RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 NISCHQ9Y2I1 1504 aa47.96■■■■■ 5.27
NPAS1-202ENST00000449844 CCDC180Q9P1Z9 1646 aa41.72■■■■■ 4.27
NPAS1-202ENST00000449844 ZCCHC6Q5VYS8 1495 aaKnown RBP40.35■■■■■ 4.05
NPAS1-202ENST00000449844 DCAF1Q9Y4B6 1507 aa39.61■■■■□ 3.93
NPAS1-202ENST00000449844 DCAF8L2P0C7V8 631 aa39.58■■■■□ 3.93
NPAS1-202ENST00000449844 SHROOM4Q9ULL8 1493 aa39.41■■■■□ 3.9
NPAS1-202ENST00000449844 ABCC9O60706 1549 aa39.23■■■■□ 3.87
NPAS1-202ENST00000449844 MYO15BQ96JP2 1530 aa39.02■■■■□ 3.84
NPAS1-202ENST00000449844 NACADO15069 1562 aa38.76■■■■□ 3.8
NPAS1-202ENST00000449844 SCRIBQ14160 1630 aa38.46■■■■□ 3.75
NPAS1-202ENST00000449844 RB1CC1Q8TDY2 1594 aa38.39■■■■□ 3.74
NPAS1-202ENST00000449844 SUPT5HO00267 1087 aaKnown RBP38.02■■■■□ 3.68
NPAS1-202ENST00000449844 UNC13AQ9UPW8 1703 aa37.71■■■■□ 3.63
NPAS1-202ENST00000449844 RSF1Q96T23 1441 aaPredicted RBP37.3■■■■□ 3.56
NPAS1-202ENST00000449844 CECR2Q9BXF3 1484 aa37.26■■■■□ 3.56
NPAS1-202ENST00000449844 BICRAQ9NZM4 1560 aa37.22■■■■□ 3.55
NPAS1-202ENST00000449844 MROH2BQ7Z745 1585 aa37.09■■■■□ 3.53
NPAS1-202ENST00000449844 PABPN1Q86U42 306 aaKnown RBP eCLIP37.03■■■■□ 3.52
NPAS1-202ENST00000449844 BAZ1AQ9NRL2 1556 aaPredicted RBP37.02■■■■□ 3.52
NPAS1-202ENST00000449844 CHIC1Q5VXU3 224 aa36.87■■■■□ 3.49
NPAS1-202ENST00000449844 SMARCA4P51532 1647 aa36.85■■■■□ 3.49
NPAS1-202ENST00000449844 WIZO95785 1651 aa36.84■■■■□ 3.49
NPAS1-202ENST00000449844 TOP2AP11388 1531 aaKnown RBP36.43■■■■□ 3.42
NPAS1-202ENST00000449844 PEG3Q9GZU2 1588 aa36.33■■■■□ 3.41
NPAS1-202ENST00000449844 SMARCA2P51531 1590 aa36.14■■■■□ 3.38
NPAS1-202ENST00000449844 ATAD2BQ9ULI0 1458 aa36.13■■■■□ 3.37
NPAS1-202ENST00000449844 EIF4G1Q04637 1599 aaKnown RBP36.09■■■■□ 3.37
NPAS1-202ENST00000449844 CCDC88BA6NC98 1476 aa36.05■■■■□ 3.36
NPAS1-202ENST00000449844 BAZ1BQ9UIG0 1483 aaKnown RBP35.98■■■■□ 3.35
NPAS1-202ENST00000449844 HMGXB3Q12766 1538 aa35.76■■■■□ 3.31
NPAS1-202ENST00000449844 NCAPD3P42695 1498 aa35.74■■■■□ 3.31
NPAS1-202ENST00000449844 TRIM41Q8WV44 630 aa35.7■■■■□ 3.31
NPAS1-202ENST00000449844 LOC105371045A0A1W2PR82 267 aa35.52■■■■□ 3.28
NPAS1-202ENST00000449844 CC2D2AQ9P2K1 1620 aa35.51■■■■□ 3.28
NPAS1-202ENST00000449844 ABCC8Q09428 1581 aa35.43■■■■□ 3.26
NPAS1-202ENST00000449844 WRNQ14191 1432 aaPredicted RBP eCLIP35.13■■■■□ 3.21
NPAS1-202ENST00000449844 FAM9AQ8IZU1 332 aaPredicted RBP35.1■■■■□ 3.21
NPAS1-202ENST00000449844 CFTRP13569 1480 aa35.04■■■■□ 3.2
NPAS1-202ENST00000449844 SYNJ1O43426 1573 aa35■■■■□ 3.19
NPAS1-202ENST00000449844 PRDM2Q13029 1718 aa34.99■■■■□ 3.19
NPAS1-202ENST00000449844 PCGF6Q9BYE7 350 aa34.91■■■■□ 3.18
NPAS1-202ENST00000449844 CADPSQ9ULU8 1353 aa34.87■■■■□ 3.17
NPAS1-202ENST00000449844 TOP2BQ02880 1626 aa34.82■■■■□ 3.17
NPAS1-202ENST00000449844 BIVM-ERCC5R4GMW8 1640 aa34.79■■■■□ 3.16
NPAS1-202ENST00000449844 SOGA1O94964 1423 aa34.78■■■■□ 3.16
NPAS1-202ENST00000449844 EEA1Q15075 1411 aa34.75■■■■□ 3.15
NPAS1-202ENST00000449844 HRCP23327 699 aa34.71■■■■□ 3.15
NPAS1-202ENST00000449844 CUX1P39880 1505 aa34.66■■■■□ 3.14
NPAS1-202ENST00000449844 TRIM26Q12899 539 aaPredicted RBP34.66■■■■□ 3.14
NPAS1-202ENST00000449844 EHMT2Q96KQ7 1210 aa34.65■■■■□ 3.14
NPAS1-202ENST00000449844 RUSC2Q8N2Y8 1516 aa34.65■■■■□ 3.14
NPAS1-202ENST00000449844 LAMC3Q9Y6N6 1575 aa34.53■■■■□ 3.12
NPAS1-202ENST00000449844 NESP48681 1621 aa34.53■■■■□ 3.12
NPAS1-202ENST00000449844 CSRNP3Q8WYN3 585 aa34.52■■■■□ 3.12
NPAS1-202ENST00000449844 FANCD2Q9BXW9 1451 aa34.52■■■■□ 3.12
NPAS1-202ENST00000449844 DNAJC5BQ9UF47 199 aa34.48■■■■□ 3.11
NPAS1-202ENST00000449844 KIF21BO75037 1637 aa34.33■■■■□ 3.09
NPAS1-202ENST00000449844 GOLGA3Q08378 1498 aa34.33■■■■□ 3.09
NPAS1-202ENST00000449844 CEP164Q9UPV0 1460 aa34.29■■■■□ 3.08
NPAS1-202ENST00000449844 DNMBPQ6XZF7 1577 aa34.27■■■■□ 3.08
NPAS1-202ENST00000449844 FGD5Q6ZNL6 1462 aa34.25■■■■□ 3.07
NPAS1-202ENST00000449844 PDS5BQ9NTI5 1447 aa34.24■■■■□ 3.07
NPAS1-202ENST00000449844 TNIKQ9UKE5 1360 aa34.24■■■■□ 3.07
NPAS1-202ENST00000449844 KIF27Q86VH2 1401 aa34.21■■■■□ 3.07
NPAS1-202ENST00000449844 TOPBP1Q92547 1522 aa34.18■■■■□ 3.06
NPAS1-202ENST00000449844 UBTFP17480 764 aaKnown RBP34.16■■■■□ 3.06
NPAS1-202ENST00000449844 KIF21AQ7Z4S6 1674 aa34.16■■■■□ 3.06
NPAS1-202ENST00000449844 CEP162Q5TB80 1403 aa34.12■■■■□ 3.05
NPAS1-202ENST00000449844 CUX2O14529 1486 aa34.09■■■■□ 3.05
NPAS1-202ENST00000449844 URB2Q14146 1524 aaKnown RBP34.07■■■■□ 3.05
NPAS1-202ENST00000449844 RAPGEF2Q9Y4G8 1499 aa34.07■■■■□ 3.04
NPAS1-202ENST00000449844 POLA1P09884 1462 aaPredicted RBP34.03■■■■□ 3.04
NPAS1-202ENST00000449844 ERICH3Q5RHP9 1530 aa34.03■■■■□ 3.04
NPAS1-202ENST00000449844 PRXQ9BXM0 1461 aa34.03■■■■□ 3.04
NPAS1-202ENST00000449844 RAD54L2Q9Y4B4 1467 aa33.94■■■■□ 3.02
NPAS1-202ENST00000449844 ABCA10Q8WWZ4 1543 aa33.92■■■■□ 3.02
NPAS1-202ENST00000449844 WDR97A6NE52 1622 aa33.85■■■■□ 3.01
NPAS1-202ENST00000449844 IGF1RP08069 1367 aa33.85■■■■□ 3.01
NPAS1-202ENST00000449844 MRC2Q9UBG0 1479 aa33.81■■■■□ 3
NPAS1-202ENST00000449844 ZEB1P37275 1124 aaPredicted RBP33.79■■■■□ 3
NPAS1-202ENST00000449844 CLIP1P30622 1438 aa33.77■■■■□ 3
NPAS1-202ENST00000449844 PPARGC1BQ86YN6 1023 aaKnown RBP33.77■■■■□ 3
NPAS1-202ENST00000449844 CARMIL1Q5VZK9 1371 aa33.71■■■□□ 2.99
NPAS1-202ENST00000449844 ABCA5Q8WWZ7 1642 aa33.66■■■□□ 2.98
NPAS1-202ENST00000449844 TARBP1Q13395 1621 aaKnown RBP33.64■■■□□ 2.98
NPAS1-202ENST00000449844 CUL7Q14999 1698 aa33.64■■■□□ 2.97
NPAS1-202ENST00000449844 ERCC6Q03468 1493 aa33.62■■■□□ 2.97
NPAS1-202ENST00000449844 WDR62O43379 1518 aa33.62■■■□□ 2.97
NPAS1-202ENST00000449844 RANGAP1P46060 587 aaPredicted RBP33.58■■■□□ 2.97
NPAS1-202ENST00000449844 TDRD9Q8NDG6 1382 aaKnown RBP33.57■■■□□ 2.96
NPAS1-202ENST00000449844 GAPVD1Q14C86 1478 aa33.56■■■□□ 2.96
NPAS1-202ENST00000449844 VPS8Q8N3P4 1428 aa33.51■■■□□ 2.96
NPAS1-202ENST00000449844 THOC2Q8NI27 1593 aaKnown RBP33.48■■■□□ 2.95
NPAS1-202ENST00000449844 PBRM1Q86U86 1689 aa33.42■■■□□ 2.94
NPAS1-202ENST00000449844 IFT140Q96RY7 1462 aa33.42■■■□□ 2.94
NPAS1-202ENST00000449844 ARAP1Q96P48 1450 aa33.42■■■□□ 2.94
NPAS1-202ENST00000449844 ARHGAP35Q9NRY4 1499 aa33.35■■■□□ 2.93
NPAS1-202ENST00000449844 CTTNBP2Q8WZ74 1663 aa33.34■■■□□ 2.93
NPAS1-202ENST00000449844 AQRO60306 1485 aaKnown RBP eCLIP33.31■■■□□ 2.92
NPAS1-202ENST00000449844 TTBK1Q5TCY1 1321 aaPredicted RBP33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms