RNA–Protein interactions for RNA: ENST00000491568.6

ARMCX3-206, Transcript of armadillo repeat containing X-linked 3, humanhuman

TSL 1 (best)

Gene ARMCX3, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARMCX3-206ENST00000491568 NISCHQ9Y2I1 1504 aa46.18■■■■■ 4.98
ARMCX3-206ENST00000491568 CCDC180Q9P1Z9 1646 aa41.61■■■■■ 4.25
ARMCX3-206ENST00000491568 ABCC9O60706 1549 aa41.39■■■■■ 4.22
ARMCX3-206ENST00000491568 RB1CC1Q8TDY2 1594 aa39.58■■■■□ 3.93
ARMCX3-206ENST00000491568 NACADO15069 1562 aa39.32■■■■□ 3.88
ARMCX3-206ENST00000491568 MYO15BQ96JP2 1530 aa38.88■■■■□ 3.81
ARMCX3-206ENST00000491568 DNAJC5BQ9UF47 199 aa38.73■■■■□ 3.79
ARMCX3-206ENST00000491568 DCAF8L2P0C7V8 631 aa38.7■■■■□ 3.79
ARMCX3-206ENST00000491568 UNC13AQ9UPW8 1703 aa38.54■■■■□ 3.76
ARMCX3-206ENST00000491568 PABPN1Q86U42 306 aaKnown RBP eCLIP38.4■■■■□ 3.74
ARMCX3-206ENST00000491568 DCAF1Q9Y4B6 1507 aa38.31■■■■□ 3.72
ARMCX3-206ENST00000491568 BICRAQ9NZM4 1560 aa38.31■■■■□ 3.72
ARMCX3-206ENST00000491568 ZCCHC6Q5VYS8 1495 aaKnown RBP38.3■■■■□ 3.72
ARMCX3-206ENST00000491568 SHROOM4Q9ULL8 1493 aa38.12■■■■□ 3.69
ARMCX3-206ENST00000491568 SCRIBQ14160 1630 aa37.68■■■■□ 3.62
ARMCX3-206ENST00000491568 CC2D2AQ9P2K1 1620 aa37.47■■■■□ 3.59
ARMCX3-206ENST00000491568 EIF4G1Q04637 1599 aaKnown RBP37.42■■■■□ 3.58
ARMCX3-206ENST00000491568 CECR2Q9BXF3 1484 aa37.38■■■■□ 3.57
ARMCX3-206ENST00000491568 NCAPD3P42695 1498 aa36.25■■■■□ 3.39
ARMCX3-206ENST00000491568 SMARCA2P51531 1590 aa36.07■■■■□ 3.37
ARMCX3-206ENST00000491568 ATAD2BQ9ULI0 1458 aa36.07■■■■□ 3.37
ARMCX3-206ENST00000491568 HMGXB3Q12766 1538 aa36.04■■■■□ 3.36
ARMCX3-206ENST00000491568 SMARCA4P51532 1647 aa36.04■■■■□ 3.36
ARMCX3-206ENST00000491568 CUX2O14529 1486 aa35.92■■■■□ 3.34
ARMCX3-206ENST00000491568 BAZ1AQ9NRL2 1556 aaPredicted RBP35.92■■■■□ 3.34
ARMCX3-206ENST00000491568 ERCC6Q03468 1493 aa35.84■■■■□ 3.33
ARMCX3-206ENST00000491568 PEG3Q9GZU2 1588 aa35.81■■■■□ 3.32
ARMCX3-206ENST00000491568 DNAJC5Q9H3Z4 198 aa35.8■■■■□ 3.32
ARMCX3-206ENST00000491568 BAZ1BQ9UIG0 1483 aaKnown RBP35.74■■■■□ 3.31
ARMCX3-206ENST00000491568 NESP48681 1621 aa35.5■■■■□ 3.27
ARMCX3-206ENST00000491568 LAMC3Q9Y6N6 1575 aa35.49■■■■□ 3.27
ARMCX3-206ENST00000491568 MROH2BQ7Z745 1585 aa35.48■■■■□ 3.27
ARMCX3-206ENST00000491568 THOC2Q8NI27 1593 aaKnown RBP35.32■■■■□ 3.24
ARMCX3-206ENST00000491568 PDS5BQ9NTI5 1447 aa35.25■■■■□ 3.23
ARMCX3-206ENST00000491568 KIF21AQ7Z4S6 1674 aa35.13■■■■□ 3.21
ARMCX3-206ENST00000491568 CADPSQ9ULU8 1353 aa35.1■■■■□ 3.21
ARMCX3-206ENST00000491568 WIZO95785 1651 aa35.03■■■■□ 3.2
ARMCX3-206ENST00000491568 MRC2Q9UBG0 1479 aa34.92■■■■□ 3.18
ARMCX3-206ENST00000491568 WDR62O43379 1518 aa34.87■■■■□ 3.17
ARMCX3-206ENST00000491568 CEP164Q9UPV0 1460 aa34.78■■■■□ 3.16
ARMCX3-206ENST00000491568 RSF1Q96T23 1441 aaPredicted RBP34.75■■■■□ 3.15
ARMCX3-206ENST00000491568 TOP2AP11388 1531 aaKnown RBP34.73■■■■□ 3.15
ARMCX3-206ENST00000491568 CFTRP13569 1480 aa34.72■■■■□ 3.15
ARMCX3-206ENST00000491568 FANCD2Q9BXW9 1451 aa34.69■■■■□ 3.14
ARMCX3-206ENST00000491568 PRDM2Q13029 1718 aa34.42■■■■□ 3.1
ARMCX3-206ENST00000491568 URB2Q14146 1524 aaKnown RBP34.36■■■■□ 3.09
ARMCX3-206ENST00000491568 CCDC88BA6NC98 1476 aa34.22■■■■□ 3.07
ARMCX3-206ENST00000491568 OSCARQ8IYS5 282 aa34.12■■■■□ 3.05
ARMCX3-206ENST00000491568 IFT140Q96RY7 1462 aa34.1■■■■□ 3.05
ARMCX3-206ENST00000491568 ABCC8Q09428 1581 aa34.09■■■■□ 3.05
ARMCX3-206ENST00000491568 TRIM41Q8WV44 630 aa34.04■■■■□ 3.04
ARMCX3-206ENST00000491568 TOPBP1Q92547 1522 aa34.02■■■■□ 3.04
ARMCX3-206ENST00000491568 DNMBPQ6XZF7 1577 aa33.95■■■■□ 3.03
ARMCX3-206ENST00000491568 ZNF608Q9ULD9 1512 aaPredicted RBP33.89■■■■□ 3.02
ARMCX3-206ENST00000491568 EIF4G3O43432 1585 aaKnown RBP33.82■■■■□ 3
ARMCX3-206ENST00000491568 TARBP1Q13395 1621 aaKnown RBP33.74■■■□□ 2.99
ARMCX3-206ENST00000491568 RIMBP3CA6NJZ7 1639 aa33.69■■■□□ 2.98
ARMCX3-206ENST00000491568 RIMBP3BA6NNM3 1639 aa33.69■■■□□ 2.98
ARMCX3-206ENST00000491568 RIMBP3Q9UFD9 1639 aa33.69■■■□□ 2.98
ARMCX3-206ENST00000491568 POLA1P09884 1462 aaPredicted RBP33.67■■■□□ 2.98
ARMCX3-206ENST00000491568 ARHGEF11O15085 1522 aa33.61■■■□□ 2.97
ARMCX3-206ENST00000491568 WDR97A6NE52 1622 aa33.61■■■□□ 2.97
ARMCX3-206ENST00000491568 AQRO60306 1485 aaKnown RBP eCLIP33.56■■■□□ 2.967e-9■■■■■ 35.6
ARMCX3-206ENST00000491568 CHD1O14646 1710 aa33.52■■■□□ 2.96
ARMCX3-206ENST00000491568 SOGA1O94964 1423 aa33.48■■■□□ 2.95
ARMCX3-206ENST00000491568 FGD5Q6ZNL6 1462 aa33.43■■■□□ 2.94
ARMCX3-206ENST00000491568 RAD54L2Q9Y4B4 1467 aa33.43■■■□□ 2.94
ARMCX3-206ENST00000491568 CUX1P39880 1505 aa33.37■■■□□ 2.93
ARMCX3-206ENST00000491568 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
ARMCX3-206ENST00000491568 MAGI1Q96QZ7 1491 aaPredicted RBP33.34■■■□□ 2.93
ARMCX3-206ENST00000491568 SNAPC4Q5SXM2 1469 aa33.31■■■□□ 2.92
ARMCX3-206ENST00000491568 FBLN2P98095 1184 aa33.3■■■□□ 2.92
ARMCX3-206ENST00000491568 GRIN2BQ13224 1484 aa33.28■■■□□ 2.92
ARMCX3-206ENST00000491568 ARAP1Q96P48 1450 aa33.25■■■□□ 2.91
ARMCX3-206ENST00000491568 SYNJ1O43426 1573 aa33.23■■■□□ 2.91
ARMCX3-206ENST00000491568 CLASP1Q7Z460 1538 aa33.22■■■□□ 2.91
ARMCX3-206ENST00000491568 CYB5RLQ6IPT4 315 aa33.21■■■□□ 2.91
ARMCX3-206ENST00000491568 SYNJ2O15056 1496 aa33.19■■■□□ 2.9
ARMCX3-206ENST00000491568 CHMP7Q8WUX9 453 aaPredicted RBP33.15■■■□□ 2.9
ARMCX3-206ENST00000491568 ABCA10Q8WWZ4 1543 aa33.12■■■□□ 2.89
ARMCX3-206ENST00000491568 PBRM1Q86U86 1689 aa33.11■■■□□ 2.89
ARMCX3-206ENST00000491568 GAPVD1Q14C86 1478 aa33.11■■■□□ 2.89
ARMCX3-206ENST00000491568 ABCA5Q8WWZ7 1642 aa33.07■■■□□ 2.88
ARMCX3-206ENST00000491568 WRNQ14191 1432 aaPredicted RBP eCLIP32.97■■■□□ 2.87
ARMCX3-206ENST00000491568 SUPT5HO00267 1087 aaKnown RBP32.96■■■□□ 2.87
ARMCX3-206ENST00000491568 BIVM-ERCC5R4GMW8 1640 aa32.91■■■□□ 2.86
ARMCX3-206ENST00000491568 TOP2BQ02880 1626 aa32.91■■■□□ 2.86
ARMCX3-206ENST00000491568 TRHP20396 242 aaPredicted RBP32.87■■■□□ 2.85
ARMCX3-206ENST00000491568 GRIN2AQ12879 1464 aa32.83■■■□□ 2.85
ARMCX3-206ENST00000491568 ADAMTS12P58397 1594 aa32.83■■■□□ 2.85
ARMCX3-206ENST00000491568 ERICH3Q5RHP9 1530 aa32.75■■■□□ 2.83
ARMCX3-206ENST00000491568 NUP160Q12769 1436 aa32.75■■■□□ 2.83
ARMCX3-206ENST00000491568 FHAD1B1AJZ9 1412 aa32.73■■■□□ 2.83
ARMCX3-206ENST00000491568 CEP170Q5SW79 1584 aa32.66■■■□□ 2.82
ARMCX3-206ENST00000491568 SHROOM2Q13796 1616 aa32.63■■■□□ 2.81
ARMCX3-206ENST00000491568 ERCC6L2Q5T890 1561 aa32.53■■■□□ 2.8
ARMCX3-206ENST00000491568 RUSC2Q8N2Y8 1516 aa32.37■■■□□ 2.77
ARMCX3-206ENST00000491568 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
ARMCX3-206ENST00000491568 JPH4Q96JJ6 628 aa32.3■■■□□ 2.76
ARMCX3-206ENST00000491568 CUL7Q14999 1698 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms