Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LTAP01374 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LTAP01374 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LTAP01374 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LTAP01374 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LTAP01374 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LTAP01374 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.17■□□□□ 0.34
LTAP01374 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LTAP01374 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LTAP01374 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LTAP01374 RPS2P35-201ENST00000443417 897 ntBASIC17.17■□□□□ 0.34
LTAP01374 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LTAP01374 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LTAP01374 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LTAP01374 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LTAP01374 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LTAP01374 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LTAP01374 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LTAP01374 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.16■□□□□ 0.34
LTAP01374 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.16■□□□□ 0.34
LTAP01374 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LTAP01374 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LTAP01374 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LTAP01374 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LTAP01374 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LTAP01374 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.16■□□□□ 0.34
LTAP01374 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LTAP01374 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LTAP01374 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LTAP01374 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.16■□□□□ 0.34
LTAP01374 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LTAP01374 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.15■□□□□ 0.34
LTAP01374 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LTAP01374 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.15■□□□□ 0.34
LTAP01374 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LTAP01374 ECEL1P2-201ENST00000461596 1295 ntBASIC17.15■□□□□ 0.34
LTAP01374 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.15■□□□□ 0.34
LTAP01374 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LTAP01374 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LTAP01374 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LTAP01374 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LTAP01374 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.15■□□□□ 0.34
LTAP01374 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
LTAP01374 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LTAP01374 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LTAP01374 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LTAP01374 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.14■□□□□ 0.33
LTAP01374 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.14■□□□□ 0.33
LTAP01374 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LTAP01374 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
LTAP01374 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.14■□□□□ 0.33
LTAP01374 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LTAP01374 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LTAP01374 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.14■□□□□ 0.33
LTAP01374 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.13■□□□□ 0.33
LTAP01374 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LTAP01374 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LTAP01374 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.13■□□□□ 0.33
LTAP01374 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
LTAP01374 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LTAP01374 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LTAP01374 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LTAP01374 AC242852.2-201ENST00000615738 1807 ntBASIC17.13■□□□□ 0.33
LTAP01374 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LTAP01374 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LTAP01374 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LTAP01374 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LTAP01374 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.13■□□□□ 0.33
LTAP01374 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTAP01374 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTAP01374 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.12■□□□□ 0.33
LTAP01374 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTAP01374 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTAP01374 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LTAP01374 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTAP01374 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LTAP01374 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LTAP01374 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTAP01374 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.11■□□□□ 0.33
LTAP01374 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LTAP01374 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LTAP01374 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTAP01374 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTAP01374 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.11■□□□□ 0.33
LTAP01374 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTAP01374 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.11■□□□□ 0.33
LTAP01374 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTAP01374 AC090877.2-201ENST00000558441 1738 ntBASIC17.11■□□□□ 0.33
LTAP01374 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LTAP01374 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LTAP01374 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LTAP01374 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.11■□□□□ 0.33
LTAP01374 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
LTAP01374 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTAP01374 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LTAP01374 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.1■□□□□ 0.33
LTAP01374 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LTAP01374 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LTAP01374 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LTAP01374 AC016575.1-201ENST00000607026 382 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms