RNA–Protein interactions for RNA: ENST00000467301.1

LIMK2-208, Transcript of LIM domain kinase 2, humanhuman

TSL 3

Gene LIMK2, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-208ENST00000467301 NISCHQ9Y2I1 1504 aa33.72■■■□□ 2.99
LIMK2-208ENST00000467301 CCDC180Q9P1Z9 1646 aa30.22■■■□□ 2.43
LIMK2-208ENST00000467301 ABCC9O60706 1549 aa30.06■■■□□ 2.4
LIMK2-208ENST00000467301 RB1CC1Q8TDY2 1594 aa28.67■■■□□ 2.18
LIMK2-208ENST00000467301 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
LIMK2-208ENST00000467301 NACADO15069 1562 aa28.49■■■□□ 2.15
LIMK2-208ENST00000467301 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
LIMK2-208ENST00000467301 MYO15BQ96JP2 1530 aa28.07■■■□□ 2.08
LIMK2-208ENST00000467301 PABPN1Q86U42 306 aaKnown RBP eCLIP28.01■■■□□ 2.07
LIMK2-208ENST00000467301 ZCCHC6Q5VYS8 1495 aaKnown RBP27.99■■■□□ 2.07
LIMK2-208ENST00000467301 DNAJC5BQ9UF47 199 aa27.92■■■□□ 2.06
LIMK2-208ENST00000467301 DCAF1Q9Y4B6 1507 aa27.81■■■□□ 2.04
LIMK2-208ENST00000467301 BICRAQ9NZM4 1560 aa27.79■■■□□ 2.04
LIMK2-208ENST00000467301 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
LIMK2-208ENST00000467301 SHROOM4Q9ULL8 1493 aa27.39■■□□□ 1.98
LIMK2-208ENST00000467301 CC2D2AQ9P2K1 1620 aa27.16■■□□□ 1.94
LIMK2-208ENST00000467301 EIF4G1Q04637 1599 aaKnown RBP27.13■■□□□ 1.93
LIMK2-208ENST00000467301 CECR2Q9BXF3 1484 aa27.03■■□□□ 1.92
LIMK2-208ENST00000467301 SMARCA4P51532 1647 aa26.31■■□□□ 1.8
LIMK2-208ENST00000467301 NCAPD3P42695 1498 aa26.23■■□□□ 1.79
LIMK2-208ENST00000467301 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
LIMK2-208ENST00000467301 SMARCA2P51531 1590 aa26.2■■□□□ 1.79
LIMK2-208ENST00000467301 BAZ1AQ9NRL2 1556 aaPredicted RBP26.19■■□□□ 1.78
LIMK2-208ENST00000467301 HMGXB3Q12766 1538 aa26.12■■□□□ 1.77
LIMK2-208ENST00000467301 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
LIMK2-208ENST00000467301 MROH2BQ7Z745 1585 aa26.01■■□□□ 1.75
LIMK2-208ENST00000467301 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
LIMK2-208ENST00000467301 PEG3Q9GZU2 1588 aa25.97■■□□□ 1.75
LIMK2-208ENST00000467301 NESP48681 1621 aa25.86■■□□□ 1.73
LIMK2-208ENST00000467301 CUX2O14529 1486 aa25.77■■□□□ 1.72
LIMK2-208ENST00000467301 WIZO95785 1651 aa25.76■■□□□ 1.71
LIMK2-208ENST00000467301 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
LIMK2-208ENST00000467301 KIF21AQ7Z4S6 1674 aa25.6■■□□□ 1.69
LIMK2-208ENST00000467301 THOC2Q8NI27 1593 aaKnown RBP25.56■■□□□ 1.68
LIMK2-208ENST00000467301 PDS5BQ9NTI5 1447 aa25.53■■□□□ 1.68
LIMK2-208ENST00000467301 RSF1Q96T23 1441 aaPredicted RBP25.5■■□□□ 1.67
LIMK2-208ENST00000467301 CADPSQ9ULU8 1353 aa25.48■■□□□ 1.67
LIMK2-208ENST00000467301 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
LIMK2-208ENST00000467301 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
LIMK2-208ENST00000467301 MRC2Q9UBG0 1479 aa25.32■■□□□ 1.64
LIMK2-208ENST00000467301 CEP164Q9UPV0 1460 aa25.28■■□□□ 1.64
LIMK2-208ENST00000467301 WDR62O43379 1518 aa25.24■■□□□ 1.63
LIMK2-208ENST00000467301 FANCD2Q9BXW9 1451 aa25.24■■□□□ 1.63
LIMK2-208ENST00000467301 CFTRP13569 1480 aa25.23■■□□□ 1.63
LIMK2-208ENST00000467301 PRDM2Q13029 1718 aa25.13■■□□□ 1.61
LIMK2-208ENST00000467301 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
LIMK2-208ENST00000467301 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
LIMK2-208ENST00000467301 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
LIMK2-208ENST00000467301 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
LIMK2-208ENST00000467301 IFT140Q96RY7 1462 aa24.73■■□□□ 1.55
LIMK2-208ENST00000467301 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
LIMK2-208ENST00000467301 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
LIMK2-208ENST00000467301 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
LIMK2-208ENST00000467301 OSCARQ8IYS5 282 aa24.61■■□□□ 1.53
LIMK2-208ENST00000467301 TRIM41Q8WV44 630 aa24.61■■□□□ 1.53
LIMK2-208ENST00000467301 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
LIMK2-208ENST00000467301 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
LIMK2-208ENST00000467301 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
LIMK2-208ENST00000467301 AQRO60306 1485 aaKnown RBP eCLIP24.49■■□□□ 1.514e-8■■■■■ 31.9
LIMK2-208ENST00000467301 RAD54L2Q9Y4B4 1467 aa24.47■■□□□ 1.51
LIMK2-208ENST00000467301 CUX1P39880 1505 aa24.44■■□□□ 1.5
LIMK2-208ENST00000467301 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
LIMK2-208ENST00000467301 CHD1O14646 1710 aa24.43■■□□□ 1.5
LIMK2-208ENST00000467301 SOGA1O94964 1423 aa24.43■■□□□ 1.5
LIMK2-208ENST00000467301 FBLN2P98095 1184 aa24.36■■□□□ 1.49
LIMK2-208ENST00000467301 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
LIMK2-208ENST00000467301 RIMBP3CA6NJZ7 1639 aa24.35■■□□□ 1.49
LIMK2-208ENST00000467301 RIMBP3BA6NNM3 1639 aa24.35■■□□□ 1.49
LIMK2-208ENST00000467301 RIMBP3Q9UFD9 1639 aa24.35■■□□□ 1.49
LIMK2-208ENST00000467301 WDR97A6NE52 1622 aa24.29■■□□□ 1.48
LIMK2-208ENST00000467301 SNAPC4Q5SXM2 1469 aa24.27■■□□□ 1.48
LIMK2-208ENST00000467301 ARHGEF11O15085 1522 aa24.26■■□□□ 1.47
LIMK2-208ENST00000467301 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
LIMK2-208ENST00000467301 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
LIMK2-208ENST00000467301 MAGI1Q96QZ7 1491 aaPredicted RBP24.18■■□□□ 1.46
LIMK2-208ENST00000467301 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
LIMK2-208ENST00000467301 CHMP7Q8WUX9 453 aaPredicted RBP24.15■■□□□ 1.46
LIMK2-208ENST00000467301 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
LIMK2-208ENST00000467301 ABCA5Q8WWZ7 1642 aa24.12■■□□□ 1.45
LIMK2-208ENST00000467301 BIVM-ERCC5R4GMW8 1640 aa24.11■■□□□ 1.45
LIMK2-208ENST00000467301 SYNJ1O43426 1573 aa24.11■■□□□ 1.45
LIMK2-208ENST00000467301 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
LIMK2-208ENST00000467301 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
LIMK2-208ENST00000467301 SYNJ2O15056 1496 aa24.09■■□□□ 1.45
LIMK2-208ENST00000467301 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
LIMK2-208ENST00000467301 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
LIMK2-208ENST00000467301 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
LIMK2-208ENST00000467301 ADAMTS12P58397 1594 aa23.95■■□□□ 1.42
LIMK2-208ENST00000467301 GRIN2AQ12879 1464 aa23.89■■□□□ 1.42
LIMK2-208ENST00000467301 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
LIMK2-208ENST00000467301 FHAD1B1AJZ9 1412 aa23.83■■□□□ 1.4
LIMK2-208ENST00000467301 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
LIMK2-208ENST00000467301 TRHP20396 242 aaPredicted RBP23.81■■□□□ 1.4
LIMK2-208ENST00000467301 NUP160Q12769 1436 aa23.76■■□□□ 1.39
LIMK2-208ENST00000467301 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
LIMK2-208ENST00000467301 SHROOM2Q13796 1616 aa23.67■■□□□ 1.38
LIMK2-208ENST00000467301 KIF27Q86VH2 1401 aa23.63■■□□□ 1.37
LIMK2-208ENST00000467301 RUSC2Q8N2Y8 1516 aa23.6■■□□□ 1.37
LIMK2-208ENST00000467301 CUL7Q14999 1698 aa23.59■■□□□ 1.37
LIMK2-208ENST00000467301 PRG4Q92954 1404 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms