RNA–Protein interactions for RNA: ENST00000636489.1

EFHC1-221, Transcript of EF-hand domain containing 1, humanhuman

TSL 5 BASIC

Gene EFHC1, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-221ENST00000636489 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
EFHC1-221ENST00000636489 CCDC180Q9P1Z9 1646 aa25.49■■□□□ 1.67
EFHC1-221ENST00000636489 ZCCHC6Q5VYS8 1495 aaKnown RBP25■■□□□ 1.59
EFHC1-221ENST00000636489 SHROOM4Q9ULL8 1493 aa24.81■■□□□ 1.56
EFHC1-221ENST00000636489 DCAF8L2P0C7V8 631 aa24.6■■□□□ 1.53
EFHC1-221ENST00000636489 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
EFHC1-221ENST00000636489 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
EFHC1-221ENST00000636489 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
EFHC1-221ENST00000636489 ABCC9O60706 1549 aa23.85■■□□□ 1.41
EFHC1-221ENST00000636489 SCRIBQ14160 1630 aa23.69■■□□□ 1.38
EFHC1-221ENST00000636489 NACADO15069 1562 aa23.67■■□□□ 1.38
EFHC1-221ENST00000636489 RB1CC1Q8TDY2 1594 aa23.36■■□□□ 1.33
EFHC1-221ENST00000636489 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
EFHC1-221ENST00000636489 RSF1Q96T23 1441 aaPredicted RBP23.27■■□□□ 1.32
EFHC1-221ENST00000636489 CECR2Q9BXF3 1484 aa23.09■■□□□ 1.29
EFHC1-221ENST00000636489 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
EFHC1-221ENST00000636489 UNC13AQ9UPW8 1703 aa22.91■■□□□ 1.26
EFHC1-221ENST00000636489 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
EFHC1-221ENST00000636489 WIZO95785 1651 aa22.83■■□□□ 1.25
EFHC1-221ENST00000636489 PABPN1Q86U42 306 aaKnown RBP eCLIP22.69■■□□□ 1.22
EFHC1-221ENST00000636489 SMARCA4P51532 1647 aa22.67■■□□□ 1.22
EFHC1-221ENST00000636489 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
EFHC1-221ENST00000636489 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
EFHC1-221ENST00000636489 LOC105371045A0A1W2PR82 267 aa22.55■■□□□ 1.2
EFHC1-221ENST00000636489 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
EFHC1-221ENST00000636489 CCDC88BA6NC98 1476 aa22.39■■□□□ 1.18
EFHC1-221ENST00000636489 SMARCA2P51531 1590 aa22.37■■□□□ 1.17
EFHC1-221ENST00000636489 EIF4G1Q04637 1599 aaKnown RBP22.35■■□□□ 1.17
EFHC1-221ENST00000636489 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
EFHC1-221ENST00000636489 PEG3Q9GZU2 1588 aa22.3■■□□□ 1.16
EFHC1-221ENST00000636489 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
EFHC1-221ENST00000636489 ABCC8Q09428 1581 aa22.13■■□□□ 1.13
EFHC1-221ENST00000636489 BAZ1BQ9UIG0 1483 aaKnown RBP22.12■■□□□ 1.13
EFHC1-221ENST00000636489 PCGF6Q9BYE7 350 aa22.1■■□□□ 1.13
EFHC1-221ENST00000636489 EHMT2Q96KQ7 1210 aa22.06■■□□□ 1.12
EFHC1-221ENST00000636489 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.1
EFHC1-221ENST00000636489 NCAPD3P42695 1498 aa21.88■■□□□ 1.09
EFHC1-221ENST00000636489 TRIM26Q12899 539 aaPredicted RBP21.87■■□□□ 1.09
EFHC1-221ENST00000636489 SOGA1O94964 1423 aa21.85■■□□□ 1.09
EFHC1-221ENST00000636489 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
EFHC1-221ENST00000636489 HRCP23327 699 aa21.84■■□□□ 1.09
EFHC1-221ENST00000636489 EEA1Q15075 1411 aa21.8■■□□□ 1.08
EFHC1-221ENST00000636489 SYNJ1O43426 1573 aa21.76■■□□□ 1.07
EFHC1-221ENST00000636489 CSRNP3Q8WYN3 585 aa21.75■■□□□ 1.07
EFHC1-221ENST00000636489 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
EFHC1-221ENST00000636489 TNIKQ9UKE5 1360 aa21.62■■□□□ 1.05
EFHC1-221ENST00000636489 UBTFP17480 764 aaKnown RBP21.6■■□□□ 1.05
EFHC1-221ENST00000636489 TOP2BQ02880 1626 aa21.58■■□□□ 1.05
EFHC1-221ENST00000636489 GOLGA3Q08378 1498 aa21.57■■□□□ 1.04
EFHC1-221ENST00000636489 CEP162Q5TB80 1403 aa21.57■■□□□ 1.04
EFHC1-221ENST00000636489 CFTRP13569 1480 aa21.56■■□□□ 1.04
EFHC1-221ENST00000636489 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
EFHC1-221ENST00000636489 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
EFHC1-221ENST00000636489 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
EFHC1-221ENST00000636489 PPARGC1BQ86YN6 1023 aaKnown RBP21.51■■□□□ 1.03
EFHC1-221ENST00000636489 KIF21BO75037 1637 aa21.48■■□□□ 1.03
EFHC1-221ENST00000636489 CUX1P39880 1505 aa21.44■■□□□ 1.02
EFHC1-221ENST00000636489 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
EFHC1-221ENST00000636489 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
EFHC1-221ENST00000636489 RAPGEF2Q9Y4G8 1499 aa21.36■■□□□ 1.01
EFHC1-221ENST00000636489 CLIP1P30622 1438 aa21.29■■□□□ 1
EFHC1-221ENST00000636489 KIF27Q86VH2 1401 aa21.28■■□□□ 1
EFHC1-221ENST00000636489 ZEB1P37275 1124 aaPredicted RBP21.25■□□□□ 0.99
EFHC1-221ENST00000636489 PRXQ9BXM0 1461 aa21.25■□□□□ 0.99
EFHC1-221ENST00000636489 TTBK1Q5TCY1 1321 aaPredicted RBP21.25■□□□□ 0.99
EFHC1-221ENST00000636489 ERICH3Q5RHP9 1530 aa21.23■□□□□ 0.99
EFHC1-221ENST00000636489 RANGAP1P46060 587 aaPredicted RBP21.18■□□□□ 0.98
EFHC1-221ENST00000636489 FANCD2Q9BXW9 1451 aa21.18■□□□□ 0.98
EFHC1-221ENST00000636489 VPS8Q8N3P4 1428 aa21.15■□□□□ 0.98
EFHC1-221ENST00000636489 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.97
EFHC1-221ENST00000636489 CUX2O14529 1486 aa21.13■□□□□ 0.97
EFHC1-221ENST00000636489 NESP48681 1621 aa21.11■□□□□ 0.97
EFHC1-221ENST00000636489 APLP2Q06481 763 aa21.06■□□□□ 0.96
EFHC1-221ENST00000636489 IGF1RP08069 1367 aa21.06■□□□□ 0.96
EFHC1-221ENST00000636489 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
EFHC1-221ENST00000636489 LAMC3Q9Y6N6 1575 aa21.02■□□□□ 0.96
EFHC1-221ENST00000636489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.01■□□□□ 0.95
EFHC1-221ENST00000636489 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
EFHC1-221ENST00000636489 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
EFHC1-221ENST00000636489 CCER1Q8TC90 406 aaPredicted RBP20.98■□□□□ 0.95
EFHC1-221ENST00000636489 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
EFHC1-221ENST00000636489 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
EFHC1-221ENST00000636489 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
EFHC1-221ENST00000636489 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.94
EFHC1-221ENST00000636489 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
EFHC1-221ENST00000636489 PDS5BQ9NTI5 1447 aa20.91■□□□□ 0.94
EFHC1-221ENST00000636489 ARHGAP35Q9NRY4 1499 aa20.88■□□□□ 0.93
EFHC1-221ENST00000636489 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
EFHC1-221ENST00000636489 HNRNPUL2Q1KMD3 747 aaKnown RBP20.8■□□□□ 0.92
EFHC1-221ENST00000636489 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.92
EFHC1-221ENST00000636489 KIF21AQ7Z4S6 1674 aa20.77■□□□□ 0.92
EFHC1-221ENST00000636489 CUL7Q14999 1698 aa20.74■□□□□ 0.91
EFHC1-221ENST00000636489 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
EFHC1-221ENST00000636489 TDRD9Q8NDG6 1382 aaKnown RBP20.72■□□□□ 0.91
EFHC1-221ENST00000636489 GAPVD1Q14C86 1478 aa20.67■□□□□ 0.9
EFHC1-221ENST00000636489 ABCA5Q8WWZ7 1642 aa20.67■□□□□ 0.9
EFHC1-221ENST00000636489 P3H3Q8IVL6 736 aa20.65■□□□□ 0.9
EFHC1-221ENST00000636489 FHAD1B1AJZ9 1412 aa20.63■□□□□ 0.89
EFHC1-221ENST00000636489 MAP3K1Q13233 1512 aa20.6■□□□□ 0.89
EFHC1-221ENST00000636489 CTTNBP2Q8WZ74 1663 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms