RNA–Protein interactions for RNA: ENST00000510663.5

SRP72-205, Transcript of signal recognition particle 72, humanhuman

TSL 1 (best) BASIC

Gene SRP72, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP72-205ENST00000510663 NISCHQ9Y2I1 1504 aa27.89■■■□□ 2.06
SRP72-205ENST00000510663 CCDC180Q9P1Z9 1646 aa24.05■■□□□ 1.44
SRP72-205ENST00000510663 ABCC9O60706 1549 aa23.92■■□□□ 1.42
SRP72-205ENST00000510663 SHROOM4Q9ULL8 1493 aa23.89■■□□□ 1.42
SRP72-205ENST00000510663 ZCCHC6Q5VYS8 1495 aaKnown RBP23.56■■□□□ 1.36
SRP72-205ENST00000510663 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
SRP72-205ENST00000510663 DCAF8L2P0C7V8 631 aa23.32■■□□□ 1.32
SRP72-205ENST00000510663 DCAF1Q9Y4B6 1507 aa22.78■■□□□ 1.24
SRP72-205ENST00000510663 RB1CC1Q8TDY2 1594 aa22.77■■□□□ 1.24
SRP72-205ENST00000510663 NACADO15069 1562 aa22.67■■□□□ 1.22
SRP72-205ENST00000510663 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
SRP72-205ENST00000510663 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
SRP72-205ENST00000510663 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.18
SRP72-205ENST00000510663 SCRIBQ14160 1630 aa22.34■■□□□ 1.17
SRP72-205ENST00000510663 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
SRP72-205ENST00000510663 DNAJC5BQ9UF47 199 aa22.2■■□□□ 1.14
SRP72-205ENST00000510663 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
SRP72-205ENST00000510663 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
SRP72-205ENST00000510663 LOC105371045A0A1W2PR82 267 aa22.02■■□□□ 1.12
SRP72-205ENST00000510663 CECR2Q9BXF3 1484 aa21.86■■□□□ 1.09
SRP72-205ENST00000510663 PCGF6Q9BYE7 350 aa21.84■■□□□ 1.09
SRP72-205ENST00000510663 MROH2BQ7Z745 1585 aa21.74■■□□□ 1.07
SRP72-205ENST00000510663 HRCP23327 699 aa21.71■■□□□ 1.07
SRP72-205ENST00000510663 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
SRP72-205ENST00000510663 WIZO95785 1651 aa21.65■■□□□ 1.06
SRP72-205ENST00000510663 FAM9AQ8IZU1 332 aaPredicted RBP21.62■■□□□ 1.05
SRP72-205ENST00000510663 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.04
SRP72-205ENST00000510663 CC2D2AQ9P2K1 1620 aa21.56■■□□□ 1.04
SRP72-205ENST00000510663 EHMT2Q96KQ7 1210 aa21.53■■□□□ 1.04
SRP72-205ENST00000510663 PPARGC1BQ86YN6 1023 aaKnown RBP21.43■■□□□ 1.02
SRP72-205ENST00000510663 BAZ1AQ9NRL2 1556 aaPredicted RBP21.41■■□□□ 1.02
SRP72-205ENST00000510663 TRIM26Q12899 539 aaPredicted RBP21.35■■□□□ 1.01
SRP72-205ENST00000510663 SMARCA4P51532 1647 aa21.28■■□□□ 1
SRP72-205ENST00000510663 TOP2AP11388 1531 aaKnown RBP21.22■□□□□ 0.99
SRP72-205ENST00000510663 CCDC88BA6NC98 1476 aa21.18■□□□□ 0.98
SRP72-205ENST00000510663 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
SRP72-205ENST00000510663 SMARCA2P51531 1590 aa21.14■□□□□ 0.97
SRP72-205ENST00000510663 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
SRP72-205ENST00000510663 NCAPD3P42695 1498 aa20.96■□□□□ 0.95
SRP72-205ENST00000510663 SOGA1O94964 1423 aa20.91■□□□□ 0.94
SRP72-205ENST00000510663 RUSC2Q8N2Y8 1516 aa20.85■□□□□ 0.93
SRP72-205ENST00000510663 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
SRP72-205ENST00000510663 HMGXB3Q12766 1538 aa20.8■□□□□ 0.92
SRP72-205ENST00000510663 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
SRP72-205ENST00000510663 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
SRP72-205ENST00000510663 ZEB1P37275 1124 aaPredicted RBP20.76■□□□□ 0.91
SRP72-205ENST00000510663 CSRNP3Q8WYN3 585 aa20.73■□□□□ 0.91
SRP72-205ENST00000510663 CEP162Q5TB80 1403 aa20.72■□□□□ 0.91
SRP72-205ENST00000510663 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.91
SRP72-205ENST00000510663 UBTFP17480 764 aaKnown RBP20.69■□□□□ 0.9
SRP72-205ENST00000510663 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
SRP72-205ENST00000510663 NESP48681 1621 aa20.67■□□□□ 0.9
SRP72-205ENST00000510663 TNIKQ9UKE5 1360 aa20.65■□□□□ 0.9
SRP72-205ENST00000510663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
SRP72-205ENST00000510663 EEA1Q15075 1411 aa20.62■□□□□ 0.89
SRP72-205ENST00000510663 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
SRP72-205ENST00000510663 GOLGA3Q08378 1498 aa20.56■□□□□ 0.88
SRP72-205ENST00000510663 CCER1Q8TC90 406 aaPredicted RBP20.52■□□□□ 0.88
SRP72-205ENST00000510663 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
SRP72-205ENST00000510663 RANGAP1P46060 587 aaPredicted RBP20.43■□□□□ 0.86
SRP72-205ENST00000510663 LAMC3Q9Y6N6 1575 aa20.42■□□□□ 0.86
SRP72-205ENST00000510663 KIF21BO75037 1637 aa20.41■□□□□ 0.86
SRP72-205ENST00000510663 RAPGEF2Q9Y4G8 1499 aa20.39■□□□□ 0.85
SRP72-205ENST00000510663 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
SRP72-205ENST00000510663 TOP2BQ02880 1626 aa20.36■□□□□ 0.85
SRP72-205ENST00000510663 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
SRP72-205ENST00000510663 CLIP1P30622 1438 aa20.35■□□□□ 0.85
SRP72-205ENST00000510663 CUX2O14529 1486 aa20.31■□□□□ 0.84
SRP72-205ENST00000510663 PDS5BQ9NTI5 1447 aa20.31■□□□□ 0.84
SRP72-205ENST00000510663 BIVM-ERCC5R4GMW8 1640 aa20.29■□□□□ 0.84
SRP72-205ENST00000510663 THOC2Q8NI27 1593 aaKnown RBP20.28■□□□□ 0.84
SRP72-205ENST00000510663 CUX1P39880 1505 aa20.23■□□□□ 0.83
SRP72-205ENST00000510663 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
SRP72-205ENST00000510663 VPS8Q8N3P4 1428 aa20.22■□□□□ 0.83
SRP72-205ENST00000510663 CFTRP13569 1480 aa20.2■□□□□ 0.82
SRP72-205ENST00000510663 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
SRP72-205ENST00000510663 APLP2Q06481 763 aa20.14■□□□□ 0.81
SRP72-205ENST00000510663 PRXQ9BXM0 1461 aa20.13■□□□□ 0.81
SRP72-205ENST00000510663 MRC2Q9UBG0 1479 aa20.12■□□□□ 0.81
SRP72-205ENST00000510663 ERICH3Q5RHP9 1530 aa20.07■□□□□ 0.8
SRP72-205ENST00000510663 KIF27Q86VH2 1401 aa20.06■□□□□ 0.8
SRP72-205ENST00000510663 ARAP1Q96P48 1450 aa20.06■□□□□ 0.8
SRP72-205ENST00000510663 WDR62O43379 1518 aa20.05■□□□□ 0.8
SRP72-205ENST00000510663 DIEXFQ68CQ4 756 aaKnown RBP20.03■□□□□ 0.8
SRP72-205ENST00000510663 DNAJC5Q9H3Z4 198 aa20.01■□□□□ 0.79
SRP72-205ENST00000510663 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
SRP72-205ENST00000510663 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
SRP72-205ENST00000510663 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
SRP72-205ENST00000510663 KANK4Q5T7N3 995 aaPredicted RBP19.99■□□□□ 0.79
SRP72-205ENST00000510663 ZNF316A6NFI3 1004 aaPredicted RBP19.91■□□□□ 0.78
SRP72-205ENST00000510663 ARHGAP35Q9NRY4 1499 aa19.89■□□□□ 0.77
SRP72-205ENST00000510663 IGF1RP08069 1367 aa19.89■□□□□ 0.77
SRP72-205ENST00000510663 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
SRP72-205ENST00000510663 NEUROD1Q13562 356 aa19.83■□□□□ 0.77
SRP72-205ENST00000510663 TOPBP1Q92547 1522 aa19.82■□□□□ 0.76
SRP72-205ENST00000510663 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
SRP72-205ENST00000510663 ACIN1Q9UKV3 1341 aaKnown RBP19.78■□□□□ 0.76
SRP72-205ENST00000510663 ITGAEP38570 1179 aa19.76■□□□□ 0.75
SRP72-205ENST00000510663 RAD54L2Q9Y4B4 1467 aa19.74■□□□□ 0.75
SRP72-205ENST00000510663 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms