RNA–Protein interactions for RNA: ENST00000584336.1

CDK12-208, Transcript of cyclin dependent kinase 12, humanhuman

Gene CDK12, Length 1,963 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-208ENST00000584336 NISCHQ9Y2I1 1504 aa23.51■■□□□ 1.35
CDK12-208ENST00000584336 CCDC180Q9P1Z9 1646 aa20.33■□□□□ 0.85
CDK12-208ENST00000584336 ABCC9O60706 1549 aa19.82■□□□□ 0.76
CDK12-208ENST00000584336 ZCCHC6Q5VYS8 1495 aaKnown RBP19.74■□□□□ 0.75
CDK12-208ENST00000584336 DCAF8L2P0C7V8 631 aa19.62■□□□□ 0.73
CDK12-208ENST00000584336 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
CDK12-208ENST00000584336 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
CDK12-208ENST00000584336 NACADO15069 1562 aa19.08■□□□□ 0.64
CDK12-208ENST00000584336 RB1CC1Q8TDY2 1594 aa19.08■□□□□ 0.64
CDK12-208ENST00000584336 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
CDK12-208ENST00000584336 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
CDK12-208ENST00000584336 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
CDK12-208ENST00000584336 UNC13AQ9UPW8 1703 aa18.64■□□□□ 0.57
CDK12-208ENST00000584336 PABPN1Q86U42 306 aaKnown RBP eCLIP18.54■□□□□ 0.56
CDK12-208ENST00000584336 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.56
CDK12-208ENST00000584336 CECR2Q9BXF3 1484 aa18.4■□□□□ 0.54
CDK12-208ENST00000584336 RSF1Q96T23 1441 aaPredicted RBP18.31■□□□□ 0.52
CDK12-208ENST00000584336 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
CDK12-208ENST00000584336 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
CDK12-208ENST00000584336 WIZO95785 1651 aa18.12■□□□□ 0.49
CDK12-208ENST00000584336 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
CDK12-208ENST00000584336 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
CDK12-208ENST00000584336 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
CDK12-208ENST00000584336 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
CDK12-208ENST00000584336 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
CDK12-208ENST00000584336 TOP2AP11388 1531 aaKnown RBP17.81■□□□□ 0.44
CDK12-208ENST00000584336 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.44
CDK12-208ENST00000584336 PEG3Q9GZU2 1588 aa17.75■□□□□ 0.43
CDK12-208ENST00000584336 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
CDK12-208ENST00000584336 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
CDK12-208ENST00000584336 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
CDK12-208ENST00000584336 NCAPD3P42695 1498 aa17.62■□□□□ 0.41
CDK12-208ENST00000584336 HMGXB3Q12766 1538 aa17.5■□□□□ 0.39
CDK12-208ENST00000584336 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
CDK12-208ENST00000584336 ABCC8Q09428 1581 aa17.43■□□□□ 0.38
CDK12-208ENST00000584336 LOC105371045A0A1W2PR82 267 aa17.33■□□□□ 0.36
CDK12-208ENST00000584336 FAM9AQ8IZU1 332 aaPredicted RBP17.32■□□□□ 0.36
CDK12-208ENST00000584336 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
CDK12-208ENST00000584336 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
CDK12-208ENST00000584336 CFTRP13569 1480 aa17.19■□□□□ 0.34
CDK12-208ENST00000584336 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
CDK12-208ENST00000584336 NESP48681 1621 aa17.17■□□□□ 0.34
CDK12-208ENST00000584336 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.34
CDK12-208ENST00000584336 SOGA1O94964 1423 aa17.12■□□□□ 0.33
CDK12-208ENST00000584336 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
CDK12-208ENST00000584336 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
CDK12-208ENST00000584336 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
CDK12-208ENST00000584336 CUX1P39880 1505 aa17.04■□□□□ 0.32
CDK12-208ENST00000584336 PRDM2Q13029 1718 aa17.03■□□□□ 0.32
CDK12-208ENST00000584336 TOP2BQ02880 1626 aa17.01■□□□□ 0.31
CDK12-208ENST00000584336 PDS5BQ9NTI5 1447 aa17.01■□□□□ 0.31
CDK12-208ENST00000584336 BIVM-ERCC5R4GMW8 1640 aa16.98■□□□□ 0.31
CDK12-208ENST00000584336 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
CDK12-208ENST00000584336 KIF21AQ7Z4S6 1674 aa16.94■□□□□ 0.3
CDK12-208ENST00000584336 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
CDK12-208ENST00000584336 CUX2O14529 1486 aa16.91■□□□□ 0.3
CDK12-208ENST00000584336 THOC2Q8NI27 1593 aaKnown RBP16.89■□□□□ 0.29
CDK12-208ENST00000584336 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
CDK12-208ENST00000584336 EEA1Q15075 1411 aa16.84■□□□□ 0.29
CDK12-208ENST00000584336 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
CDK12-208ENST00000584336 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.28
CDK12-208ENST00000584336 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
CDK12-208ENST00000584336 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
CDK12-208ENST00000584336 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
CDK12-208ENST00000584336 WDR62O43379 1518 aa16.78■□□□□ 0.28
CDK12-208ENST00000584336 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.28
CDK12-208ENST00000584336 UBTFP17480 764 aaKnown RBP16.74■□□□□ 0.27
CDK12-208ENST00000584336 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
CDK12-208ENST00000584336 RAPGEF2Q9Y4G8 1499 aa16.72■□□□□ 0.27
CDK12-208ENST00000584336 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
CDK12-208ENST00000584336 GOLGA3Q08378 1498 aa16.71■□□□□ 0.27
CDK12-208ENST00000584336 KIF21BO75037 1637 aa16.69■□□□□ 0.26
CDK12-208ENST00000584336 TNIKQ9UKE5 1360 aa16.68■□□□□ 0.26
CDK12-208ENST00000584336 IGF1RP08069 1367 aa16.65■□□□□ 0.26
CDK12-208ENST00000584336 CEP162Q5TB80 1403 aa16.65■□□□□ 0.26
CDK12-208ENST00000584336 PRXQ9BXM0 1461 aa16.65■□□□□ 0.26
CDK12-208ENST00000584336 RANGAP1P46060 587 aaPredicted RBP16.64■□□□□ 0.25
CDK12-208ENST00000584336 ABCA10Q8WWZ4 1543 aa16.61■□□□□ 0.25
CDK12-208ENST00000584336 TDRD9Q8NDG6 1382 aaKnown RBP16.59■□□□□ 0.25
CDK12-208ENST00000584336 PPARGC1BQ86YN6 1023 aaKnown RBP16.58■□□□□ 0.25
CDK12-208ENST00000584336 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
CDK12-208ENST00000584336 CARMIL1Q5VZK9 1371 aa16.54■□□□□ 0.24
CDK12-208ENST00000584336 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
CDK12-208ENST00000584336 TARBP1Q13395 1621 aaKnown RBP16.53■□□□□ 0.24
CDK12-208ENST00000584336 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
CDK12-208ENST00000584336 IFT140Q96RY7 1462 aa16.51■□□□□ 0.23
CDK12-208ENST00000584336 CLIP1P30622 1438 aa16.49■□□□□ 0.23
CDK12-208ENST00000584336 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
CDK12-208ENST00000584336 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
CDK12-208ENST00000584336 GAPVD1Q14C86 1478 aa16.47■□□□□ 0.23
CDK12-208ENST00000584336 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
CDK12-208ENST00000584336 TTBK1Q5TCY1 1321 aaPredicted RBP16.43■□□□□ 0.22
CDK12-208ENST00000584336 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
CDK12-208ENST00000584336 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
CDK12-208ENST00000584336 CUL7Q14999 1698 aa16.37■□□□□ 0.21
CDK12-208ENST00000584336 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
CDK12-208ENST00000584336 PBRM1Q86U86 1689 aa16.36■□□□□ 0.21
CDK12-208ENST00000584336 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
CDK12-208ENST00000584336 ARHGAP35Q9NRY4 1499 aa16.34■□□□□ 0.21
CDK12-208ENST00000584336 VPS8Q8N3P4 1428 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms