RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 NISCHQ9Y2I1 1504 aa25.66■■□□□ 1.7
PCDHB9-201ENST00000316105 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.39
PCDHB9-201ENST00000316105 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.3
PCDHB9-201ENST00000316105 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.28
PCDHB9-201ENST00000316105 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
PCDHB9-201ENST00000316105 FAM9AQ8IZU1 332 aaPredicted RBP21.54■■□□□ 1.04
PCDHB9-201ENST00000316105 ZCCHC6Q5VYS8 1495 aaKnown RBP21.47■■□□□ 1.03
PCDHB9-201ENST00000316105 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
PCDHB9-201ENST00000316105 PCGF6Q9BYE7 350 aa21.44■■□□□ 1.02
PCDHB9-201ENST00000316105 CCDC180Q9P1Z9 1646 aa21.41■■□□□ 1.02
PCDHB9-201ENST00000316105 TRIM41Q8WV44 630 aa21.41■■□□□ 1.02
PCDHB9-201ENST00000316105 ABCC9O60706 1549 aa21.22■□□□□ 0.99
PCDHB9-201ENST00000316105 LOC105371045A0A1W2PR82 267 aa21.11■□□□□ 0.97
PCDHB9-201ENST00000316105 TTBK1Q5TCY1 1321 aaPredicted RBP20.96■□□□□ 0.95
PCDHB9-201ENST00000316105 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
PCDHB9-201ENST00000316105 APLP2Q06481 763 aa20.81■□□□□ 0.92
PCDHB9-201ENST00000316105 TRIM26Q12899 539 aaPredicted RBP20.78■□□□□ 0.92
PCDHB9-201ENST00000316105 HRCP23327 699 aa20.78■□□□□ 0.92
PCDHB9-201ENST00000316105 UBTFP17480 764 aaKnown RBP20.77■□□□□ 0.92
PCDHB9-201ENST00000316105 PPARGC1BQ86YN6 1023 aaKnown RBP20.75■□□□□ 0.91
PCDHB9-201ENST00000316105 RANGAP1P46060 587 aaPredicted RBP20.73■□□□□ 0.91
PCDHB9-201ENST00000316105 PABPN1Q86U42 306 aaKnown RBP eCLIP20.69■□□□□ 0.9
PCDHB9-201ENST00000316105 ZEB1P37275 1124 aaPredicted RBP20.67■□□□□ 0.9
PCDHB9-201ENST00000316105 DCAF1Q9Y4B6 1507 aa20.6■□□□□ 0.89
PCDHB9-201ENST00000316105 CCER1Q8TC90 406 aaPredicted RBP20.59■□□□□ 0.89
PCDHB9-201ENST00000316105 MYO15BQ96JP2 1530 aa20.5■□□□□ 0.87
PCDHB9-201ENST00000316105 RSF1Q96T23 1441 aaPredicted RBP20.43■□□□□ 0.86
PCDHB9-201ENST00000316105 NACADO15069 1562 aa20.33■□□□□ 0.84
PCDHB9-201ENST00000316105 PELP1Q8IZL8 1130 aaKnown RBP20.3■□□□□ 0.84
PCDHB9-201ENST00000316105 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
PCDHB9-201ENST00000316105 ATP1B4Q9UN42 357 aaPredicted RBP20.23■□□□□ 0.83
PCDHB9-201ENST00000316105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
PCDHB9-201ENST00000316105 CECR2Q9BXF3 1484 aa20.14■□□□□ 0.82
PCDHB9-201ENST00000316105 HNRNPUL2Q1KMD3 747 aaKnown RBP20.1■□□□□ 0.81
PCDHB9-201ENST00000316105 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.81
PCDHB9-201ENST00000316105 CENPBP07199 599 aaPredicted RBP19.99■□□□□ 0.79
PCDHB9-201ENST00000316105 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
PCDHB9-201ENST00000316105 ITGAEP38570 1179 aa19.94■□□□□ 0.78
PCDHB9-201ENST00000316105 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
PCDHB9-201ENST00000316105 MYT1Q01538 1121 aa19.9■□□□□ 0.78
PCDHB9-201ENST00000316105 YTHDC1Q96MU7 727 aaKnown RBP19.83■□□□□ 0.77
PCDHB9-201ENST00000316105 WIZO95785 1651 aa19.74■□□□□ 0.75
PCDHB9-201ENST00000316105 DIEXFQ68CQ4 756 aaKnown RBP19.71■□□□□ 0.75
PCDHB9-201ENST00000316105 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
PCDHB9-201ENST00000316105 BAZ1BQ9UIG0 1483 aaKnown RBP19.66■□□□□ 0.74
PCDHB9-201ENST00000316105 CCDC88BA6NC98 1476 aa19.64■□□□□ 0.73
PCDHB9-201ENST00000316105 EEA1Q15075 1411 aa19.63■□□□□ 0.73
PCDHB9-201ENST00000316105 CEP162Q5TB80 1403 aa19.63■□□□□ 0.73
PCDHB9-201ENST00000316105 ABCC8Q09428 1581 aa19.58■□□□□ 0.72
PCDHB9-201ENST00000316105 FAM50AQ14320 339 aaKnown RBP19.58■□□□□ 0.72
PCDHB9-201ENST00000316105 GOLGA3Q08378 1498 aa19.55■□□□□ 0.72
PCDHB9-201ENST00000316105 SOGA1O94964 1423 aa19.55■□□□□ 0.72
PCDHB9-201ENST00000316105 P3H3Q8IVL6 736 aa19.54■□□□□ 0.72
PCDHB9-201ENST00000316105 CLIP1P30622 1438 aa19.53■□□□□ 0.72
PCDHB9-201ENST00000316105 TOP2AP11388 1531 aaKnown RBP19.53■□□□□ 0.72
PCDHB9-201ENST00000316105 TNIKQ9UKE5 1360 aa19.52■□□□□ 0.72
PCDHB9-201ENST00000316105 SMARCA4P51532 1647 aa19.46■□□□□ 0.71
PCDHB9-201ENST00000316105 ZNF316A6NFI3 1004 aaPredicted RBP19.45■□□□□ 0.7
PCDHB9-201ENST00000316105 CEP164Q9UPV0 1460 aa19.42■□□□□ 0.7
PCDHB9-201ENST00000316105 NEUROD1Q13562 356 aa19.36■□□□□ 0.69
PCDHB9-201ENST00000316105 SMARCA2P51531 1590 aa19.33■□□□□ 0.68
PCDHB9-201ENST00000316105 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
PCDHB9-201ENST00000316105 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.68
PCDHB9-201ENST00000316105 NEFLP07196 543 aa19.22■□□□□ 0.67
PCDHB9-201ENST00000316105 ARID3CA6NKF2 412 aa19.22■□□□□ 0.67
PCDHB9-201ENST00000316105 TRIM52Q96A61 297 aa19.21■□□□□ 0.67
PCDHB9-201ENST00000316105 GTF3C3Q9Y5Q9 886 aa19.2■□□□□ 0.66
PCDHB9-201ENST00000316105 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
PCDHB9-201ENST00000316105 FBLN2P98095 1184 aa19.18■□□□□ 0.66
PCDHB9-201ENST00000316105 ACIN1Q9UKV3 1341 aaKnown RBP19.18■□□□□ 0.66
PCDHB9-201ENST00000316105 POLR3GLQ9BT43 218 aa19.12■□□□□ 0.65
PCDHB9-201ENST00000316105 VPS8Q8N3P4 1428 aa19.11■□□□□ 0.65
PCDHB9-201ENST00000316105 CUX2O14529 1486 aa19.08■□□□□ 0.65
PCDHB9-201ENST00000316105 CNGB1Q14028 1251 aaPredicted RBP19.04■□□□□ 0.64
PCDHB9-201ENST00000316105 RAPGEF2Q9Y4G8 1499 aa19.03■□□□□ 0.64
PCDHB9-201ENST00000316105 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
PCDHB9-201ENST00000316105 MTUS2Q5JR59 1369 aa19■□□□□ 0.63
PCDHB9-201ENST00000316105 MIER1Q8N108 512 aa18.96■□□□□ 0.63
PCDHB9-201ENST00000316105 MYT1LQ9UL68 1186 aa18.96■□□□□ 0.63
PCDHB9-201ENST00000316105 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
PCDHB9-201ENST00000316105 ANP32CO43423 234 aa18.94■□□□□ 0.62
PCDHB9-201ENST00000316105 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
PCDHB9-201ENST00000316105 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
PCDHB9-201ENST00000316105 CADPSQ9ULU8 1353 aa18.92■□□□□ 0.62
PCDHB9-201ENST00000316105 CDK11AQ9UQ88 783 aaPredicted RBP18.92■□□□□ 0.62
PCDHB9-201ENST00000316105 TONSLQ96HA7 1378 aa18.91■□□□□ 0.62
PCDHB9-201ENST00000316105 ZNF777Q9ULD5 760 aaPredicted RBP18.91■□□□□ 0.62
PCDHB9-201ENST00000316105 ZNF326Q5BKZ1 582 aaKnown RBP18.89■□□□□ 0.61
PCDHB9-201ENST00000316105 CCNB3Q8WWL7 1395 aa18.89■□□□□ 0.61
PCDHB9-201ENST00000316105 DDX10Q13206 875 aaKnown RBP18.86■□□□□ 0.61
PCDHB9-201ENST00000316105 BICRAQ9NZM4 1560 aa18.86■□□□□ 0.61
PCDHB9-201ENST00000316105 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
PCDHB9-201ENST00000316105 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
PCDHB9-201ENST00000316105 ERICH6Q7L0X2 663 aa18.83■□□□□ 0.6
PCDHB9-201ENST00000316105 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
PCDHB9-201ENST00000316105 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
PCDHB9-201ENST00000316105 CLSPNQ9HAW4 1339 aa18.8■□□□□ 0.6
PCDHB9-201ENST00000316105 BCANQ96GW7 911 aa18.78■□□□□ 0.6
PCDHB9-201ENST00000316105 CHMP7Q8WUX9 453 aaPredicted RBP18.78■□□□□ 0.6
PCDHB9-201ENST00000316105 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms