RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 AEBP2Q6ZN18 517 aaPredicted RBP34.38■■■■□ 3.09
LIMK2-209ENST00000482270 CHIC1Q5VXU3 224 aa33.36■■■□□ 2.93
LIMK2-209ENST00000482270 PHF23Q9BUL5 403 aaPredicted RBP29.37■■■□□ 2.29
LIMK2-209ENST00000482270 SENP3Q9H4L4 574 aaPredicted RBP29.12■■■□□ 2.25
LIMK2-209ENST00000482270 FOXD1Q16676 465 aa27.1■■□□□ 1.93
LIMK2-209ENST00000482270 PLPPR3Q6T4P5 718 aa27.03■■□□□ 1.92
LIMK2-209ENST00000482270 ADRA2BP18089 450 aa26.02■■□□□ 1.76
LIMK2-209ENST00000482270 PPP6R1Q9UPN7 881 aa26■■□□□ 1.75
LIMK2-209ENST00000482270 PIAS4Q8N2W9 510 aaPredicted RBP25.6■■□□□ 1.69
LIMK2-209ENST00000482270 MSH5O43196 834 aa24.97■■□□□ 1.59
LIMK2-209ENST00000482270 PPP4R3CPQ6ZMV5 832 aa23.85■■□□□ 1.41
LIMK2-209ENST00000482270 MAPK8IP2Q13387 824 aaPredicted RBP23.66■■□□□ 1.38
LIMK2-209ENST00000482270 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
LIMK2-209ENST00000482270 DMRT2Q9Y5R5 561 aa23.22■■□□□ 1.31
LIMK2-209ENST00000482270 KCNA4P22459 653 aa23.21■■□□□ 1.31
LIMK2-209ENST00000482270 CNKSR2Q8WXI2 1034 aa23.15■■□□□ 1.3
LIMK2-209ENST00000482270 NCBP3Q53F19 620 aaKnown RBP23.13■■□□□ 1.29
LIMK2-209ENST00000482270 POTEDQ86YR6 584 aa23.07■■□□□ 1.28
LIMK2-209ENST00000482270 NPM3O75607 178 aaKnown RBP22.86■■□□□ 1.25
LIMK2-209ENST00000482270 RNF216Q9NWF9 866 aaPredicted RBP22.7■■□□□ 1.22
LIMK2-209ENST00000482270 HOXD11P31277 338 aaPredicted RBP22.63■■□□□ 1.21
LIMK2-209ENST00000482270 DCAF8L1A6NGE4 600 aa22.48■■□□□ 1.19
LIMK2-209ENST00000482270 SLC4A1APQ9BWU0 796 aaKnown RBP22.06■■□□□ 1.12
LIMK2-209ENST00000482270 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
LIMK2-209ENST00000482270 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
LIMK2-209ENST00000482270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.74■■□□□ 1.07
LIMK2-209ENST00000482270 SLC4A2P04920 1241 aa21.6■■□□□ 1.05
LIMK2-209ENST00000482270 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
LIMK2-209ENST00000482270 RNF39Q9H2S5 420 aa21.4■■□□□ 1.02
LIMK2-209ENST00000482270 ZBTB22O15209 634 aa21.35■■□□□ 1.01
LIMK2-209ENST00000482270 FOXD4L1Q9NU39 408 aa21.34■■□□□ 1.01
LIMK2-209ENST00000482270 U3KPZ7 1027 aaPredicted RBP21.33■■□□□ 1.01
LIMK2-209ENST00000482270 MYCNP04198 464 aaPredicted RBP21.09■□□□□ 0.97
LIMK2-209ENST00000482270 C1QBPQ07021 282 aaKnown RBP21.09■□□□□ 0.97
LIMK2-209ENST00000482270 CSRNP3Q8WYN3 585 aa21.07■□□□□ 0.96
LIMK2-209ENST00000482270 CACNB1Q02641 598 aaPredicted RBP21.06■□□□□ 0.96
LIMK2-209ENST00000482270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.9■□□□□ 0.94
LIMK2-209ENST00000482270 HNRNPUL2Q1KMD3 747 aaKnown RBP20.9■□□□□ 0.94
LIMK2-209ENST00000482270 SAMD1Q6SPF0 538 aaPredicted RBP20.86■□□□□ 0.93
LIMK2-209ENST00000482270 SPINK5Q9NQ38 1064 aaPredicted RBP20.84■□□□□ 0.93
LIMK2-209ENST00000482270 CAPN15O75808 1086 aa20.79■□□□□ 0.92
LIMK2-209ENST00000482270 APLP2Q06481 763 aa20.72■□□□□ 0.91
LIMK2-209ENST00000482270 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
LIMK2-209ENST00000482270 ATF5Q9Y2D1 282 aaPredicted RBP20.63■□□□□ 0.89
LIMK2-209ENST00000482270 ZNF219Q9P2Y4 722 aaPredicted RBP20.51■□□□□ 0.87
LIMK2-209ENST00000482270 ATXN8OSP0DMR3 200 aa20.46■□□□□ 0.87
LIMK2-209ENST00000482270 ABCB7O75027 752 aa20.44■□□□□ 0.86
LIMK2-209ENST00000482270 DSG3P32926 999 aa20.35■□□□□ 0.85
LIMK2-209ENST00000482270 POLA2Q14181 598 aa20.23■□□□□ 0.83
LIMK2-209ENST00000482270 ZBTB12Q9Y330 459 aaPredicted RBP19.76■□□□□ 0.75
LIMK2-209ENST00000482270 FBLN2P98095 1184 aa19.72■□□□□ 0.75
LIMK2-209ENST00000482270 MKRN4PQ13434 485 aaPredicted RBP19.68■□□□□ 0.74
LIMK2-209ENST00000482270 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
LIMK2-209ENST00000482270 OSCARQ8IYS5 282 aa19.61■□□□□ 0.73
LIMK2-209ENST00000482270 ABCC9O60706 1549 aa19.47■□□□□ 0.71
LIMK2-209ENST00000482270 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
LIMK2-209ENST00000482270 SPDYE2BA6NHP3 402 aa19.24■□□□□ 0.67
LIMK2-209ENST00000482270 SPDYE6P0CI01 402 aa19.24■□□□□ 0.67
LIMK2-209ENST00000482270 SPDYE2Q495Y8 402 aa19.24■□□□□ 0.67
LIMK2-209ENST00000482270 ZNF692Q9BU19 519 aaPredicted RBP19.24■□□□□ 0.67
LIMK2-209ENST00000482270 SPDYE4A6NLX3 237 aa19.19■□□□□ 0.66
LIMK2-209ENST00000482270 FKBP8Q14318 412 aa19.16■□□□□ 0.66
LIMK2-209ENST00000482270 AKT1S1Q96B36 256 aa19.08■□□□□ 0.64
LIMK2-209ENST00000482270 SSUH2Q9Y2M2 353 aa19.07■□□□□ 0.64
LIMK2-209ENST00000482270 PABPN1Q86U42 306 aaKnown RBP eCLIP19■□□□□ 0.63
LIMK2-209ENST00000482270 REM2Q8IYK8 340 aaPredicted RBP18.96■□□□□ 0.63
LIMK2-209ENST00000482270 CLEC11AQ9Y240 323 aa18.83■□□□□ 0.6
LIMK2-209ENST00000482270 PITPNM1O00562 1244 aa18.79■□□□□ 0.6
LIMK2-209ENST00000482270 SPDYE1Q8NFV5 336 aaPredicted RBP18.74■□□□□ 0.59
LIMK2-209ENST00000482270 CHRDL2Q6WN34 429 aa18.68■□□□□ 0.58
LIMK2-209ENST00000482270 PROM2Q8N271 834 aa18.68■□□□□ 0.58
LIMK2-209ENST00000482270 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
LIMK2-209ENST00000482270 PRR29P0C7W0 189 aa18.53■□□□□ 0.56
LIMK2-209ENST00000482270 STAG3Q9UJ98 1225 aa18.52■□□□□ 0.56
LIMK2-209ENST00000482270 NACADO15069 1562 aa18.48■□□□□ 0.55
LIMK2-209ENST00000482270 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
LIMK2-209ENST00000482270 PIP4P2Q8N4L2 257 aa18.42■□□□□ 0.54
LIMK2-209ENST00000482270 CHADLQ6NUI6 762 aa18.38■□□□□ 0.53
LIMK2-209ENST00000482270 FXR2P51116 673 aaKnown RBP eCLIP18.36■□□□□ 0.53
LIMK2-209ENST00000482270 FBXO3Q9UK99 471 aa18.36■□□□□ 0.53
LIMK2-209ENST00000482270 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
LIMK2-209ENST00000482270 PRKAR2AP13861 404 aaKnown RBP18.34■□□□□ 0.53
LIMK2-209ENST00000482270 POTEHQ6S545 545 aa18.25■□□□□ 0.51
LIMK2-209ENST00000482270 MIER1Q8N108 512 aa18.25■□□□□ 0.51
LIMK2-209ENST00000482270 PLCD3Q8N3E9 789 aa18.24■□□□□ 0.51
LIMK2-209ENST00000482270 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
LIMK2-209ENST00000482270 CREBZFQ9NS37 354 aa18.23■□□□□ 0.51
LIMK2-209ENST00000482270 MYO15BQ96JP2 1530 aa18.22■□□□□ 0.51
LIMK2-209ENST00000482270 VASPP50552 380 aaPredicted RBP18.2■□□□□ 0.5
LIMK2-209ENST00000482270 PLEKHG5O94827 1062 aa18.12■□□□□ 0.49
LIMK2-209ENST00000482270 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.49
LIMK2-209ENST00000482270 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.48
LIMK2-209ENST00000482270 FARP1Q9Y4F1 1045 aaPredicted RBP18.07■□□□□ 0.48
LIMK2-209ENST00000482270 KLHL34Q8N239 644 aa18.01■□□□□ 0.47
LIMK2-209ENST00000482270 SCRIBQ14160 1630 aa18■□□□□ 0.47
LIMK2-209ENST00000482270 MNX1P50219 401 aaPredicted RBP17.97■□□□□ 0.47
LIMK2-209ENST00000482270 HAX1O00165 279 aa17.93■□□□□ 0.46
LIMK2-209ENST00000482270 IFNLR1Q8IU57 520 aaPredicted RBP17.93■□□□□ 0.46
LIMK2-209ENST00000482270 NPM1P06748 294 aaKnown RBP eCLIP17.9■□□□□ 0.46
LIMK2-209ENST00000482270 ZBTB47Q9UFB7 747 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms