RNA–Protein interactions for RNA: ENST00000409641.5

NAB1-203, Transcript of NGFI-A binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NAB1, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAB1-203ENST00000409641 NISCHQ9Y2I1 1504 aa24.51■■□□□ 1.51
NAB1-203ENST00000409641 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
NAB1-203ENST00000409641 HRCP23327 699 aa21.17■□□□□ 0.98
NAB1-203ENST00000409641 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
NAB1-203ENST00000409641 CCDC180Q9P1Z9 1646 aa21.08■□□□□ 0.97
NAB1-203ENST00000409641 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
NAB1-203ENST00000409641 PCGF6Q9BYE7 350 aa20.82■□□□□ 0.92
NAB1-203ENST00000409641 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
NAB1-203ENST00000409641 PPARGC1BQ86YN6 1023 aaKnown RBP20.77■□□□□ 0.92
NAB1-203ENST00000409641 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
NAB1-203ENST00000409641 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
NAB1-203ENST00000409641 LOC105371045A0A1W2PR82 267 aa20.31■□□□□ 0.84
NAB1-203ENST00000409641 TRIM26Q12899 539 aaPredicted RBP20.18■□□□□ 0.82
NAB1-203ENST00000409641 DCAF8L2P0C7V8 631 aa20.13■□□□□ 0.81
NAB1-203ENST00000409641 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
NAB1-203ENST00000409641 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
NAB1-203ENST00000409641 ZEB1P37275 1124 aaPredicted RBP19.93■□□□□ 0.78
NAB1-203ENST00000409641 TRIM41Q8WV44 630 aa19.57■□□□□ 0.72
NAB1-203ENST00000409641 FAM9AQ8IZU1 332 aaPredicted RBP19.56■□□□□ 0.72
NAB1-203ENST00000409641 ABCC9O60706 1549 aa19.52■□□□□ 0.72
NAB1-203ENST00000409641 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
NAB1-203ENST00000409641 SCRIBQ14160 1630 aa19.49■□□□□ 0.71
NAB1-203ENST00000409641 NACADO15069 1562 aa19.48■□□□□ 0.71
NAB1-203ENST00000409641 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
NAB1-203ENST00000409641 NEUROD1Q13562 356 aa19.47■□□□□ 0.71
NAB1-203ENST00000409641 RSF1Q96T23 1441 aaPredicted RBP19.43■□□□□ 0.7
NAB1-203ENST00000409641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.36■□□□□ 0.69
NAB1-203ENST00000409641 GTF3C3Q9Y5Q9 886 aa19.33■□□□□ 0.68
NAB1-203ENST00000409641 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
NAB1-203ENST00000409641 CCER1Q8TC90 406 aaPredicted RBP19.29■□□□□ 0.68
NAB1-203ENST00000409641 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
NAB1-203ENST00000409641 MYT1Q01538 1121 aa19.23■□□□□ 0.67
NAB1-203ENST00000409641 CENPBP07199 599 aaPredicted RBP19.22■□□□□ 0.67
NAB1-203ENST00000409641 CECR2Q9BXF3 1484 aa19■□□□□ 0.63
NAB1-203ENST00000409641 TTBK1Q5TCY1 1321 aaPredicted RBP18.98■□□□□ 0.63
NAB1-203ENST00000409641 MROH2BQ7Z745 1585 aa18.97■□□□□ 0.63
NAB1-203ENST00000409641 ZNF316A6NFI3 1004 aaPredicted RBP18.92■□□□□ 0.62
NAB1-203ENST00000409641 YTHDC1Q96MU7 727 aaKnown RBP18.92■□□□□ 0.62
NAB1-203ENST00000409641 BAZ1AQ9NRL2 1556 aaPredicted RBP18.87■□□□□ 0.61
NAB1-203ENST00000409641 WIZO95785 1651 aa18.87■□□□□ 0.61
NAB1-203ENST00000409641 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.61
NAB1-203ENST00000409641 UNC13AQ9UPW8 1703 aa18.85■□□□□ 0.61
NAB1-203ENST00000409641 MIER1Q8N108 512 aa18.8■□□□□ 0.6
NAB1-203ENST00000409641 CEP162Q5TB80 1403 aa18.77■□□□□ 0.6
NAB1-203ENST00000409641 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
NAB1-203ENST00000409641 SMARCA4P51532 1647 aa18.72■□□□□ 0.59
NAB1-203ENST00000409641 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
NAB1-203ENST00000409641 ABCC8Q09428 1581 aa18.67■□□□□ 0.58
NAB1-203ENST00000409641 TOP2AP11388 1531 aaKnown RBP18.67■□□□□ 0.58
NAB1-203ENST00000409641 TNIKQ9UKE5 1360 aa18.66■□□□□ 0.58
NAB1-203ENST00000409641 SOGA1O94964 1423 aa18.63■□□□□ 0.57
NAB1-203ENST00000409641 BICRAQ9NZM4 1560 aa18.59■□□□□ 0.57
NAB1-203ENST00000409641 UBTFP17480 764 aaKnown RBP18.58■□□□□ 0.56
NAB1-203ENST00000409641 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
NAB1-203ENST00000409641 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
NAB1-203ENST00000409641 RUSC2Q8N2Y8 1516 aa18.53■□□□□ 0.56
NAB1-203ENST00000409641 SMARCA2P51531 1590 aa18.52■□□□□ 0.55
NAB1-203ENST00000409641 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
NAB1-203ENST00000409641 SUPT16HQ9Y5B9 1047 aaKnown RBP18.44■□□□□ 0.54
NAB1-203ENST00000409641 EEA1Q15075 1411 aa18.44■□□□□ 0.54
NAB1-203ENST00000409641 GOLGA3Q08378 1498 aa18.42■□□□□ 0.54
NAB1-203ENST00000409641 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
NAB1-203ENST00000409641 CLSPNQ9HAW4 1339 aa18.34■□□□□ 0.53
NAB1-203ENST00000409641 TSHZ2Q9NRE2 1034 aa18.33■□□□□ 0.52
NAB1-203ENST00000409641 CLIP1P30622 1438 aa18.28■□□□□ 0.52
NAB1-203ENST00000409641 VPS8Q8N3P4 1428 aa18.26■□□□□ 0.51
NAB1-203ENST00000409641 ANP32EQ9BTT0 268 aa18.26■□□□□ 0.51
NAB1-203ENST00000409641 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
NAB1-203ENST00000409641 ATAD2BQ9ULI0 1458 aa18.24■□□□□ 0.51
NAB1-203ENST00000409641 APLP2Q06481 763 aa18.23■□□□□ 0.51
NAB1-203ENST00000409641 DHX57Q6P158 1386 aaKnown RBP18.21■□□□□ 0.51
NAB1-203ENST00000409641 KIF21BO75037 1637 aa18.19■□□□□ 0.5
NAB1-203ENST00000409641 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
NAB1-203ENST00000409641 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
NAB1-203ENST00000409641 KCNH8Q96L42 1107 aa18.12■□□□□ 0.49
NAB1-203ENST00000409641 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
NAB1-203ENST00000409641 RAPGEF2Q9Y4G8 1499 aa18.11■□□□□ 0.49
NAB1-203ENST00000409641 BCL11AQ9H165 835 aa18.11■□□□□ 0.49
NAB1-203ENST00000409641 BCANQ96GW7 911 aa18.07■□□□□ 0.48
NAB1-203ENST00000409641 KANK4Q5T7N3 995 aaPredicted RBP18.01■□□□□ 0.47
NAB1-203ENST00000409641 HMGXB3Q12766 1538 aa18■□□□□ 0.47
NAB1-203ENST00000409641 FKBP8Q14318 412 aa17.98■□□□□ 0.47
NAB1-203ENST00000409641 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
NAB1-203ENST00000409641 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
NAB1-203ENST00000409641 RRBP1Q9P2E9 1410 aaKnown RBP17.92■□□□□ 0.46
NAB1-203ENST00000409641 RBM19Q9Y4C8 960 aaKnown RBP17.91■□□□□ 0.46
NAB1-203ENST00000409641 TOP2BQ02880 1626 aa17.9■□□□□ 0.46
NAB1-203ENST00000409641 CUX2O14529 1486 aa17.89■□□□□ 0.45
NAB1-203ENST00000409641 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
NAB1-203ENST00000409641 ITGAEP38570 1179 aa17.87■□□□□ 0.45
NAB1-203ENST00000409641 DDX10Q13206 875 aaKnown RBP17.86■□□□□ 0.45
NAB1-203ENST00000409641 CCNB3Q8WWL7 1395 aa17.84■□□□□ 0.45
NAB1-203ENST00000409641 MAPKBP1O60336 1514 aa17.81■□□□□ 0.44
NAB1-203ENST00000409641 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
NAB1-203ENST00000409641 PRXQ9BXM0 1461 aa17.79■□□□□ 0.44
NAB1-203ENST00000409641 NEFLP07196 543 aa17.79■□□□□ 0.44
NAB1-203ENST00000409641 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
NAB1-203ENST00000409641 TRIM52Q96A61 297 aa17.77■□□□□ 0.44
NAB1-203ENST00000409641 PPP1R15AO75807 674 aaPredicted RBP17.76■□□□□ 0.43
NAB1-203ENST00000409641 MSH5O43196 834 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms