RNA–Protein interactions for RNA: ENST00000577454.5

MSL1-203, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2 BASIC

Gene MSL1, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-203ENST00000577454 NISCHQ9Y2I1 1504 aa47.92■■■■■ 5.26
MSL1-203ENST00000577454 CCDC180Q9P1Z9 1646 aa41.34■■■■■ 4.21
MSL1-203ENST00000577454 ZCCHC6Q5VYS8 1495 aaKnown RBP40.39■■■■■ 4.06
MSL1-203ENST00000577454 SHROOM4Q9ULL8 1493 aa39.81■■■■□ 3.96
MSL1-203ENST00000577454 DCAF8L2P0C7V8 631 aa39.55■■■■□ 3.92
MSL1-203ENST00000577454 DCAF1Q9Y4B6 1507 aa39.52■■■■□ 3.92
MSL1-203ENST00000577454 MYO15BQ96JP2 1530 aa38.75■■■■□ 3.79
MSL1-203ENST00000577454 ABCC9O60706 1549 aa38.66■■■■□ 3.78
MSL1-203ENST00000577454 SUPT5HO00267 1087 aaKnown RBP38.64■■■■□ 3.78
MSL1-203ENST00000577454 NACADO15069 1562 aa38.37■■■■□ 3.73
MSL1-203ENST00000577454 SCRIBQ14160 1630 aa38.29■■■■□ 3.72
MSL1-203ENST00000577454 RB1CC1Q8TDY2 1594 aa37.89■■■■□ 3.66
MSL1-203ENST00000577454 RSF1Q96T23 1441 aaPredicted RBP37.5■■■■□ 3.59
MSL1-203ENST00000577454 CHIC1Q5VXU3 224 aa37.3■■■■□ 3.56
MSL1-203ENST00000577454 CECR2Q9BXF3 1484 aa37.27■■■■□ 3.56
MSL1-203ENST00000577454 UNC13AQ9UPW8 1703 aa37.2■■■■□ 3.55
MSL1-203ENST00000577454 MROH2BQ7Z745 1585 aa37.11■■■■□ 3.53
MSL1-203ENST00000577454 BAZ1AQ9NRL2 1556 aaPredicted RBP36.91■■■■□ 3.5
MSL1-203ENST00000577454 WIZO95785 1651 aa36.85■■■■□ 3.49
MSL1-203ENST00000577454 BICRAQ9NZM4 1560 aa36.79■■■■□ 3.48
MSL1-203ENST00000577454 SMARCA4P51532 1647 aa36.68■■■■□ 3.46
MSL1-203ENST00000577454 PABPN1Q86U42 306 aaKnown RBP eCLIP36.67■■■■□ 3.46
MSL1-203ENST00000577454 TOP2AP11388 1531 aaKnown RBP36.41■■■■□ 3.42
MSL1-203ENST00000577454 TRIM41Q8WV44 630 aa36.21■■■■□ 3.39
MSL1-203ENST00000577454 PEG3Q9GZU2 1588 aa36.14■■■■□ 3.38
MSL1-203ENST00000577454 SMARCA2P51531 1590 aa36.12■■■■□ 3.37
MSL1-203ENST00000577454 CCDC88BA6NC98 1476 aa36.11■■■■□ 3.37
MSL1-203ENST00000577454 EIF4G1Q04637 1599 aaKnown RBP36.1■■■■□ 3.37
MSL1-203ENST00000577454 LOC105371045A0A1W2PR82 267 aa35.98■■■■□ 3.35
MSL1-203ENST00000577454 ATAD2BQ9ULI0 1458 aa35.92■■■■□ 3.34
MSL1-203ENST00000577454 BAZ1BQ9UIG0 1483 aaKnown RBP35.76■■■■□ 3.32
MSL1-203ENST00000577454 FAM9AQ8IZU1 332 aaPredicted RBP35.67■■■■□ 3.3
MSL1-203ENST00000577454 ABCC8Q09428 1581 aa35.64■■■■□ 3.3
MSL1-203ENST00000577454 NCAPD3P42695 1498 aa35.45■■■■□ 3.27
MSL1-203ENST00000577454 HMGXB3Q12766 1538 aa35.43■■■■□ 3.26
MSL1-203ENST00000577454 WRNQ14191 1432 aaPredicted RBP eCLIP35.27■■■■□ 3.24
MSL1-203ENST00000577454 EHMT2Q96KQ7 1210 aa35.23■■■■□ 3.23
MSL1-203ENST00000577454 SOGA1O94964 1423 aa35.13■■■■□ 3.21
MSL1-203ENST00000577454 SYNJ1O43426 1573 aa35.11■■■■□ 3.21
MSL1-203ENST00000577454 PCGF6Q9BYE7 350 aa35.1■■■■□ 3.21
MSL1-203ENST00000577454 EEA1Q15075 1411 aa35.06■■■■□ 3.2
MSL1-203ENST00000577454 RUSC2Q8N2Y8 1516 aa34.96■■■■□ 3.19
MSL1-203ENST00000577454 CC2D2AQ9P2K1 1620 aa34.93■■■■□ 3.18
MSL1-203ENST00000577454 CSRNP3Q8WYN3 585 aa34.9■■■■□ 3.18
MSL1-203ENST00000577454 CFTRP13569 1480 aa34.89■■■■□ 3.18
MSL1-203ENST00000577454 TOP2BQ02880 1626 aa34.85■■■■□ 3.17
MSL1-203ENST00000577454 TRIM26Q12899 539 aaPredicted RBP34.82■■■■□ 3.16
MSL1-203ENST00000577454 BIVM-ERCC5R4GMW8 1640 aa34.77■■■■□ 3.16
MSL1-203ENST00000577454 TNIKQ9UKE5 1360 aa34.7■■■■□ 3.15
MSL1-203ENST00000577454 GOLGA3Q08378 1498 aa34.67■■■■□ 3.14
MSL1-203ENST00000577454 PRDM2Q13029 1718 aa34.66■■■■□ 3.14
MSL1-203ENST00000577454 CUX1P39880 1505 aa34.64■■■■□ 3.14
MSL1-203ENST00000577454 CADPSQ9ULU8 1353 aa34.63■■■■□ 3.13
MSL1-203ENST00000577454 CEP162Q5TB80 1403 aa34.62■■■■□ 3.13
MSL1-203ENST00000577454 HRCP23327 699 aa34.61■■■■□ 3.13
MSL1-203ENST00000577454 KIF21BO75037 1637 aa34.59■■■■□ 3.13
MSL1-203ENST00000577454 CEP164Q9UPV0 1460 aa34.59■■■■□ 3.13
MSL1-203ENST00000577454 UBTFP17480 764 aaKnown RBP34.58■■■■□ 3.13
MSL1-203ENST00000577454 RAPGEF2Q9Y4G8 1499 aa34.36■■■■□ 3.09
MSL1-203ENST00000577454 PPARGC1BQ86YN6 1023 aaKnown RBP34.3■■■■□ 3.08
MSL1-203ENST00000577454 KIF27Q86VH2 1401 aa34.29■■■■□ 3.08
MSL1-203ENST00000577454 FANCD2Q9BXW9 1451 aa34.27■■■■□ 3.08
MSL1-203ENST00000577454 PRXQ9BXM0 1461 aa34.24■■■■□ 3.07
MSL1-203ENST00000577454 ERICH3Q5RHP9 1530 aa34.22■■■■□ 3.07
MSL1-203ENST00000577454 NESP48681 1621 aa34.18■■■■□ 3.06
MSL1-203ENST00000577454 CLIP1P30622 1438 aa34.18■■■■□ 3.06
MSL1-203ENST00000577454 FGD5Q6ZNL6 1462 aa34.15■■■■□ 3.06
MSL1-203ENST00000577454 LAMC3Q9Y6N6 1575 aa34.1■■■■□ 3.05
MSL1-203ENST00000577454 CUX2O14529 1486 aa34.08■■■■□ 3.05
MSL1-203ENST00000577454 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
MSL1-203ENST00000577454 DNAJC5BQ9UF47 199 aa34■■■■□ 3.03
MSL1-203ENST00000577454 TOPBP1Q92547 1522 aa33.97■■■■□ 3.03
MSL1-203ENST00000577454 VPS8Q8N3P4 1428 aa33.96■■■■□ 3.03
MSL1-203ENST00000577454 IGF1RP08069 1367 aa33.94■■■■□ 3.02
MSL1-203ENST00000577454 RANGAP1P46060 587 aaPredicted RBP33.91■■■■□ 3.02
MSL1-203ENST00000577454 TTBK1Q5TCY1 1321 aaPredicted RBP33.9■■■■□ 3.02
MSL1-203ENST00000577454 POLA1P09884 1462 aaPredicted RBP33.88■■■■□ 3.01
MSL1-203ENST00000577454 PDS5BQ9NTI5 1447 aa33.85■■■■□ 3.01
MSL1-203ENST00000577454 RAD54L2Q9Y4B4 1467 aa33.82■■■■□ 3.01
MSL1-203ENST00000577454 URB2Q14146 1524 aaKnown RBP33.81■■■■□ 3
MSL1-203ENST00000577454 ABCA10Q8WWZ4 1543 aa33.81■■■■□ 3
MSL1-203ENST00000577454 CARMIL1Q5VZK9 1371 aa33.78■■■■□ 3
MSL1-203ENST00000577454 ARAP1Q96P48 1450 aa33.75■■■□□ 2.99
MSL1-203ENST00000577454 ZEB1P37275 1124 aaPredicted RBP33.74■■■□□ 2.99
MSL1-203ENST00000577454 KIF21AQ7Z4S6 1674 aa33.69■■■□□ 2.98
MSL1-203ENST00000577454 APLP2Q06481 763 aa33.67■■■□□ 2.98
MSL1-203ENST00000577454 WDR97A6NE52 1622 aa33.61■■■□□ 2.97
MSL1-203ENST00000577454 ARHGAP35Q9NRY4 1499 aa33.61■■■□□ 2.97
MSL1-203ENST00000577454 CUL7Q14999 1698 aa33.53■■■□□ 2.96
MSL1-203ENST00000577454 ABCA5Q8WWZ7 1642 aa33.48■■■□□ 2.95
MSL1-203ENST00000577454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.45■■■□□ 2.95
MSL1-203ENST00000577454 TDRD9Q8NDG6 1382 aaKnown RBP33.45■■■□□ 2.94
MSL1-203ENST00000577454 GAPVD1Q14C86 1478 aa33.4■■■□□ 2.94
MSL1-203ENST00000577454 MRC2Q9UBG0 1479 aa33.38■■■□□ 2.93
MSL1-203ENST00000577454 TARBP1Q13395 1621 aaKnown RBP33.38■■■□□ 2.93
MSL1-203ENST00000577454 CCER1Q8TC90 406 aaPredicted RBP33.38■■■□□ 2.93
MSL1-203ENST00000577454 KANK4Q5T7N3 995 aaPredicted RBP33.3■■■□□ 2.92
MSL1-203ENST00000577454 CTTNBP2Q8WZ74 1663 aa33.28■■■□□ 2.92
MSL1-203ENST00000577454 EFCAB5A4FU69 1503 aa33.21■■■□□ 2.91
MSL1-203ENST00000577454 HNRNPUL2Q1KMD3 747 aaKnown RBP33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms