RNA–Protein interactions for RNA: ENST00000506329.2

AP002754.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP002754.1, Length 2,349 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002754.1-201ENST00000506329 NISCHQ9Y2I1 1504 aa24.83■■□□□ 1.57
AP002754.1-201ENST00000506329 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
AP002754.1-201ENST00000506329 HRCP23327 699 aa21.1■□□□□ 0.97
AP002754.1-201ENST00000506329 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.96
AP002754.1-201ENST00000506329 SUPT5HO00267 1087 aaKnown RBP20.92■□□□□ 0.94
AP002754.1-201ENST00000506329 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
AP002754.1-201ENST00000506329 PPARGC1BQ86YN6 1023 aaKnown RBP20.78■□□□□ 0.92
AP002754.1-201ENST00000506329 PCGF6Q9BYE7 350 aa20.75■□□□□ 0.91
AP002754.1-201ENST00000506329 MYO15BQ96JP2 1530 aa20.71■□□□□ 0.91
AP002754.1-201ENST00000506329 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
AP002754.1-201ENST00000506329 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
AP002754.1-201ENST00000506329 DCAF1Q9Y4B6 1507 aa20.44■□□□□ 0.86
AP002754.1-201ENST00000506329 PELP1Q8IZL8 1130 aaKnown RBP20.39■□□□□ 0.86
AP002754.1-201ENST00000506329 ABCC9O60706 1549 aa20.37■□□□□ 0.85
AP002754.1-201ENST00000506329 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.81
AP002754.1-201ENST00000506329 NACADO15069 1562 aa20.03■□□□□ 0.8
AP002754.1-201ENST00000506329 TRIM26Q12899 539 aaPredicted RBP20.01■□□□□ 0.79
AP002754.1-201ENST00000506329 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
AP002754.1-201ENST00000506329 SCRIBQ14160 1630 aa19.94■□□□□ 0.78
AP002754.1-201ENST00000506329 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
AP002754.1-201ENST00000506329 ZEB1P37275 1124 aaPredicted RBP19.76■□□□□ 0.75
AP002754.1-201ENST00000506329 MYT1Q01538 1121 aa19.63■□□□□ 0.73
AP002754.1-201ENST00000506329 UNC13AQ9UPW8 1703 aa19.46■□□□□ 0.71
AP002754.1-201ENST00000506329 NEUROD1Q13562 356 aa19.46■□□□□ 0.71
AP002754.1-201ENST00000506329 ACIN1Q9UKV3 1341 aaKnown RBP19.46■□□□□ 0.71
AP002754.1-201ENST00000506329 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
AP002754.1-201ENST00000506329 RSF1Q96T23 1441 aaPredicted RBP19.35■□□□□ 0.69
AP002754.1-201ENST00000506329 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
AP002754.1-201ENST00000506329 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
AP002754.1-201ENST00000506329 GTF3C3Q9Y5Q9 886 aa19.34■□□□□ 0.69
AP002754.1-201ENST00000506329 PABPN1Q86U42 306 aaKnown RBP eCLIP19.29■□□□□ 0.68
AP002754.1-201ENST00000506329 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
AP002754.1-201ENST00000506329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
AP002754.1-201ENST00000506329 BICRAQ9NZM4 1560 aa19.24■□□□□ 0.67
AP002754.1-201ENST00000506329 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
AP002754.1-201ENST00000506329 DIEXFQ68CQ4 756 aaKnown RBP19.16■□□□□ 0.66
AP002754.1-201ENST00000506329 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
AP002754.1-201ENST00000506329 CENPBP07199 599 aaPredicted RBP19.15■□□□□ 0.66
AP002754.1-201ENST00000506329 CCER1Q8TC90 406 aaPredicted RBP19.15■□□□□ 0.66
AP002754.1-201ENST00000506329 WIZO95785 1651 aa19.1■□□□□ 0.65
AP002754.1-201ENST00000506329 SMARCA4P51532 1647 aa19.06■□□□□ 0.64
AP002754.1-201ENST00000506329 YTHDC1Q96MU7 727 aaKnown RBP18.9■□□□□ 0.62
AP002754.1-201ENST00000506329 TTBK1Q5TCY1 1321 aaPredicted RBP18.87■□□□□ 0.61
AP002754.1-201ENST00000506329 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
AP002754.1-201ENST00000506329 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
AP002754.1-201ENST00000506329 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
AP002754.1-201ENST00000506329 ATAD2BQ9ULI0 1458 aa18.72■□□□□ 0.59
AP002754.1-201ENST00000506329 MIER1Q8N108 512 aa18.72■□□□□ 0.59
AP002754.1-201ENST00000506329 CCDC88BA6NC98 1476 aa18.7■□□□□ 0.58
AP002754.1-201ENST00000506329 SMARCA2P51531 1590 aa18.69■□□□□ 0.58
AP002754.1-201ENST00000506329 EIF4G1Q04637 1599 aaKnown RBP18.68■□□□□ 0.58
AP002754.1-201ENST00000506329 BAZ1BQ9UIG0 1483 aaKnown RBP18.65■□□□□ 0.58
AP002754.1-201ENST00000506329 WRNQ14191 1432 aaPredicted RBP eCLIP18.54■□□□□ 0.56
AP002754.1-201ENST00000506329 BCL11AQ9H165 835 aa18.54■□□□□ 0.56
AP002754.1-201ENST00000506329 NCAPD3P42695 1498 aa18.5■□□□□ 0.55
AP002754.1-201ENST00000506329 CEP162Q5TB80 1403 aa18.49■□□□□ 0.55
AP002754.1-201ENST00000506329 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
AP002754.1-201ENST00000506329 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
AP002754.1-201ENST00000506329 HNRNPUL2Q1KMD3 747 aaKnown RBP18.4■□□□□ 0.54
AP002754.1-201ENST00000506329 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
AP002754.1-201ENST00000506329 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
AP002754.1-201ENST00000506329 TNIKQ9UKE5 1360 aa18.34■□□□□ 0.53
AP002754.1-201ENST00000506329 SOGA1O94964 1423 aa18.33■□□□□ 0.52
AP002754.1-201ENST00000506329 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
AP002754.1-201ENST00000506329 TSHZ2Q9NRE2 1034 aa18.32■□□□□ 0.52
AP002754.1-201ENST00000506329 ANP32EQ9BTT0 268 aa18.31■□□□□ 0.52
AP002754.1-201ENST00000506329 RUSC2Q8N2Y8 1516 aa18.24■□□□□ 0.51
AP002754.1-201ENST00000506329 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
AP002754.1-201ENST00000506329 CSRNP3Q8WYN3 585 aa18.23■□□□□ 0.51
AP002754.1-201ENST00000506329 CLSPNQ9HAW4 1339 aa18.19■□□□□ 0.5
AP002754.1-201ENST00000506329 CFTRP13569 1480 aa18.15■□□□□ 0.5
AP002754.1-201ENST00000506329 SYNJ1O43426 1573 aa18.14■□□□□ 0.49
AP002754.1-201ENST00000506329 GOLGA3Q08378 1498 aa18.09■□□□□ 0.49
AP002754.1-201ENST00000506329 CADPSQ9ULU8 1353 aa18.08■□□□□ 0.48
AP002754.1-201ENST00000506329 BCANQ96GW7 911 aa18.06■□□□□ 0.48
AP002754.1-201ENST00000506329 EEA1Q15075 1411 aa18.06■□□□□ 0.48
AP002754.1-201ENST00000506329 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
AP002754.1-201ENST00000506329 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
AP002754.1-201ENST00000506329 PRKCSHP14314 528 aaPredicted RBP18.02■□□□□ 0.48
AP002754.1-201ENST00000506329 TOP2BQ02880 1626 aa18.02■□□□□ 0.47
AP002754.1-201ENST00000506329 DHX57Q6P158 1386 aaKnown RBP18■□□□□ 0.47
AP002754.1-201ENST00000506329 CLIP1P30622 1438 aa17.99■□□□□ 0.47
AP002754.1-201ENST00000506329 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
AP002754.1-201ENST00000506329 BIVM-ERCC5R4GMW8 1640 aa17.98■□□□□ 0.47
AP002754.1-201ENST00000506329 APLP2Q06481 763 aa17.98■□□□□ 0.47
AP002754.1-201ENST00000506329 CUX1P39880 1505 aa17.95■□□□□ 0.46
AP002754.1-201ENST00000506329 VPS8Q8N3P4 1428 aa17.95■□□□□ 0.46
AP002754.1-201ENST00000506329 FKBP8Q14318 412 aa17.93■□□□□ 0.46
AP002754.1-201ENST00000506329 NESP48681 1621 aa17.92■□□□□ 0.46
AP002754.1-201ENST00000506329 FANCD2Q9BXW9 1451 aa17.89■□□□□ 0.46
AP002754.1-201ENST00000506329 CEP164Q9UPV0 1460 aa17.89■□□□□ 0.46
AP002754.1-201ENST00000506329 RBM19Q9Y4C8 960 aaKnown RBP17.88■□□□□ 0.45
AP002754.1-201ENST00000506329 LAMC3Q9Y6N6 1575 aa17.85■□□□□ 0.45
AP002754.1-201ENST00000506329 KIF21BO75037 1637 aa17.83■□□□□ 0.44
AP002754.1-201ENST00000506329 ITGAEP38570 1179 aa17.8■□□□□ 0.44
AP002754.1-201ENST00000506329 RAPGEF2Q9Y4G8 1499 aa17.8■□□□□ 0.44
AP002754.1-201ENST00000506329 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.44
AP002754.1-201ENST00000506329 MSH5O43196 834 aa17.76■□□□□ 0.43
AP002754.1-201ENST00000506329 FGD5Q6ZNL6 1462 aa17.76■□□□□ 0.43
AP002754.1-201ENST00000506329 KIF27Q86VH2 1401 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms