RNA–Protein interactions for RNA: ENST00000217971.7

PGRMC1-201, Transcript of progesterone receptor membrane component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGRMC1, Length 1,911 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGRMC1-201ENST00000217971 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
PGRMC1-201ENST00000217971 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
PGRMC1-201ENST00000217971 ABCC9O60706 1549 aa28.73■■■□□ 2.19
PGRMC1-201ENST00000217971 RB1CC1Q8TDY2 1594 aa27.64■■■□□ 2.02
PGRMC1-201ENST00000217971 ZCCHC6Q5VYS8 1495 aaKnown RBP27.6■■■□□ 2.01
PGRMC1-201ENST00000217971 NACADO15069 1562 aa27.56■■■□□ 2
PGRMC1-201ENST00000217971 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
PGRMC1-201ENST00000217971 DCAF8L2P0C7V8 631 aa27.3■■□□□ 1.96
PGRMC1-201ENST00000217971 DCAF1Q9Y4B6 1507 aa27.25■■□□□ 1.95
PGRMC1-201ENST00000217971 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
PGRMC1-201ENST00000217971 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
PGRMC1-201ENST00000217971 PABPN1Q86U42 306 aaKnown RBP eCLIP26.75■■□□□ 1.87
PGRMC1-201ENST00000217971 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
PGRMC1-201ENST00000217971 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
PGRMC1-201ENST00000217971 DNAJC5BQ9UF47 199 aa26.44■■□□□ 1.82
PGRMC1-201ENST00000217971 EIF4G1Q04637 1599 aaKnown RBP26.1■■□□□ 1.77
PGRMC1-201ENST00000217971 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
PGRMC1-201ENST00000217971 CECR2Q9BXF3 1484 aa25.86■■□□□ 1.73
PGRMC1-201ENST00000217971 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
PGRMC1-201ENST00000217971 BAZ1AQ9NRL2 1556 aaPredicted RBP25.46■■□□□ 1.67
PGRMC1-201ENST00000217971 MROH2BQ7Z745 1585 aa25.41■■□□□ 1.66
PGRMC1-201ENST00000217971 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
PGRMC1-201ENST00000217971 SMARCA2P51531 1590 aa25.39■■□□□ 1.65
PGRMC1-201ENST00000217971 RSF1Q96T23 1441 aaPredicted RBP25.39■■□□□ 1.65
PGRMC1-201ENST00000217971 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
PGRMC1-201ENST00000217971 SUPT5HO00267 1087 aaKnown RBP25.35■■□□□ 1.65
PGRMC1-201ENST00000217971 HMGXB3Q12766 1538 aa25.32■■□□□ 1.64
PGRMC1-201ENST00000217971 PEG3Q9GZU2 1588 aa25.29■■□□□ 1.64
PGRMC1-201ENST00000217971 WIZO95785 1651 aa25.21■■□□□ 1.63
PGRMC1-201ENST00000217971 BAZ1BQ9UIG0 1483 aaKnown RBP25.17■■□□□ 1.62
PGRMC1-201ENST00000217971 TOP2AP11388 1531 aaKnown RBP24.93■■□□□ 1.58
PGRMC1-201ENST00000217971 NESP48681 1621 aa24.81■■□□□ 1.56
PGRMC1-201ENST00000217971 LAMC3Q9Y6N6 1575 aa24.8■■□□□ 1.56
PGRMC1-201ENST00000217971 ERCC6Q03468 1493 aa24.8■■□□□ 1.56
PGRMC1-201ENST00000217971 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
PGRMC1-201ENST00000217971 CUX2O14529 1486 aa24.65■■□□□ 1.54
PGRMC1-201ENST00000217971 CADPSQ9ULU8 1353 aa24.62■■□□□ 1.53
PGRMC1-201ENST00000217971 KIF21AQ7Z4S6 1674 aa24.59■■□□□ 1.53
PGRMC1-201ENST00000217971 PDS5BQ9NTI5 1447 aa24.59■■□□□ 1.53
PGRMC1-201ENST00000217971 THOC2Q8NI27 1593 aaKnown RBP24.57■■□□□ 1.52
PGRMC1-201ENST00000217971 CFTRP13569 1480 aa24.47■■□□□ 1.51
PGRMC1-201ENST00000217971 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
PGRMC1-201ENST00000217971 MRC2Q9UBG0 1479 aa24.37■■□□□ 1.49
PGRMC1-201ENST00000217971 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
PGRMC1-201ENST00000217971 FANCD2Q9BXW9 1451 aa24.36■■□□□ 1.49
PGRMC1-201ENST00000217971 WDR62O43379 1518 aa24.33■■□□□ 1.48
PGRMC1-201ENST00000217971 URB2Q14146 1524 aaKnown RBP24.13■■□□□ 1.45
PGRMC1-201ENST00000217971 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
PGRMC1-201ENST00000217971 ABCC8Q09428 1581 aa24.02■■□□□ 1.44
PGRMC1-201ENST00000217971 DNAJC5Q9H3Z4 198 aa23.99■■□□□ 1.43
PGRMC1-201ENST00000217971 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
PGRMC1-201ENST00000217971 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
PGRMC1-201ENST00000217971 WRNQ14191 1432 aaPredicted RBP eCLIP23.91■■□□□ 1.42
PGRMC1-201ENST00000217971 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
PGRMC1-201ENST00000217971 IFT140Q96RY7 1462 aa23.86■■□□□ 1.41
PGRMC1-201ENST00000217971 SYNJ1O43426 1573 aa23.84■■□□□ 1.41
PGRMC1-201ENST00000217971 CUX1P39880 1505 aa23.8■■□□□ 1.4
PGRMC1-201ENST00000217971 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
PGRMC1-201ENST00000217971 BIVM-ERCC5R4GMW8 1640 aa23.78■■□□□ 1.4
PGRMC1-201ENST00000217971 POLA1P09884 1462 aaPredicted RBP23.75■■□□□ 1.39
PGRMC1-201ENST00000217971 TARBP1Q13395 1621 aaKnown RBP23.74■■□□□ 1.39
PGRMC1-201ENST00000217971 ZNF608Q9ULD9 1512 aaPredicted RBP23.73■■□□□ 1.39
PGRMC1-201ENST00000217971 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.39
PGRMC1-201ENST00000217971 FGD5Q6ZNL6 1462 aa23.66■■□□□ 1.38
PGRMC1-201ENST00000217971 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
PGRMC1-201ENST00000217971 RAD54L2Q9Y4B4 1467 aa23.61■■□□□ 1.37
PGRMC1-201ENST00000217971 SOGA1O94964 1423 aa23.6■■□□□ 1.37
PGRMC1-201ENST00000217971 AQRO60306 1485 aaKnown RBP eCLIP23.55■■□□□ 1.36
PGRMC1-201ENST00000217971 OSCARQ8IYS5 282 aa23.49■■□□□ 1.35
PGRMC1-201ENST00000217971 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
PGRMC1-201ENST00000217971 CHD1O14646 1710 aa23.44■■□□□ 1.34
PGRMC1-201ENST00000217971 ABCA10Q8WWZ4 1543 aa23.44■■□□□ 1.34
PGRMC1-201ENST00000217971 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
PGRMC1-201ENST00000217971 FAM9AQ8IZU1 332 aaPredicted RBP23.41■■□□□ 1.34
PGRMC1-201ENST00000217971 PBRM1Q86U86 1689 aa23.4■■□□□ 1.34
PGRMC1-201ENST00000217971 ABCA5Q8WWZ7 1642 aa23.4■■□□□ 1.34
PGRMC1-201ENST00000217971 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
PGRMC1-201ENST00000217971 SNAPC4Q5SXM2 1469 aa23.39■■□□□ 1.33
PGRMC1-201ENST00000217971 EEA1Q15075 1411 aa23.38■■□□□ 1.33
PGRMC1-201ENST00000217971 MAGI1Q96QZ7 1491 aaPredicted RBP23.37■■□□□ 1.33
PGRMC1-201ENST00000217971 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
PGRMC1-201ENST00000217971 KIF27Q86VH2 1401 aa23.34■■□□□ 1.33
PGRMC1-201ENST00000217971 SYNJ2O15056 1496 aa23.27■■□□□ 1.32
PGRMC1-201ENST00000217971 CSRNP3Q8WYN3 585 aa23.26■■□□□ 1.31
PGRMC1-201ENST00000217971 FBLN2P98095 1184 aa23.25■■□□□ 1.31
PGRMC1-201ENST00000217971 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
PGRMC1-201ENST00000217971 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
PGRMC1-201ENST00000217971 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
PGRMC1-201ENST00000217971 ARHGEF11O15085 1522 aa23.19■■□□□ 1.3
PGRMC1-201ENST00000217971 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
PGRMC1-201ENST00000217971 ADAMTS12P58397 1594 aa23.18■■□□□ 1.3
PGRMC1-201ENST00000217971 ERICH3Q5RHP9 1530 aa23.17■■□□□ 1.3
PGRMC1-201ENST00000217971 CLASP1Q7Z460 1538 aa23.17■■□□□ 1.3
PGRMC1-201ENST00000217971 IGF1RP08069 1367 aa23.16■■□□□ 1.3
PGRMC1-201ENST00000217971 LOC105371045A0A1W2PR82 267 aa23.14■■□□□ 1.3
PGRMC1-201ENST00000217971 KIF21BO75037 1637 aa23.12■■□□□ 1.29
PGRMC1-201ENST00000217971 GRIN2AQ12879 1464 aa23.1■■□□□ 1.29
PGRMC1-201ENST00000217971 PRXQ9BXM0 1461 aa23.1■■□□□ 1.29
PGRMC1-201ENST00000217971 FHAD1B1AJZ9 1412 aa23.09■■□□□ 1.29
PGRMC1-201ENST00000217971 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms