RNA–Protein interactions for RNA: ENST00000521158.5

VDAC3-206, Transcript of voltage dependent anion channel 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene VDAC3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-206ENST00000521158 CHIC1Q5VXU3 224 aa20.62■□□□□ 0.89
VDAC3-206ENST00000521158 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
VDAC3-206ENST00000521158 NISCHQ9Y2I1 1504 aa19.93■□□□□ 0.78
VDAC3-206ENST00000521158 ABCC9O60706 1549 aa18.54■□□□□ 0.56
VDAC3-206ENST00000521158 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
VDAC3-206ENST00000521158 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
VDAC3-206ENST00000521158 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
VDAC3-206ENST00000521158 RB1CC1Q8TDY2 1594 aa17.46■□□□□ 0.39
VDAC3-206ENST00000521158 NACADO15069 1562 aa17.25■□□□□ 0.35
VDAC3-206ENST00000521158 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
VDAC3-206ENST00000521158 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
VDAC3-206ENST00000521158 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
VDAC3-206ENST00000521158 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
VDAC3-206ENST00000521158 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
VDAC3-206ENST00000521158 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
VDAC3-206ENST00000521158 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
VDAC3-206ENST00000521158 DNAJC5Q9H3Z4 198 aa16.83■□□□□ 0.28
VDAC3-206ENST00000521158 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
VDAC3-206ENST00000521158 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
VDAC3-206ENST00000521158 SHROOM4Q9ULL8 1493 aa16.75■□□□□ 0.27
VDAC3-206ENST00000521158 EIF4G1Q04637 1599 aaKnown RBP16.63■□□□□ 0.25
VDAC3-206ENST00000521158 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
VDAC3-206ENST00000521158 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
VDAC3-206ENST00000521158 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
VDAC3-206ENST00000521158 CUX2O14529 1486 aa16.24■□□□□ 0.19
VDAC3-206ENST00000521158 EHMT2Q96KQ7 1210 aa16.2■□□□□ 0.18
VDAC3-206ENST00000521158 ADRA2BP18089 450 aa16.15■□□□□ 0.18
VDAC3-206ENST00000521158 KCNA4P22459 653 aa16.08■□□□□ 0.16
VDAC3-206ENST00000521158 ERCC6Q03468 1493 aa15.99■□□□□ 0.15
VDAC3-206ENST00000521158 NCAPD3P42695 1498 aa15.96■□□□□ 0.14
VDAC3-206ENST00000521158 PPP6R1Q9UPN7 881 aa15.86■□□□□ 0.13
VDAC3-206ENST00000521158 NESP48681 1621 aa15.82■□□□□ 0.12
VDAC3-206ENST00000521158 THOC2Q8NI27 1593 aaKnown RBP15.81■□□□□ 0.12
VDAC3-206ENST00000521158 ATAD2BQ9ULI0 1458 aa15.8■□□□□ 0.12
VDAC3-206ENST00000521158 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
VDAC3-206ENST00000521158 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
VDAC3-206ENST00000521158 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
VDAC3-206ENST00000521158 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
VDAC3-206ENST00000521158 LAMC3Q9Y6N6 1575 aa15.65■□□□□ 0.1
VDAC3-206ENST00000521158 FOXD1Q16676 465 aa15.63■□□□□ 0.09
VDAC3-206ENST00000521158 KIF21AQ7Z4S6 1674 aa15.61■□□□□ 0.09
VDAC3-206ENST00000521158 PEG3Q9GZU2 1588 aa15.57■□□□□ 0.08
VDAC3-206ENST00000521158 BAZ1BQ9UIG0 1483 aaKnown RBP15.56■□□□□ 0.08
VDAC3-206ENST00000521158 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
VDAC3-206ENST00000521158 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.08
VDAC3-206ENST00000521158 BAZ1AQ9NRL2 1556 aaPredicted RBP15.48■□□□□ 0.07
VDAC3-206ENST00000521158 WDR62O43379 1518 aa15.47■□□□□ 0.07
VDAC3-206ENST00000521158 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
VDAC3-206ENST00000521158 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
VDAC3-206ENST00000521158 CADPSQ9ULU8 1353 aa15.39■□□□□ 0.05
VDAC3-206ENST00000521158 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
VDAC3-206ENST00000521158 MROH2BQ7Z745 1585 aa15.34■□□□□ 0.05
VDAC3-206ENST00000521158 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
VDAC3-206ENST00000521158 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
VDAC3-206ENST00000521158 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
VDAC3-206ENST00000521158 RIMBP3Q9UFD9 1639 aa15.27■□□□□ 0.03
VDAC3-206ENST00000521158 CEP164Q9UPV0 1460 aa15.26■□□□□ 0.03
VDAC3-206ENST00000521158 FANCD2Q9BXW9 1451 aa15.2■□□□□ 0.02
VDAC3-206ENST00000521158 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
VDAC3-206ENST00000521158 URB2Q14146 1524 aaKnown RBP15.15■□□□□ 0.02
VDAC3-206ENST00000521158 CFTRP13569 1480 aa15.14■□□□□ 0.01
VDAC3-206ENST00000521158 WIZO95785 1651 aa15.12■□□□□ 0.01
VDAC3-206ENST00000521158 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
VDAC3-206ENST00000521158 ZNF608Q9ULD9 1512 aaPredicted RBP15.02■□□□□ -0
VDAC3-206ENST00000521158 CYB5RLQ6IPT4 315 aa15.01□□□□□ -0.01
VDAC3-206ENST00000521158 ARAP1Q96P48 1450 aa14.99□□□□□ -0.01
VDAC3-206ENST00000521158 IFT140Q96RY7 1462 aa14.98□□□□□ -0.01
VDAC3-206ENST00000521158 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
VDAC3-206ENST00000521158 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
VDAC3-206ENST00000521158 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
VDAC3-206ENST00000521158 PIAS4Q8N2W9 510 aaPredicted RBP14.94□□□□□ -0.02
VDAC3-206ENST00000521158 EIF4G3O43432 1585 aaKnown RBP14.92□□□□□ -0.02
VDAC3-206ENST00000521158 RSF1Q96T23 1441 aaPredicted RBP14.91□□□□□ -0.02
VDAC3-206ENST00000521158 CHD1O14646 1710 aa14.9□□□□□ -0.02
VDAC3-206ENST00000521158 TOP2AP11388 1531 aaKnown RBP14.89□□□□□ -0.03
VDAC3-206ENST00000521158 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
VDAC3-206ENST00000521158 ZBTB22O15209 634 aa14.86□□□□□ -0.03
VDAC3-206ENST00000521158 TARBP1Q13395 1621 aaKnown RBP14.83□□□□□ -0.04
VDAC3-206ENST00000521158 AQRO60306 1485 aaKnown RBP eCLIP14.81□□□□□ -0.046e-7■■■■□ 21.5
VDAC3-206ENST00000521158 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
VDAC3-206ENST00000521158 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.04
VDAC3-206ENST00000521158 CLASP1Q7Z460 1538 aa14.76□□□□□ -0.05
VDAC3-206ENST00000521158 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
VDAC3-206ENST00000521158 FBLN2P98095 1184 aa14.7□□□□□ -0.06
VDAC3-206ENST00000521158 POLA1P09884 1462 aaPredicted RBP14.69□□□□□ -0.06
VDAC3-206ENST00000521158 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
VDAC3-206ENST00000521158 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
VDAC3-206ENST00000521158 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
VDAC3-206ENST00000521158 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
VDAC3-206ENST00000521158 RAD54L2Q9Y4B4 1467 aa14.63□□□□□ -0.07
VDAC3-206ENST00000521158 TDRD9Q8NDG6 1382 aaKnown RBP14.61□□□□□ -0.07
VDAC3-206ENST00000521158 MAGI1Q96QZ7 1491 aaPredicted RBP14.59□□□□□ -0.07
VDAC3-206ENST00000521158 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
VDAC3-206ENST00000521158 SOGA1O94964 1423 aa14.58□□□□□ -0.07
VDAC3-206ENST00000521158 GAPVD1Q14C86 1478 aa14.58□□□□□ -0.08
VDAC3-206ENST00000521158 SYNJ2O15056 1496 aa14.56□□□□□ -0.08
VDAC3-206ENST00000521158 CHMP7Q8WUX9 453 aaPredicted RBP14.55□□□□□ -0.08
VDAC3-206ENST00000521158 GRIN2BQ13224 1484 aa14.53□□□□□ -0.08
VDAC3-206ENST00000521158 FGD5Q6ZNL6 1462 aa14.5□□□□□ -0.09
VDAC3-206ENST00000521158 RTN4Q9NQC3 1192 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms