RNA–Protein interactions for RNA: ENST00000572550.1

TRIM25-206, Transcript of tripartite motif containing 25, humanhuman

TSL 5

Gene TRIM25, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-206ENST00000572550 CHIC1Q5VXU3 224 aa13.8□□□□□ -0.2
TRIM25-206ENST00000572550 AEBP2Q6ZN18 517 aaPredicted RBP13.65□□□□□ -0.22
TRIM25-206ENST00000572550 NISCHQ9Y2I1 1504 aa13.54□□□□□ -0.24
TRIM25-206ENST00000572550 PHF23Q9BUL5 403 aaPredicted RBP12.3□□□□□ -0.44
TRIM25-206ENST00000572550 SENP3Q9H4L4 574 aaPredicted RBP11.93□□□□□ -0.5
TRIM25-206ENST00000572550 CCDC180Q9P1Z9 1646 aa11.77□□□□□ -0.53
TRIM25-206ENST00000572550 POTEDQ86YR6 584 aa11.48□□□□□ -0.57
TRIM25-206ENST00000572550 ZCCHC6Q5VYS8 1495 aaKnown RBP11.46□□□□□ -0.57
TRIM25-206ENST00000572550 PLPPR3Q6T4P5 718 aa11.42□□□□□ -0.58
TRIM25-206ENST00000572550 DCAF1Q9Y4B6 1507 aa11.31□□□□□ -0.6
TRIM25-206ENST00000572550 MYO15BQ96JP2 1530 aa11.1□□□□□ -0.63
TRIM25-206ENST00000572550 FOXD1Q16676 465 aa11.08□□□□□ -0.64
TRIM25-206ENST00000572550 SHROOM4Q9ULL8 1493 aa10.98□□□□□ -0.65
TRIM25-206ENST00000572550 ADRA2BP18089 450 aa10.87□□□□□ -0.67
TRIM25-206ENST00000572550 NACADO15069 1562 aa10.86□□□□□ -0.67
TRIM25-206ENST00000572550 ABCC9O60706 1549 aa10.8□□□□□ -0.68
TRIM25-206ENST00000572550 MSH5O43196 834 aa10.76□□□□□ -0.69
TRIM25-206ENST00000572550 DCAF8L2P0C7V8 631 aa10.76□□□□□ -0.69
TRIM25-206ENST00000572550 EHMT2Q96KQ7 1210 aa10.71□□□□□ -0.69
TRIM25-206ENST00000572550 KCNA4P22459 653 aa10.7□□□□□ -0.7
TRIM25-206ENST00000572550 PPP6R1Q9UPN7 881 aa10.7□□□□□ -0.7
TRIM25-206ENST00000572550 SCRIBQ14160 1630 aa10.69□□□□□ -0.7
TRIM25-206ENST00000572550 SUPT5HO00267 1087 aaKnown RBP10.68□□□□□ -0.7
TRIM25-206ENST00000572550 RB1CC1Q8TDY2 1594 aa10.66□□□□□ -0.7
TRIM25-206ENST00000572550 RSF1Q96T23 1441 aaPredicted RBP10.57□□□□□ -0.72
TRIM25-206ENST00000572550 BAZ1AQ9NRL2 1556 aaPredicted RBP10.44□□□□□ -0.74
TRIM25-206ENST00000572550 UNC13AQ9UPW8 1703 aa10.43□□□□□ -0.74
TRIM25-206ENST00000572550 MROH2BQ7Z745 1585 aa10.42□□□□□ -0.74
TRIM25-206ENST00000572550 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
TRIM25-206ENST00000572550 SMARCA4P51532 1647 aa10.36□□□□□ -0.75
TRIM25-206ENST00000572550 BICRAQ9NZM4 1560 aa10.34□□□□□ -0.75
TRIM25-206ENST00000572550 WIZO95785 1651 aa10.32□□□□□ -0.76
TRIM25-206ENST00000572550 TOP2AP11388 1531 aaKnown RBP10.32□□□□□ -0.76
TRIM25-206ENST00000572550 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
TRIM25-206ENST00000572550 PIAS4Q8N2W9 510 aaPredicted RBP10.3□□□□□ -0.76
TRIM25-206ENST00000572550 PEG3Q9GZU2 1588 aa10.3□□□□□ -0.76
TRIM25-206ENST00000572550 CSRNP3Q8WYN3 585 aa10.29□□□□□ -0.76
TRIM25-206ENST00000572550 SLC4A1APQ9BWU0 796 aaKnown RBP10.24□□□□□ -0.77
TRIM25-206ENST00000572550 PPP4R3CPQ6ZMV5 832 aa10.22□□□□□ -0.77
TRIM25-206ENST00000572550 SMARCA2P51531 1590 aa10.2□□□□□ -0.78
TRIM25-206ENST00000572550 CCDC88BA6NC98 1476 aa10.14□□□□□ -0.79
TRIM25-206ENST00000572550 TRIM41Q8WV44 630 aa10.1□□□□□ -0.79
TRIM25-206ENST00000572550 ATAD2BQ9ULI0 1458 aa10.1□□□□□ -0.79
TRIM25-206ENST00000572550 HMGXB3Q12766 1538 aa10.05□□□□□ -0.8
TRIM25-206ENST00000572550 BAZ1BQ9UIG0 1483 aaKnown RBP10.03□□□□□ -0.8
TRIM25-206ENST00000572550 NCBP3Q53F19 620 aaKnown RBP10.02□□□□□ -0.81
TRIM25-206ENST00000572550 PABPN1Q86U42 306 aaKnown RBP eCLIP10.02□□□□□ -0.81
TRIM25-206ENST00000572550 EEA1Q15075 1411 aa10.01□□□□□ -0.81
TRIM25-206ENST00000572550 NCAPD3P42695 1498 aa10□□□□□ -0.81
TRIM25-206ENST00000572550 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
TRIM25-206ENST00000572550 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
TRIM25-206ENST00000572550 NPM3O75607 178 aaKnown RBP9.97□□□□□ -0.81
TRIM25-206ENST00000572550 WRNQ14191 1432 aaPredicted RBP eCLIP9.93□□□□□ -0.82
TRIM25-206ENST00000572550 BIVM-ERCC5R4GMW8 1640 aa9.89□□□□□ -0.83
TRIM25-206ENST00000572550 SYNJ1O43426 1573 aa9.88□□□□□ -0.83
TRIM25-206ENST00000572550 ZBTB22O15209 634 aa9.88□□□□□ -0.83
TRIM25-206ENST00000572550 TOP2BQ02880 1626 aa9.87□□□□□ -0.83
TRIM25-206ENST00000572550 KIF21BO75037 1637 aa9.86□□□□□ -0.83
TRIM25-206ENST00000572550 HRCP23327 699 aa9.86□□□□□ -0.83
TRIM25-206ENST00000572550 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
TRIM25-206ENST00000572550 TRIM26Q12899 539 aaPredicted RBP9.85□□□□□ -0.83
TRIM25-206ENST00000572550 TNIKQ9UKE5 1360 aa9.85□□□□□ -0.83
TRIM25-206ENST00000572550 CFTRP13569 1480 aa9.84□□□□□ -0.83
TRIM25-206ENST00000572550 SOGA1O94964 1423 aa9.83□□□□□ -0.84
TRIM25-206ENST00000572550 GOLGA3Q08378 1498 aa9.83□□□□□ -0.84
TRIM25-206ENST00000572550 CEP164Q9UPV0 1460 aa9.81□□□□□ -0.84
TRIM25-206ENST00000572550 FAM9AQ8IZU1 332 aaPredicted RBP9.81□□□□□ -0.84
TRIM25-206ENST00000572550 PCGF6Q9BYE7 350 aa9.81□□□□□ -0.84
TRIM25-206ENST00000572550 CEP162Q5TB80 1403 aa9.77□□□□□ -0.85
TRIM25-206ENST00000572550 RUSC2Q8N2Y8 1516 aa9.77□□□□□ -0.85
TRIM25-206ENST00000572550 ERICH3Q5RHP9 1530 aa9.76□□□□□ -0.85
TRIM25-206ENST00000572550 CUX1P39880 1505 aa9.74□□□□□ -0.85
TRIM25-206ENST00000572550 CNKSR2Q8WXI2 1034 aa9.73□□□□□ -0.85
TRIM25-206ENST00000572550 CC2D2AQ9P2K1 1620 aa9.73□□□□□ -0.85
TRIM25-206ENST00000572550 CADPSQ9ULU8 1353 aa9.71□□□□□ -0.86
TRIM25-206ENST00000572550 PRXQ9BXM0 1461 aa9.71□□□□□ -0.86
TRIM25-206ENST00000572550 KIF27Q86VH2 1401 aa9.66□□□□□ -0.86
TRIM25-206ENST00000572550 ZEB1P37275 1124 aaPredicted RBP9.66□□□□□ -0.86
TRIM25-206ENST00000572550 RAPGEF2Q9Y4G8 1499 aa9.66□□□□□ -0.86
TRIM25-206ENST00000572550 CLIP1P30622 1438 aa9.64□□□□□ -0.87
TRIM25-206ENST00000572550 VPS8Q8N3P4 1428 aa9.63□□□□□ -0.87
TRIM25-206ENST00000572550 CACNB1Q02641 598 aaPredicted RBP9.62□□□□□ -0.87
TRIM25-206ENST00000572550 DNMBPQ6XZF7 1577 aa9.62□□□□□ -0.87
TRIM25-206ENST00000572550 LAMC3Q9Y6N6 1575 aa9.62□□□□□ -0.87
TRIM25-206ENST00000572550 SCAF1Q9H7N4 1312 aaKnown RBP9.61□□□□□ -0.87
TRIM25-206ENST00000572550 UBTFP17480 764 aaKnown RBP9.59□□□□□ -0.87
TRIM25-206ENST00000572550 MAPK8IP2Q13387 824 aaPredicted RBP9.59□□□□□ -0.87
TRIM25-206ENST00000572550 FANCD2Q9BXW9 1451 aa9.59□□□□□ -0.87
TRIM25-206ENST00000572550 FOXD4L1Q9NU39 408 aa9.58□□□□□ -0.88
TRIM25-206ENST00000572550 FGD5Q6ZNL6 1462 aa9.58□□□□□ -0.88
TRIM25-206ENST00000572550 ABCA10Q8WWZ4 1543 aa9.56□□□□□ -0.88
TRIM25-206ENST00000572550 ARAP1Q96P48 1450 aa9.54□□□□□ -0.88
TRIM25-206ENST00000572550 CUX2O14529 1486 aa9.53□□□□□ -0.88
TRIM25-206ENST00000572550 WDR97A6NE52 1622 aa9.53□□□□□ -0.88
TRIM25-206ENST00000572550 TOPBP1Q92547 1522 aa9.53□□□□□ -0.88
TRIM25-206ENST00000572550 IGF1RP08069 1367 aa9.52□□□□□ -0.88
TRIM25-206ENST00000572550 CUL7Q14999 1698 aa9.51□□□□□ -0.89
TRIM25-206ENST00000572550 POLA1P09884 1462 aaPredicted RBP9.51□□□□□ -0.89
TRIM25-206ENST00000572550 MAP3K1Q13233 1512 aa9.51□□□□□ -0.89
TRIM25-206ENST00000572550 RTN4Q9NQC3 1192 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms