RNA–Protein interactions for RNA: ENST00000464368.1

TFRC-209, Transcript of transferrin receptor, humanhuman

TSL 4

Gene TFRC, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-209ENST00000464368 NISCHQ9Y2I1 1504 aa24.88■■□□□ 1.57
TFRC-209ENST00000464368 ABCC9O60706 1549 aa22.62■■□□□ 1.21
TFRC-209ENST00000464368 CCDC180Q9P1Z9 1646 aa22.35■■□□□ 1.17
TFRC-209ENST00000464368 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.01
TFRC-209ENST00000464368 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
TFRC-209ENST00000464368 NACADO15069 1562 aa21.19■□□□□ 0.98
TFRC-209ENST00000464368 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
TFRC-209ENST00000464368 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
TFRC-209ENST00000464368 UNC13AQ9UPW8 1703 aa20.88■□□□□ 0.93
TFRC-209ENST00000464368 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
TFRC-209ENST00000464368 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
TFRC-209ENST00000464368 ZCCHC6Q5VYS8 1495 aaKnown RBP20.6■□□□□ 0.89
TFRC-209ENST00000464368 DCAF1Q9Y4B6 1507 aa20.5■□□□□ 0.87
TFRC-209ENST00000464368 SHROOM4Q9ULL8 1493 aa20.45■□□□□ 0.86
TFRC-209ENST00000464368 SCRIBQ14160 1630 aa20.45■□□□□ 0.86
TFRC-209ENST00000464368 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
TFRC-209ENST00000464368 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
TFRC-209ENST00000464368 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
TFRC-209ENST00000464368 DNAJC5Q9H3Z4 198 aa19.69■□□□□ 0.74
TFRC-209ENST00000464368 NCAPD3P42695 1498 aa19.58■□□□□ 0.72
TFRC-209ENST00000464368 ERCC6Q03468 1493 aa19.53■□□□□ 0.72
TFRC-209ENST00000464368 ATAD2BQ9ULI0 1458 aa19.52■□□□□ 0.72
TFRC-209ENST00000464368 CUX2O14529 1486 aa19.5■□□□□ 0.71
TFRC-209ENST00000464368 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
TFRC-209ENST00000464368 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
TFRC-209ENST00000464368 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
TFRC-209ENST00000464368 NESP48681 1621 aa19.39■□□□□ 0.69
TFRC-209ENST00000464368 BAZ1BQ9UIG0 1483 aaKnown RBP19.33■□□□□ 0.68
TFRC-209ENST00000464368 BAZ1AQ9NRL2 1556 aaPredicted RBP19.32■□□□□ 0.68
TFRC-209ENST00000464368 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
TFRC-209ENST00000464368 MROH2BQ7Z745 1585 aa19.2■□□□□ 0.66
TFRC-209ENST00000464368 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
TFRC-209ENST00000464368 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
TFRC-209ENST00000464368 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.64
TFRC-209ENST00000464368 PDS5BQ9NTI5 1447 aa19.06■□□□□ 0.64
TFRC-209ENST00000464368 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
TFRC-209ENST00000464368 WIZO95785 1651 aa18.95■□□□□ 0.62
TFRC-209ENST00000464368 MRC2Q9UBG0 1479 aa18.93■□□□□ 0.62
TFRC-209ENST00000464368 WDR62O43379 1518 aa18.88■□□□□ 0.61
TFRC-209ENST00000464368 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
TFRC-209ENST00000464368 CEP164Q9UPV0 1460 aa18.82■□□□□ 0.6
TFRC-209ENST00000464368 FANCD2Q9BXW9 1451 aa18.79■□□□□ 0.6
TFRC-209ENST00000464368 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
TFRC-209ENST00000464368 CFTRP13569 1480 aa18.73■□□□□ 0.59
TFRC-209ENST00000464368 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
TFRC-209ENST00000464368 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
TFRC-209ENST00000464368 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
TFRC-209ENST00000464368 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
TFRC-209ENST00000464368 CCDC88BA6NC98 1476 aa18.49■□□□□ 0.55
TFRC-209ENST00000464368 ZNF608Q9ULD9 1512 aaPredicted RBP18.48■□□□□ 0.55
TFRC-209ENST00000464368 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
TFRC-209ENST00000464368 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
TFRC-209ENST00000464368 TOPBP1Q92547 1522 aa18.42■□□□□ 0.54
TFRC-209ENST00000464368 RIMBP3CA6NJZ7 1639 aa18.38■□□□□ 0.53
TFRC-209ENST00000464368 RIMBP3BA6NNM3 1639 aa18.38■□□□□ 0.53
TFRC-209ENST00000464368 RIMBP3Q9UFD9 1639 aa18.38■□□□□ 0.53
TFRC-209ENST00000464368 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
TFRC-209ENST00000464368 ARHGEF11O15085 1522 aa18.33■□□□□ 0.52
TFRC-209ENST00000464368 DNMBPQ6XZF7 1577 aa18.32■□□□□ 0.52
TFRC-209ENST00000464368 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
TFRC-209ENST00000464368 AQRO60306 1485 aaKnown RBP eCLIP18.27■□□□□ 0.522e-18■■■□□ 16.4
TFRC-209ENST00000464368 TARBP1Q13395 1621 aaKnown RBP18.25■□□□□ 0.51
TFRC-209ENST00000464368 POLA1P09884 1462 aaPredicted RBP18.22■□□□□ 0.51
TFRC-209ENST00000464368 CHD1O14646 1710 aa18.21■□□□□ 0.51
TFRC-209ENST00000464368 FBLN2P98095 1184 aa18.2■□□□□ 0.5
TFRC-209ENST00000464368 CYB5RLQ6IPT4 315 aa18.2■□□□□ 0.5
TFRC-209ENST00000464368 RAD54L2Q9Y4B4 1467 aa18.18■□□□□ 0.5
TFRC-209ENST00000464368 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
TFRC-209ENST00000464368 ARAP1Q96P48 1450 aa18.14■□□□□ 0.5
TFRC-209ENST00000464368 SOGA1O94964 1423 aa18.12■□□□□ 0.49
TFRC-209ENST00000464368 FGD5Q6ZNL6 1462 aa18.09■□□□□ 0.49
TFRC-209ENST00000464368 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.49
TFRC-209ENST00000464368 CUX1P39880 1505 aa18.05■□□□□ 0.48
TFRC-209ENST00000464368 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
TFRC-209ENST00000464368 CLASP1Q7Z460 1538 aa18.01■□□□□ 0.47
TFRC-209ENST00000464368 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
TFRC-209ENST00000464368 WDR97A6NE52 1622 aa18■□□□□ 0.47
TFRC-209ENST00000464368 MAGI1Q96QZ7 1491 aaPredicted RBP17.99■□□□□ 0.47
TFRC-209ENST00000464368 GRIN2BQ13224 1484 aa17.98■□□□□ 0.47
TFRC-209ENST00000464368 SYNJ1O43426 1573 aa17.97■□□□□ 0.47
TFRC-209ENST00000464368 SYNJ2O15056 1496 aa17.94■□□□□ 0.46
TFRC-209ENST00000464368 GAPVD1Q14C86 1478 aa17.89■□□□□ 0.45
TFRC-209ENST00000464368 PBRM1Q86U86 1689 aa17.88■□□□□ 0.45
TFRC-209ENST00000464368 ABCA10Q8WWZ4 1543 aa17.85■□□□□ 0.45
TFRC-209ENST00000464368 ABCA5Q8WWZ7 1642 aa17.84■□□□□ 0.45
TFRC-209ENST00000464368 SUPT5HO00267 1087 aaKnown RBP17.82■□□□□ 0.44
TFRC-209ENST00000464368 GRIN2AQ12879 1464 aa17.76■□□□□ 0.43
TFRC-209ENST00000464368 ERCC6L2Q5T890 1561 aa17.76■□□□□ 0.43
TFRC-209ENST00000464368 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
TFRC-209ENST00000464368 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
TFRC-209ENST00000464368 CHIC1Q5VXU3 224 aa17.72■□□□□ 0.43
TFRC-209ENST00000464368 CEP170Q5SW79 1584 aa17.71■□□□□ 0.43
TFRC-209ENST00000464368 NUP160Q12769 1436 aa17.7■□□□□ 0.42
TFRC-209ENST00000464368 TOP2BQ02880 1626 aa17.68■□□□□ 0.42
TFRC-209ENST00000464368 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
TFRC-209ENST00000464368 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
TFRC-209ENST00000464368 SHROOM2Q13796 1616 aa17.62■□□□□ 0.41
TFRC-209ENST00000464368 ERICH3Q5RHP9 1530 aa17.61■□□□□ 0.41
TFRC-209ENST00000464368 PRG4Q92954 1404 aaPredicted RBP17.56■□□□□ 0.4
TFRC-209ENST00000464368 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms