RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-209ENST00000574997 NISCHQ9Y2I1 1504 aa16.17■□□□□ 0.18
TRIM25-209ENST00000574997 ABCC9O60706 1549 aa14.66□□□□□ -0.06
TRIM25-209ENST00000574997 CCDC180Q9P1Z9 1646 aa14.55□□□□□ -0.08
TRIM25-209ENST00000574997 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
TRIM25-209ENST00000574997 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
TRIM25-209ENST00000574997 NACADO15069 1562 aa13.81□□□□□ -0.2
TRIM25-209ENST00000574997 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
TRIM25-209ENST00000574997 MYO15BQ96JP2 1530 aa13.65□□□□□ -0.22
TRIM25-209ENST00000574997 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRIM25-209ENST00000574997 UNC13AQ9UPW8 1703 aa13.56□□□□□ -0.24
TRIM25-209ENST00000574997 BICRAQ9NZM4 1560 aa13.47□□□□□ -0.25
TRIM25-209ENST00000574997 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
TRIM25-209ENST00000574997 SHROOM4Q9ULL8 1493 aa13.37□□□□□ -0.27
TRIM25-209ENST00000574997 ZCCHC6Q5VYS8 1495 aaKnown RBP13.36□□□□□ -0.27
TRIM25-209ENST00000574997 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
TRIM25-209ENST00000574997 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
TRIM25-209ENST00000574997 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
TRIM25-209ENST00000574997 SCRIBQ14160 1630 aa13.15□□□□□ -0.3
TRIM25-209ENST00000574997 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
TRIM25-209ENST00000574997 NCAPD3P42695 1498 aa12.75□□□□□ -0.37
TRIM25-209ENST00000574997 CUX2O14529 1486 aa12.72□□□□□ -0.37
TRIM25-209ENST00000574997 ERCC6Q03468 1493 aa12.67□□□□□ -0.38
TRIM25-209ENST00000574997 SMARCA2P51531 1590 aa12.65□□□□□ -0.38
TRIM25-209ENST00000574997 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
TRIM25-209ENST00000574997 HMGXB3Q12766 1538 aa12.62□□□□□ -0.39
TRIM25-209ENST00000574997 SMARCA4P51532 1647 aa12.59□□□□□ -0.39
TRIM25-209ENST00000574997 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
TRIM25-209ENST00000574997 NESP48681 1621 aa12.54□□□□□ -0.4
TRIM25-209ENST00000574997 PEG3Q9GZU2 1588 aa12.53□□□□□ -0.4
TRIM25-209ENST00000574997 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
TRIM25-209ENST00000574997 THOC2Q8NI27 1593 aaKnown RBP12.49□□□□□ -0.41
TRIM25-209ENST00000574997 LAMC3Q9Y6N6 1575 aa12.45□□□□□ -0.42
TRIM25-209ENST00000574997 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
TRIM25-209ENST00000574997 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
TRIM25-209ENST00000574997 KIF21AQ7Z4S6 1674 aa12.38□□□□□ -0.43
TRIM25-209ENST00000574997 CADPSQ9ULU8 1353 aa12.35□□□□□ -0.43
TRIM25-209ENST00000574997 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
TRIM25-209ENST00000574997 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
TRIM25-209ENST00000574997 WDR62O43379 1518 aa12.24□□□□□ -0.45
TRIM25-209ENST00000574997 WIZO95785 1651 aa12.24□□□□□ -0.45
TRIM25-209ENST00000574997 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
TRIM25-209ENST00000574997 CFTRP13569 1480 aa12.18□□□□□ -0.46
TRIM25-209ENST00000574997 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
TRIM25-209ENST00000574997 FANCD2Q9BXW9 1451 aa12.16□□□□□ -0.46
TRIM25-209ENST00000574997 TOP2AP11388 1531 aaKnown RBP12.13□□□□□ -0.47
TRIM25-209ENST00000574997 OSCARQ8IYS5 282 aa12.1□□□□□ -0.47
TRIM25-209ENST00000574997 URB2Q14146 1524 aaKnown RBP12.03□□□□□ -0.48
TRIM25-209ENST00000574997 AEBP2Q6ZN18 517 aaPredicted RBP12.03□□□□□ -0.48
TRIM25-209ENST00000574997 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
TRIM25-209ENST00000574997 ABCC8Q09428 1581 aa12.02□□□□□ -0.49
TRIM25-209ENST00000574997 RIMBP3CA6NJZ7 1639 aa12□□□□□ -0.49
TRIM25-209ENST00000574997 RIMBP3BA6NNM3 1639 aa12□□□□□ -0.49
TRIM25-209ENST00000574997 RIMBP3Q9UFD9 1639 aa12□□□□□ -0.49
TRIM25-209ENST00000574997 CCDC88BA6NC98 1476 aa12□□□□□ -0.49
TRIM25-209ENST00000574997 CHIC1Q5VXU3 224 aa11.99□□□□□ -0.49
TRIM25-209ENST00000574997 IFT140Q96RY7 1462 aa11.97□□□□□ -0.49
TRIM25-209ENST00000574997 ARHGEF11O15085 1522 aa11.94□□□□□ -0.5
TRIM25-209ENST00000574997 ZNF608Q9ULD9 1512 aaPredicted RBP11.93□□□□□ -0.5
TRIM25-209ENST00000574997 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
TRIM25-209ENST00000574997 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
TRIM25-209ENST00000574997 DNMBPQ6XZF7 1577 aa11.88□□□□□ -0.51
TRIM25-209ENST00000574997 CHD1O14646 1710 aa11.82□□□□□ -0.52
TRIM25-209ENST00000574997 ARAP1Q96P48 1450 aa11.82□□□□□ -0.52
TRIM25-209ENST00000574997 TARBP1Q13395 1621 aaKnown RBP11.8□□□□□ -0.52
TRIM25-209ENST00000574997 WDR97A6NE52 1622 aa11.78□□□□□ -0.52
TRIM25-209ENST00000574997 SOGA1O94964 1423 aa11.78□□□□□ -0.52
TRIM25-209ENST00000574997 AQRO60306 1485 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRIM25-209ENST00000574997 POLA1P09884 1462 aaPredicted RBP11.78□□□□□ -0.52
TRIM25-209ENST00000574997 CYB5RLQ6IPT4 315 aa11.78□□□□□ -0.52
TRIM25-209ENST00000574997 FBLN2P98095 1184 aa11.75□□□□□ -0.53
TRIM25-209ENST00000574997 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
TRIM25-209ENST00000574997 TDRD9Q8NDG6 1382 aaKnown RBP11.71□□□□□ -0.53
TRIM25-209ENST00000574997 CHMP7Q8WUX9 453 aaPredicted RBP11.71□□□□□ -0.53
TRIM25-209ENST00000574997 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
TRIM25-209ENST00000574997 FGD5Q6ZNL6 1462 aa11.7□□□□□ -0.54
TRIM25-209ENST00000574997 MAGI1Q96QZ7 1491 aaPredicted RBP11.7□□□□□ -0.54
TRIM25-209ENST00000574997 CLASP1Q7Z460 1538 aa11.68□□□□□ -0.54
TRIM25-209ENST00000574997 GRIN2BQ13224 1484 aa11.68□□□□□ -0.54
TRIM25-209ENST00000574997 SNAPC4Q5SXM2 1469 aa11.67□□□□□ -0.54
TRIM25-209ENST00000574997 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
TRIM25-209ENST00000574997 CUX1P39880 1505 aa11.65□□□□□ -0.54
TRIM25-209ENST00000574997 SYNJ2O15056 1496 aa11.64□□□□□ -0.55
TRIM25-209ENST00000574997 GAPVD1Q14C86 1478 aa11.62□□□□□ -0.55
TRIM25-209ENST00000574997 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
TRIM25-209ENST00000574997 WRNQ14191 1432 aaPredicted RBP eCLIP11.58□□□□□ -0.561e-7■■■■■ 66.8
TRIM25-209ENST00000574997 SUPT5HO00267 1087 aaKnown RBP11.57□□□□□ -0.56
TRIM25-209ENST00000574997 PBRM1Q86U86 1689 aa11.56□□□□□ -0.56
TRIM25-209ENST00000574997 ABCA5Q8WWZ7 1642 aa11.54□□□□□ -0.56
TRIM25-209ENST00000574997 GRIN2AQ12879 1464 aa11.51□□□□□ -0.57
TRIM25-209ENST00000574997 TOP2BQ02880 1626 aa11.5□□□□□ -0.57
TRIM25-209ENST00000574997 FHAD1B1AJZ9 1412 aa11.5□□□□□ -0.57
TRIM25-209ENST00000574997 ERCC6L2Q5T890 1561 aa11.5□□□□□ -0.57
TRIM25-209ENST00000574997 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
TRIM25-209ENST00000574997 NUP160Q12769 1436 aa11.48□□□□□ -0.57
TRIM25-209ENST00000574997 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
TRIM25-209ENST00000574997 ADAMTS12P58397 1594 aa11.45□□□□□ -0.58
TRIM25-209ENST00000574997 CEP170Q5SW79 1584 aa11.43□□□□□ -0.58
TRIM25-209ENST00000574997 JPH4Q96JJ6 628 aa11.42□□□□□ -0.58
TRIM25-209ENST00000574997 SHROOM2Q13796 1616 aa11.42□□□□□ -0.58
TRIM25-209ENST00000574997 KIF13AQ9H1H9 1805 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms