51
VAC14-203ENST00000561879 RNF216Q9NWF9 866 aaPredicted RBP18.25■□□□□ 0.51
VAC14-203ENST00000561879 BAZ1BQ9UIG0 1483 aaKnown RBP18.24■□□□□ 0.51
VAC14-203ENST00000561879 ZBTB22O15209 634 aa18.23■□□□□ 0.51
VAC14-203ENST00000561879 CC2D2AQ9P2K1 1620 aa18.23■□□□□ 0.51
VAC14-203ENST00000561879 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
VAC14-203ENST00000561879 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
VAC14-203ENST00000561879 CCDC88BA6NC98 1476 aa18.11■□□□□ 0.49
VAC14-203ENST00000561879 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
VAC14-203ENST00000561879 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
VAC14-203ENST00000561879 CFTRP13569 1480 aa17.83■□□□□ 0.45
VAC14-203ENST00000561879 CADPSQ9ULU8 1353 aa17.82■□□□□ 0.44
VAC14-203ENST00000561879 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
VAC14-203ENST00000561879 LAMC3Q9Y6N6 1575 aa17.68■□□□□ 0.42
VAC14-203ENST00000561879 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
VAC14-203ENST00000561879 NESP48681 1621 aa17.6■□□□□ 0.41
VAC14-203ENST00000561879 PRDM2Q13029 1718 aa17.59■□□□□ 0.41
VAC14-203ENST00000561879 WRNQ14191 1432 aaPredicted RBP eCLIP17.59■□□□□ 0.41
VAC14-203ENST00000561879 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
VAC14-203ENST00000561879 FANCD2Q9BXW9 1451 aa17.56■□□□□ 0.4
VAC14-203ENST00000561879 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
VAC14-203ENST00000561879 CEP164Q9UPV0 1460 aa17.47■□□□□ 0.39
VAC14-203ENST00000561879 TOP2BQ02880 1626 aa17.45■□□□□ 0.38
VAC14-203ENST00000561879 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
VAC14-203ENST00000561879 CUX1P39880 1505 aa17.43■□□□□ 0.38
VAC14-203ENST00000561879 BIVM-ERCC5R4GMW8 1640 aa17.41■□□□□ 0.38
VAC14-203ENST00000561879 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
VAC14-203ENST00000561879 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
VAC14-203ENST00000561879 TOPBP1Q92547 1522 aa17.35■□□□□ 0.37
VAC14-203ENST00000561879 KIF21AQ7Z4S6 1674 aa17.33■□□□□ 0.37
VAC14-203ENST00000561879 URB2Q14146 1524 aaKnown RBP17.33■□□□□ 0.37
VAC14-203ENST00000561879 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
VAC14-203ENST00000561879 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
VAC14-203ENST00000561879 EEA1Q15075 1411 aa17.31■□□□□ 0.36
VAC14-203ENST00000561879 ATXN8OSP0DMR3 200 aa17.3■□□□□ 0.36
VAC14-203ENST00000561879 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
VAC14-203ENST00000561879 FGD5Q6ZNL6 1462 aa17.28■□□□□ 0.36
VAC14-203ENST00000561879 SOGA1O94964 1423 aa17.26■□□□□ 0.35
VAC14-203ENST00000561879 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
VAC14-203ENST00000561879 WDR62O43379 1518 aa17.23■□□□□ 0.35
VAC14-203ENST00000561879 FAM9AQ8IZU1 332 aaPredicted RBP17.2■□□□□ 0.34
VAC14-203ENST00000561879 KIF27Q86VH2 1401 aa17.2■□□□□ 0.34
VAC14-203ENST00000561879 ABCA10Q8WWZ4 1543 aa17.18■□□□□ 0.34
VAC14-203ENST00000561879 RUSC2Q8N2Y8 1516 aa17.17■□□□□ 0.34
VAC14-203ENST00000561879 THOC2Q8NI27 1593 aaKnown RBP17.16■□□□□ 0.34
VAC14-203ENST00000561879 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
VAC14-203ENST00000561879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.14■□□□□ 0.33
VAC14-203ENST00000561879 CUX2O14529 1486 aa17.13■□□□□ 0.33
VAC14-203ENST00000561879 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
VAC14-203ENST00000561879 TARBP1Q13395 1621 aaKnown RBP17.09■□□□□ 0.33
VAC14-203ENST00000561879 IGF1RP08069 1367 aa17.08■□□□□ 0.32
VAC14-203ENST00000561879 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.32
VAC14-203ENST00000561879 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms