RNA–Protein interactions for RNA: ENST00000588740.5

CCDC106-205, Transcript of coiled-coil domain containing 106, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC106, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC106-205ENST00000588740 NISCHQ9Y2I1 1504 aa53.83■■■■■ 6.21
CCDC106-205ENST00000588740 CCDC180Q9P1Z9 1646 aa47.6■■■■■ 5.21
CCDC106-205ENST00000588740 ABCC9O60706 1549 aa45.67■■■■■ 4.9
CCDC106-205ENST00000588740 ZCCHC6Q5VYS8 1495 aaKnown RBP45.04■■■■■ 4.8
CCDC106-205ENST00000588740 DCAF1Q9Y4B6 1507 aa44.64■■■■■ 4.74
CCDC106-205ENST00000588740 MYO15BQ96JP2 1530 aa44.56■■■■■ 4.72
CCDC106-205ENST00000588740 NACADO15069 1562 aa44.52■■■■■ 4.72
CCDC106-205ENST00000588740 DCAF8L2P0C7V8 631 aa44.44■■■■■ 4.7
CCDC106-205ENST00000588740 RB1CC1Q8TDY2 1594 aa44.36■■■■■ 4.69
CCDC106-205ENST00000588740 UNC13AQ9UPW8 1703 aa43.44■■■■■ 4.54
CCDC106-205ENST00000588740 SCRIBQ14160 1630 aa43.4■■■■■ 4.54
CCDC106-205ENST00000588740 BICRAQ9NZM4 1560 aa43■■■■■ 4.47
CCDC106-205ENST00000588740 SHROOM4Q9ULL8 1493 aa42.83■■■■■ 4.45
CCDC106-205ENST00000588740 PABPN1Q86U42 306 aaKnown RBP eCLIP42.74■■■■■ 4.43
CCDC106-205ENST00000588740 CECR2Q9BXF3 1484 aa41.8■■■■■ 4.28
CCDC106-205ENST00000588740 EIF4G1Q04637 1599 aaKnown RBP41.79■■■■■ 4.28
CCDC106-205ENST00000588740 BAZ1AQ9NRL2 1556 aaPredicted RBP41.68■■■■■ 4.26
CCDC106-205ENST00000588740 SMARCA4P51532 1647 aa41.63■■■■■ 4.25
CCDC106-205ENST00000588740 MROH2BQ7Z745 1585 aa41.47■■■■■ 4.23
CCDC106-205ENST00000588740 CC2D2AQ9P2K1 1620 aa41.42■■■■■ 4.22
CCDC106-205ENST00000588740 RSF1Q96T23 1441 aaPredicted RBP41.28■■■■■ 4.2
CCDC106-205ENST00000588740 PEG3Q9GZU2 1588 aa41.26■■■■■ 4.2
CCDC106-205ENST00000588740 SMARCA2P51531 1590 aa41.19■■■■■ 4.18
CCDC106-205ENST00000588740 DNAJC5BQ9UF47 199 aa41.17■■■■■ 4.18
CCDC106-205ENST00000588740 ATAD2BQ9ULI0 1458 aa41.16■■■■■ 4.18
CCDC106-205ENST00000588740 WIZO95785 1651 aa41.08■■■■■ 4.17
CCDC106-205ENST00000588740 NCAPD3P42695 1498 aa41.04■■■■■ 4.16
CCDC106-205ENST00000588740 HMGXB3Q12766 1538 aa40.96■■■■■ 4.15
CCDC106-205ENST00000588740 BAZ1BQ9UIG0 1483 aaKnown RBP40.87■■■■■ 4.13
CCDC106-205ENST00000588740 TOP2AP11388 1531 aaKnown RBP40.72■■■■■ 4.11
CCDC106-205ENST00000588740 SUPT5HO00267 1087 aaKnown RBP40.67■■■■■ 4.1
CCDC106-205ENST00000588740 CCDC88BA6NC98 1476 aa40.18■■■■■ 4.02
CCDC106-205ENST00000588740 LAMC3Q9Y6N6 1575 aa39.87■■■■□ 3.97
CCDC106-205ENST00000588740 CADPSQ9ULU8 1353 aa39.85■■■■□ 3.97
CCDC106-205ENST00000588740 CFTRP13569 1480 aa39.82■■■■□ 3.96
CCDC106-205ENST00000588740 NESP48681 1621 aa39.76■■■■□ 3.96
CCDC106-205ENST00000588740 PRDM2Q13029 1718 aa39.69■■■■□ 3.94
CCDC106-205ENST00000588740 PDS5BQ9NTI5 1447 aa39.52■■■■□ 3.92
CCDC106-205ENST00000588740 KIF21AQ7Z4S6 1674 aa39.41■■■■□ 3.9
CCDC106-205ENST00000588740 FANCD2Q9BXW9 1451 aa39.4■■■■□ 3.9
CCDC106-205ENST00000588740 ERCC6Q03468 1493 aa39.31■■■■□ 3.88
CCDC106-205ENST00000588740 CEP164Q9UPV0 1460 aa39.29■■■■□ 3.88
CCDC106-205ENST00000588740 THOC2Q8NI27 1593 aaKnown RBP39.09■■■■□ 3.85
CCDC106-205ENST00000588740 MRC2Q9UBG0 1479 aa39.08■■■■□ 3.85
CCDC106-205ENST00000588740 URB2Q14146 1524 aaKnown RBP38.97■■■■□ 3.83
CCDC106-205ENST00000588740 WDR62O43379 1518 aa38.97■■■■□ 3.83
CCDC106-205ENST00000588740 ABCC8Q09428 1581 aa38.95■■■■□ 3.83
CCDC106-205ENST00000588740 DNMBPQ6XZF7 1577 aa38.93■■■■□ 3.82
CCDC106-205ENST00000588740 WRNQ14191 1432 aaPredicted RBP eCLIP38.89■■■■□ 3.82
CCDC106-205ENST00000588740 TOPBP1Q92547 1522 aa38.88■■■■□ 3.81
CCDC106-205ENST00000588740 CUX1P39880 1505 aa38.87■■■■□ 3.81
CCDC106-205ENST00000588740 BIVM-ERCC5R4GMW8 1640 aa38.8■■■■□ 3.8
CCDC106-205ENST00000588740 SYNJ1O43426 1573 aa38.79■■■■□ 3.8
CCDC106-205ENST00000588740 TOP2BQ02880 1626 aa38.79■■■■□ 3.8
CCDC106-205ENST00000588740 CUX2O14529 1486 aa38.69■■■■□ 3.78
CCDC106-205ENST00000588740 FGD5Q6ZNL6 1462 aa38.61■■■■□ 3.77
CCDC106-205ENST00000588740 POLA1P09884 1462 aaPredicted RBP38.6■■■■□ 3.77
CCDC106-205ENST00000588740 CHIC1Q5VXU3 224 aa38.47■■■■□ 3.75
CCDC106-205ENST00000588740 IFT140Q96RY7 1462 aa38.45■■■■□ 3.75
CCDC106-205ENST00000588740 TARBP1Q13395 1621 aaKnown RBP38.43■■■■□ 3.74
CCDC106-205ENST00000588740 TRIM41Q8WV44 630 aa38.42■■■■□ 3.74
CCDC106-205ENST00000588740 SOGA1O94964 1423 aa38.4■■■■□ 3.74
CCDC106-205ENST00000588740 RAD54L2Q9Y4B4 1467 aa38.38■■■■□ 3.73
CCDC106-205ENST00000588740 WDR97A6NE52 1622 aa38.35■■■■□ 3.73
CCDC106-205ENST00000588740 ABCA10Q8WWZ4 1543 aa38.31■■■■□ 3.72
CCDC106-205ENST00000588740 ZNF608Q9ULD9 1512 aaPredicted RBP38.17■■■■□ 3.7
CCDC106-205ENST00000588740 EIF4G3O43432 1585 aaKnown RBP38.12■■■■□ 3.69
CCDC106-205ENST00000588740 ABCA5Q8WWZ7 1642 aa38.12■■■■□ 3.69
CCDC106-205ENST00000588740 TDRD9Q8NDG6 1382 aaKnown RBP38.07■■■■□ 3.68
CCDC106-205ENST00000588740 AQRO60306 1485 aaKnown RBP eCLIP38.03■■■■□ 3.68
CCDC106-205ENST00000588740 KIF27Q86VH2 1401 aa38.02■■■■□ 3.68
CCDC106-205ENST00000588740 GAPVD1Q14C86 1478 aa38.01■■■■□ 3.68
CCDC106-205ENST00000588740 PBRM1Q86U86 1689 aa37.96■■■■□ 3.67
CCDC106-205ENST00000588740 GRIN2BQ13224 1484 aa37.91■■■■□ 3.66
CCDC106-205ENST00000588740 ERICH3Q5RHP9 1530 aa37.87■■■■□ 3.65
CCDC106-205ENST00000588740 RUSC2Q8N2Y8 1516 aa37.87■■■■□ 3.65
CCDC106-205ENST00000588740 EEA1Q15075 1411 aa37.85■■■■□ 3.65
CCDC106-205ENST00000588740 MAGI1Q96QZ7 1491 aaPredicted RBP37.76■■■■□ 3.64
CCDC106-205ENST00000588740 IGF1RP08069 1367 aa37.74■■■■□ 3.63
CCDC106-205ENST00000588740 SNAPC4Q5SXM2 1469 aa37.74■■■■□ 3.63
CCDC106-205ENST00000588740 CUL7Q14999 1698 aa37.71■■■■□ 3.63
CCDC106-205ENST00000588740 ADAMTS12P58397 1594 aa37.68■■■■□ 3.62
CCDC106-205ENST00000588740 FHAD1B1AJZ9 1412 aa37.6■■■■□ 3.61
CCDC106-205ENST00000588740 CSRNP3Q8WYN3 585 aa37.59■■■■□ 3.61
CCDC106-205ENST00000588740 SYNJ2O15056 1496 aa37.58■■■■□ 3.61
CCDC106-205ENST00000588740 FAM9AQ8IZU1 332 aaPredicted RBP37.54■■■■□ 3.6
CCDC106-205ENST00000588740 CARMIL1Q5VZK9 1371 aa37.53■■■■□ 3.6
CCDC106-205ENST00000588740 PRXQ9BXM0 1461 aa37.52■■■■□ 3.6
CCDC106-205ENST00000588740 CHD1O14646 1710 aa37.5■■■■□ 3.59
CCDC106-205ENST00000588740 GRIN2AQ12879 1464 aa37.43■■■■□ 3.58
CCDC106-205ENST00000588740 RAPGEF2Q9Y4G8 1499 aa37.43■■■■□ 3.58
CCDC106-205ENST00000588740 KIF21BO75037 1637 aa37.42■■■■□ 3.58
CCDC106-205ENST00000588740 CHMP7Q8WUX9 453 aaPredicted RBP37.41■■■■□ 3.58
CCDC106-205ENST00000588740 FBLN2P98095 1184 aa37.33■■■■□ 3.57
CCDC106-205ENST00000588740 NUP160Q12769 1436 aa37.25■■■■□ 3.55
CCDC106-205ENST00000588740 CEP170Q5SW79 1584 aa37.22■■■■□ 3.55
CCDC106-205ENST00000588740 GOLGA3Q08378 1498 aa37.21■■■■□ 3.55
CCDC106-205ENST00000588740 OSCARQ8IYS5 282 aa37.13■■■■□ 3.53
CCDC106-205ENST00000588740 CTTNBP2Q8WZ74 1663 aa37.13■■■■□ 3.53
CCDC106-205ENST00000588740 CLASP1Q7Z460 1538 aa37.1■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms