Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 CSPG4P11-201ENST00000560634 4910 ntBASIC11.04□□□□□ -0.64
HIST1H2BDP58876 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 AL928654.5-201ENST00000624831 2501 ntBASIC11.04□□□□□ -0.64
HIST1H2BDP58876 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 MAPK10-262ENST00000641051 5738 ntBASIC11.04□□□□□ -0.64
HIST1H2BDP58876 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
HIST1H2BDP58876 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 AC002350.2-201ENST00000623894 1828 ntBASIC11.03□□□□□ -0.64
HIST1H2BDP58876 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.03□□□□□ -0.64
HIST1H2BDP58876 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 AC012618.2-201ENST00000428058 849 ntBASIC11.03□□□□□ -0.64
HIST1H2BDP58876 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 AC096582.2-201ENST00000510860 516 ntBASIC11.03□□□□□ -0.64
HIST1H2BDP58876 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 REXO2-216ENST00000544196 452 ntTSL 3 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 KLF13-207ENST00000560473 489 ntTSL 3 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 IKBKGP1-201ENST00000612193 1073 ntBASIC11.03□□□□□ -0.64
HIST1H2BDP58876 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 GLDC-219ENST00000640208 420 ntTSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 AL805961.1-202ENST00000641562 540 ntBASIC11.03□□□□□ -0.64
HIST1H2BDP58876 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC11.03□□□□□ -0.64
HIST1H2BDP58876 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.02□□□□□ -0.64
HIST1H2BDP58876 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
HIST1H2BDP58876 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.02□□□□□ -0.65
HIST1H2BDP58876 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
HIST1H2BDP58876 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms