RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 NISCHQ9Y2I1 1504 aa25.99■■□□□ 1.75
SIRPA-203ENST00000400068 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
SIRPA-203ENST00000400068 SHROOM4Q9ULL8 1493 aa23.82■■□□□ 1.4
SIRPA-203ENST00000400068 SUPT5HO00267 1087 aaKnown RBP23.6■■□□□ 1.37
SIRPA-203ENST00000400068 EHMT2Q96KQ7 1210 aa22.45■■□□□ 1.18
SIRPA-203ENST00000400068 FAM9AQ8IZU1 332 aaPredicted RBP22.1■■□□□ 1.13
SIRPA-203ENST00000400068 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
SIRPA-203ENST00000400068 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
SIRPA-203ENST00000400068 ABCC9O60706 1549 aa21.73■■□□□ 1.07
SIRPA-203ENST00000400068 LOC105371045A0A1W2PR82 267 aa21.71■■□□□ 1.07
SIRPA-203ENST00000400068 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
SIRPA-203ENST00000400068 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
SIRPA-203ENST00000400068 TTBK1Q5TCY1 1321 aaPredicted RBP21.59■■□□□ 1.05
SIRPA-203ENST00000400068 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
SIRPA-203ENST00000400068 PPARGC1BQ86YN6 1023 aaKnown RBP21.42■■□□□ 1.02
SIRPA-203ENST00000400068 RANGAP1P46060 587 aaPredicted RBP21.32■■□□□ 1
SIRPA-203ENST00000400068 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
SIRPA-203ENST00000400068 PELP1Q8IZL8 1130 aaKnown RBP21.28■■□□□ 1
SIRPA-203ENST00000400068 SCRIBQ14160 1630 aa21.22■□□□□ 0.99
SIRPA-203ENST00000400068 MYT1Q01538 1121 aa21.15■□□□□ 0.98
SIRPA-203ENST00000400068 UBTFP17480 764 aaKnown RBP21.09■□□□□ 0.97
SIRPA-203ENST00000400068 MYO15BQ96JP2 1530 aa21.04■□□□□ 0.96
SIRPA-203ENST00000400068 HRCP23327 699 aa21.01■□□□□ 0.95
SIRPA-203ENST00000400068 TRIM26Q12899 539 aaPredicted RBP20.96■□□□□ 0.95
SIRPA-203ENST00000400068 APLP2Q06481 763 aa20.89■□□□□ 0.94
SIRPA-203ENST00000400068 CCER1Q8TC90 406 aaPredicted RBP20.83■□□□□ 0.92
SIRPA-203ENST00000400068 RSF1Q96T23 1441 aaPredicted RBP20.77■□□□□ 0.92
SIRPA-203ENST00000400068 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
SIRPA-203ENST00000400068 CECR2Q9BXF3 1484 aa20.64■□□□□ 0.89
SIRPA-203ENST00000400068 ATP1B4Q9UN42 357 aaPredicted RBP20.63■□□□□ 0.89
SIRPA-203ENST00000400068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.6■□□□□ 0.89
SIRPA-203ENST00000400068 ZEB1P37275 1124 aaPredicted RBP20.56■□□□□ 0.88
SIRPA-203ENST00000400068 HNRNPUL2Q1KMD3 747 aaKnown RBP20.51■□□□□ 0.87
SIRPA-203ENST00000400068 NACADO15069 1562 aa20.43■□□□□ 0.86
SIRPA-203ENST00000400068 ITGAEP38570 1179 aa20.39■□□□□ 0.85
SIRPA-203ENST00000400068 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
SIRPA-203ENST00000400068 MROH2BQ7Z745 1585 aa20.35■□□□□ 0.85
SIRPA-203ENST00000400068 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
SIRPA-203ENST00000400068 YTHDC1Q96MU7 727 aaKnown RBP20.22■□□□□ 0.83
SIRPA-203ENST00000400068 WIZO95785 1651 aa20.14■□□□□ 0.81
SIRPA-203ENST00000400068 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.8
SIRPA-203ENST00000400068 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
SIRPA-203ENST00000400068 ABCC8Q09428 1581 aa20.02■□□□□ 0.8
SIRPA-203ENST00000400068 SOGA1O94964 1423 aa19.98■□□□□ 0.79
SIRPA-203ENST00000400068 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
SIRPA-203ENST00000400068 CENPBP07199 599 aaPredicted RBP19.93■□□□□ 0.78
SIRPA-203ENST00000400068 DIEXFQ68CQ4 756 aaKnown RBP19.93■□□□□ 0.78
SIRPA-203ENST00000400068 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
SIRPA-203ENST00000400068 FAM50AQ14320 339 aaKnown RBP19.89■□□□□ 0.77
SIRPA-203ENST00000400068 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.77
SIRPA-203ENST00000400068 ERICH6Q7L0X2 663 aa19.88■□□□□ 0.77
SIRPA-203ENST00000400068 CEP162Q5TB80 1403 aa19.88■□□□□ 0.77
SIRPA-203ENST00000400068 ARID3CA6NKF2 412 aa19.81■□□□□ 0.76
SIRPA-203ENST00000400068 CLIP1P30622 1438 aa19.75■□□□□ 0.75
SIRPA-203ENST00000400068 NEUROD1Q13562 356 aa19.73■□□□□ 0.75
SIRPA-203ENST00000400068 RUSC2Q8N2Y8 1516 aa19.72■□□□□ 0.75
SIRPA-203ENST00000400068 TOP2AP11388 1531 aaKnown RBP19.7■□□□□ 0.74
SIRPA-203ENST00000400068 SMARCA4P51532 1647 aa19.7■□□□□ 0.74
SIRPA-203ENST00000400068 TNIKQ9UKE5 1360 aa19.68■□□□□ 0.74
SIRPA-203ENST00000400068 GOLGA3Q08378 1498 aa19.68■□□□□ 0.74
SIRPA-203ENST00000400068 FBLN2P98095 1184 aa19.62■□□□□ 0.73
SIRPA-203ENST00000400068 ZNF316A6NFI3 1004 aaPredicted RBP19.62■□□□□ 0.73
SIRPA-203ENST00000400068 EEA1Q15075 1411 aa19.6■□□□□ 0.73
SIRPA-203ENST00000400068 CNGB1Q14028 1251 aaPredicted RBP19.59■□□□□ 0.73
SIRPA-203ENST00000400068 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
SIRPA-203ENST00000400068 CEP164Q9UPV0 1460 aa19.53■□□□□ 0.72
SIRPA-203ENST00000400068 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
SIRPA-203ENST00000400068 SLC24A1O60721 1099 aa19.52■□□□□ 0.72
SIRPA-203ENST00000400068 TRIM52Q96A61 297 aa19.48■□□□□ 0.71
SIRPA-203ENST00000400068 GTF3C3Q9Y5Q9 886 aa19.48■□□□□ 0.71
SIRPA-203ENST00000400068 POLR3GLQ9BT43 218 aa19.47■□□□□ 0.71
SIRPA-203ENST00000400068 KIF27Q86VH2 1401 aa19.44■□□□□ 0.7
SIRPA-203ENST00000400068 PRKCSHP14314 528 aaPredicted RBP19.43■□□□□ 0.7
SIRPA-203ENST00000400068 KANK4Q5T7N3 995 aaPredicted RBP19.42■□□□□ 0.7
SIRPA-203ENST00000400068 RAPGEF2Q9Y4G8 1499 aa19.39■□□□□ 0.69
SIRPA-203ENST00000400068 CUX2O14529 1486 aa19.36■□□□□ 0.69
SIRPA-203ENST00000400068 ACIN1Q9UKV3 1341 aaKnown RBP19.35■□□□□ 0.69
SIRPA-203ENST00000400068 CHIC2Q9UKJ5 165 aa19.35■□□□□ 0.69
SIRPA-203ENST00000400068 HIRIP3Q9BW71 556 aaPredicted RBP19.34■□□□□ 0.69
SIRPA-203ENST00000400068 MIER1Q8N108 512 aa19.33■□□□□ 0.68
SIRPA-203ENST00000400068 SCAF1Q9H7N4 1312 aaKnown RBP19.29■□□□□ 0.68
SIRPA-203ENST00000400068 VPS8Q8N3P4 1428 aa19.28■□□□□ 0.68
SIRPA-203ENST00000400068 ZNF777Q9ULD5 760 aaPredicted RBP19.28■□□□□ 0.68
SIRPA-203ENST00000400068 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
SIRPA-203ENST00000400068 ZNF326Q5BKZ1 582 aaKnown RBP19.25■□□□□ 0.67
SIRPA-203ENST00000400068 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
SIRPA-203ENST00000400068 MYT1LQ9UL68 1186 aa19.23■□□□□ 0.67
SIRPA-203ENST00000400068 MTUS2Q5JR59 1369 aa19.2■□□□□ 0.66
SIRPA-203ENST00000400068 DDX10Q13206 875 aaKnown RBP19.19■□□□□ 0.66
SIRPA-203ENST00000400068 BCL11AQ9H165 835 aa19.19■□□□□ 0.66
SIRPA-203ENST00000400068 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
SIRPA-203ENST00000400068 TDRD9Q8NDG6 1382 aaKnown RBP19.18■□□□□ 0.66
SIRPA-203ENST00000400068 NEFLP07196 543 aa19.17■□□□□ 0.66
SIRPA-203ENST00000400068 BCANQ96GW7 911 aa19.17■□□□□ 0.66
SIRPA-203ENST00000400068 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
SIRPA-203ENST00000400068 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
SIRPA-203ENST00000400068 RRP7BPQ9NSQ0 103 aa19.16■□□□□ 0.66
SIRPA-203ENST00000400068 UNC13AQ9UPW8 1703 aa19.14■□□□□ 0.65
SIRPA-203ENST00000400068 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
SIRPA-203ENST00000400068 CCNB3Q8WWL7 1395 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms