Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CLCNKAP51800 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CLCNKAP51800 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.36■■□□□ 1.17
CLCNKAP51800 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.36■■□□□ 1.17
CLCNKAP51800 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CLCNKAP51800 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CLCNKAP51800 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CLCNKAP51800 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CLCNKAP51800 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CLCNKAP51800 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCNKAP51800 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
CLCNKAP51800 AL136116.3-201ENST00000402907 1138 ntBASIC22.35■■□□□ 1.17
CLCNKAP51800 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCNKAP51800 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.35■■□□□ 1.17
CLCNKAP51800 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CLCNKAP51800 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCNKAP51800 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCNKAP51800 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CLCNKAP51800 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCNKAP51800 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCNKAP51800 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CLCNKAP51800 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CLCNKAP51800 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCNKAP51800 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CLCNKAP51800 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCNKAP51800 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CLCNKAP51800 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.34■■□□□ 1.17
CLCNKAP51800 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.34■■□□□ 1.17
CLCNKAP51800 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.34■■□□□ 1.17
CLCNKAP51800 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCNKAP51800 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CLCNKAP51800 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLCNKAP51800 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLCNKAP51800 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CLCNKAP51800 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.33■■□□□ 1.17
CLCNKAP51800 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.33■■□□□ 1.17
CLCNKAP51800 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CLCNKAP51800 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CLCNKAP51800 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CLCNKAP51800 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.33■■□□□ 1.16
CLCNKAP51800 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CLCNKAP51800 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.33■■□□□ 1.16
CLCNKAP51800 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CLCNKAP51800 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.32■■□□□ 1.16
CLCNKAP51800 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLCNKAP51800 LINC00543-201ENST00000567234 1845 ntBASIC22.32■■□□□ 1.16
CLCNKAP51800 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.32■■□□□ 1.16
CLCNKAP51800 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.32■■□□□ 1.16
CLCNKAP51800 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLCNKAP51800 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLCNKAP51800 ALDH1A3-203ENST00000557963 1670 ntBASIC22.31■■□□□ 1.16
CLCNKAP51800 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLCNKAP51800 AC141586.4-201ENST00000624558 1573 ntBASIC22.31■■□□□ 1.16
CLCNKAP51800 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.31■■□□□ 1.16
CLCNKAP51800 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CLCNKAP51800 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLCNKAP51800 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLCNKAP51800 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCNKAP51800 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.3■■□□□ 1.16
CLCNKAP51800 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CLCNKAP51800 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLCNKAP51800 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.3■■□□□ 1.16
CLCNKAP51800 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
CLCNKAP51800 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CLCNKAP51800 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCNKAP51800 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CLCNKAP51800 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCNKAP51800 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCNKAP51800 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.29■■□□□ 1.16
CLCNKAP51800 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCNKAP51800 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCNKAP51800 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLCNKAP51800 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CLCNKAP51800 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCNKAP51800 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CLCNKAP51800 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.28■■□□□ 1.16
CLCNKAP51800 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.28■■□□□ 1.16
CLCNKAP51800 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCNKAP51800 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCNKAP51800 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLCNKAP51800 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
CLCNKAP51800 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CLCNKAP51800 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.27■■□□□ 1.16
CLCNKAP51800 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CLCNKAP51800 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCNKAP51800 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.27■■□□□ 1.16
CLCNKAP51800 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.27■■□□□ 1.16
CLCNKAP51800 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLCNKAP51800 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.27■■□□□ 1.16
CLCNKAP51800 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
CLCNKAP51800 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.27■■□□□ 1.16
CLCNKAP51800 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.27■■□□□ 1.16
CLCNKAP51800 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLCNKAP51800 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLCNKAP51800 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.15
CLCNKAP51800 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLCNKAP51800 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.26■■□□□ 1.15
CLCNKAP51800 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.26■■□□□ 1.15
CLCNKAP51800 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.26■■□□□ 1.15
CLCNKAP51800 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms