RNA–Protein interactions for RNA: ENST00000544368.6

CCT2-203, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 5 BASIC

Gene CCT2, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-203ENST00000544368 NISCHQ9Y2I1 1504 aa22.64■■□□□ 1.22
CCT2-203ENST00000544368 CCDC180Q9P1Z9 1646 aa20.18■□□□□ 0.82
CCT2-203ENST00000544368 ABCC9O60706 1549 aa19.9■□□□□ 0.78
CCT2-203ENST00000544368 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
CCT2-203ENST00000544368 NACADO15069 1562 aa19.02■□□□□ 0.63
CCT2-203ENST00000544368 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.61
CCT2-203ENST00000544368 MYO15BQ96JP2 1530 aa18.89■□□□□ 0.61
CCT2-203ENST00000544368 ZCCHC6Q5VYS8 1495 aaKnown RBP18.83■□□□□ 0.6
CCT2-203ENST00000544368 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
CCT2-203ENST00000544368 UNC13AQ9UPW8 1703 aa18.68■□□□□ 0.58
CCT2-203ENST00000544368 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCT2-203ENST00000544368 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
CCT2-203ENST00000544368 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
CCT2-203ENST00000544368 SCRIBQ14160 1630 aa18.37■□□□□ 0.53
CCT2-203ENST00000544368 SHROOM4Q9ULL8 1493 aa18.3■□□□□ 0.52
CCT2-203ENST00000544368 EIF4G1Q04637 1599 aaKnown RBP18.05■□□□□ 0.48
CCT2-203ENST00000544368 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
CCT2-203ENST00000544368 CECR2Q9BXF3 1484 aa17.9■□□□□ 0.46
CCT2-203ENST00000544368 AEBP2Q6ZN18 517 aaPredicted RBP17.85■□□□□ 0.45
CCT2-203ENST00000544368 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
CCT2-203ENST00000544368 NCAPD3P42695 1498 aa17.58■□□□□ 0.41
CCT2-203ENST00000544368 ATAD2BQ9ULI0 1458 aa17.56■□□□□ 0.4
CCT2-203ENST00000544368 BAZ1AQ9NRL2 1556 aaPredicted RBP17.53■□□□□ 0.4
CCT2-203ENST00000544368 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
CCT2-203ENST00000544368 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
CCT2-203ENST00000544368 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
CCT2-203ENST00000544368 HMGXB3Q12766 1538 aa17.45■□□□□ 0.38
CCT2-203ENST00000544368 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
CCT2-203ENST00000544368 WIZO95785 1651 aa17.24■□□□□ 0.35
CCT2-203ENST00000544368 NESP48681 1621 aa17.2■□□□□ 0.34
CCT2-203ENST00000544368 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
CCT2-203ENST00000544368 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
CCT2-203ENST00000544368 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
CCT2-203ENST00000544368 ERCC6Q03468 1493 aa17.11■□□□□ 0.33
CCT2-203ENST00000544368 CUX2O14529 1486 aa17.05■□□□□ 0.32
CCT2-203ENST00000544368 CADPSQ9ULU8 1353 aa17.04■□□□□ 0.32
CCT2-203ENST00000544368 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
CCT2-203ENST00000544368 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
CCT2-203ENST00000544368 PDS5BQ9NTI5 1447 aa16.98■□□□□ 0.31
CCT2-203ENST00000544368 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
CCT2-203ENST00000544368 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
CCT2-203ENST00000544368 CFTRP13569 1480 aa16.92■□□□□ 0.3
CCT2-203ENST00000544368 CCDC88BA6NC98 1476 aa16.85■□□□□ 0.29
CCT2-203ENST00000544368 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
CCT2-203ENST00000544368 MRC2Q9UBG0 1479 aa16.82■□□□□ 0.28
CCT2-203ENST00000544368 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
CCT2-203ENST00000544368 WDR62O43379 1518 aa16.8■□□□□ 0.28
CCT2-203ENST00000544368 DNAJC5Q9H3Z4 198 aa16.76■□□□□ 0.27
CCT2-203ENST00000544368 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
CCT2-203ENST00000544368 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
CCT2-203ENST00000544368 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
CCT2-203ENST00000544368 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
CCT2-203ENST00000544368 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
CCT2-203ENST00000544368 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
CCT2-203ENST00000544368 ZNF608Q9ULD9 1512 aaPredicted RBP16.44■□□□□ 0.22
CCT2-203ENST00000544368 POLA1P09884 1462 aaPredicted RBP16.41■□□□□ 0.22
CCT2-203ENST00000544368 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
CCT2-203ENST00000544368 CUX1P39880 1505 aa16.38■□□□□ 0.21
CCT2-203ENST00000544368 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
CCT2-203ENST00000544368 RAD54L2Q9Y4B4 1467 aa16.34■□□□□ 0.21
CCT2-203ENST00000544368 FGD5Q6ZNL6 1462 aa16.32■□□□□ 0.2
CCT2-203ENST00000544368 AQRO60306 1485 aaKnown RBP eCLIP16.32■□□□□ 0.26e-7■■■■□ 24.4
CCT2-203ENST00000544368 SOGA1O94964 1423 aa16.31■□□□□ 0.2
CCT2-203ENST00000544368 OSCARQ8IYS5 282 aa16.3■□□□□ 0.2
CCT2-203ENST00000544368 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
CCT2-203ENST00000544368 WDR97A6NE52 1622 aa16.23■□□□□ 0.19
CCT2-203ENST00000544368 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
CCT2-203ENST00000544368 TOP2BQ02880 1626 aa16.18■□□□□ 0.18
CCT2-203ENST00000544368 BIVM-ERCC5R4GMW8 1640 aa16.18■□□□□ 0.18
CCT2-203ENST00000544368 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
CCT2-203ENST00000544368 ABCA10Q8WWZ4 1543 aa16.17■□□□□ 0.18
CCT2-203ENST00000544368 CHD1O14646 1710 aa16.17■□□□□ 0.18
CCT2-203ENST00000544368 GRIN2BQ13224 1484 aa16.14■□□□□ 0.17
CCT2-203ENST00000544368 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
CCT2-203ENST00000544368 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
CCT2-203ENST00000544368 GAPVD1Q14C86 1478 aa16.12■□□□□ 0.17
CCT2-203ENST00000544368 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
CCT2-203ENST00000544368 PBRM1Q86U86 1689 aa16.09■□□□□ 0.17
CCT2-203ENST00000544368 FBLN2P98095 1184 aa16.08■□□□□ 0.17
CCT2-203ENST00000544368 RIMBP3CA6NJZ7 1639 aa16.08■□□□□ 0.16
CCT2-203ENST00000544368 RIMBP3BA6NNM3 1639 aa16.08■□□□□ 0.16
CCT2-203ENST00000544368 RIMBP3Q9UFD9 1639 aa16.08■□□□□ 0.16
CCT2-203ENST00000544368 SYNJ2O15056 1496 aa16.06■□□□□ 0.16
CCT2-203ENST00000544368 ARHGEF11O15085 1522 aa16.05■□□□□ 0.16
CCT2-203ENST00000544368 TRIM41Q8WV44 630 aa16.05■□□□□ 0.16
CCT2-203ENST00000544368 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
CCT2-203ENST00000544368 CLASP1Q7Z460 1538 aa16.02■□□□□ 0.15
CCT2-203ENST00000544368 ADAMTS12P58397 1594 aa15.96■□□□□ 0.15
CCT2-203ENST00000544368 ERICH3Q5RHP9 1530 aa15.96■□□□□ 0.15
CCT2-203ENST00000544368 GRIN2AQ12879 1464 aa15.94■□□□□ 0.14
CCT2-203ENST00000544368 FHAD1B1AJZ9 1412 aa15.92■□□□□ 0.14
CCT2-203ENST00000544368 ARAP1Q96P48 1450 aa15.92■□□□□ 0.14
CCT2-203ENST00000544368 NUP160Q12769 1436 aa15.9■□□□□ 0.14
CCT2-203ENST00000544368 CYB5RLQ6IPT4 315 aa15.9■□□□□ 0.14
CCT2-203ENST00000544368 CEP170Q5SW79 1584 aa15.89■□□□□ 0.13
CCT2-203ENST00000544368 IGF1RP08069 1367 aa15.85■□□□□ 0.13
CCT2-203ENST00000544368 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
CCT2-203ENST00000544368 SHROOM2Q13796 1616 aa15.8■□□□□ 0.12
CCT2-203ENST00000544368 ERCC6L2Q5T890 1561 aa15.8■□□□□ 0.12
CCT2-203ENST00000544368 CUL7Q14999 1698 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms