RNA–Protein interactions for RNA: ENST00000624277.3

CCDC187-204, Transcript of coiled-coil domain containing 187, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC187, Length 3,918 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-204ENST00000624277 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
CCDC187-204ENST00000624277 DCAF8L2P0C7V8 631 aa23.09■■□□□ 1.29
CCDC187-204ENST00000624277 SUPT5HO00267 1087 aaKnown RBP22.65■■□□□ 1.22
CCDC187-204ENST00000624277 SHROOM4Q9ULL8 1493 aa22.55■■□□□ 1.2
CCDC187-204ENST00000624277 EHMT2Q96KQ7 1210 aa21.88■■□□□ 1.09
CCDC187-204ENST00000624277 PCGF6Q9BYE7 350 aa21.45■■□□□ 1.02
CCDC187-204ENST00000624277 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
CCDC187-204ENST00000624277 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.97
CCDC187-204ENST00000624277 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
CCDC187-204ENST00000624277 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
CCDC187-204ENST00000624277 PPARGC1BQ86YN6 1023 aaKnown RBP20.83■□□□□ 0.92
CCDC187-204ENST00000624277 CCDC180Q9P1Z9 1646 aa20.75■□□□□ 0.91
CCDC187-204ENST00000624277 CHIC1Q5VXU3 224 aa20.72■□□□□ 0.91
CCDC187-204ENST00000624277 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
CCDC187-204ENST00000624277 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.89
CCDC187-204ENST00000624277 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.89
CCDC187-204ENST00000624277 HRCP23327 699 aa20.55■□□□□ 0.88
CCDC187-204ENST00000624277 CCER1Q8TC90 406 aaPredicted RBP20.35■□□□□ 0.85
CCDC187-204ENST00000624277 TRIM26Q12899 539 aaPredicted RBP20.23■□□□□ 0.83
CCDC187-204ENST00000624277 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
CCDC187-204ENST00000624277 APLP2Q06481 763 aa20.14■□□□□ 0.81
CCDC187-204ENST00000624277 YTHDC1Q96MU7 727 aaKnown RBP20.14■□□□□ 0.81
CCDC187-204ENST00000624277 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
CCDC187-204ENST00000624277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
CCDC187-204ENST00000624277 ZEB1P37275 1124 aaPredicted RBP20.03■□□□□ 0.8
CCDC187-204ENST00000624277 ATP1B4Q9UN42 357 aaPredicted RBP19.85■□□□□ 0.77
CCDC187-204ENST00000624277 HNRNPUL2Q1KMD3 747 aaKnown RBP19.83■□□□□ 0.77
CCDC187-204ENST00000624277 CENPBP07199 599 aaPredicted RBP19.82■□□□□ 0.76
CCDC187-204ENST00000624277 ABCC9O60706 1549 aa19.75■□□□□ 0.75
CCDC187-204ENST00000624277 ITGAEP38570 1179 aa19.73■□□□□ 0.75
CCDC187-204ENST00000624277 PABPN1Q86U42 306 aaKnown RBP eCLIP19.59■□□□□ 0.73
CCDC187-204ENST00000624277 DIEXFQ68CQ4 756 aaKnown RBP19.55■□□□□ 0.72
CCDC187-204ENST00000624277 SCRIBQ14160 1630 aa19.52■□□□□ 0.72
CCDC187-204ENST00000624277 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
CCDC187-204ENST00000624277 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
CCDC187-204ENST00000624277 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
CCDC187-204ENST00000624277 GTF3C3Q9Y5Q9 886 aa19.39■□□□□ 0.69
CCDC187-204ENST00000624277 CNGB1Q14028 1251 aaPredicted RBP19.32■□□□□ 0.68
CCDC187-204ENST00000624277 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
CCDC187-204ENST00000624277 EIF4G1Q04637 1599 aaKnown RBP19.2■□□□□ 0.66
CCDC187-204ENST00000624277 MROH2BQ7Z745 1585 aa19.19■□□□□ 0.66
CCDC187-204ENST00000624277 WIZO95785 1651 aa19.17■□□□□ 0.66
CCDC187-204ENST00000624277 SCAF1Q9H7N4 1312 aaKnown RBP19.14■□□□□ 0.65
CCDC187-204ENST00000624277 NEUROD1Q13562 356 aa19.13■□□□□ 0.65
CCDC187-204ENST00000624277 ACIN1Q9UKV3 1341 aaKnown RBP19.11■□□□□ 0.65
CCDC187-204ENST00000624277 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
CCDC187-204ENST00000624277 BCANQ96GW7 911 aa19.1■□□□□ 0.65
CCDC187-204ENST00000624277 POLR3GLQ9BT43 218 aa19.06■□□□□ 0.64
CCDC187-204ENST00000624277 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
CCDC187-204ENST00000624277 NEFLP07196 543 aa19.04■□□□□ 0.64
CCDC187-204ENST00000624277 FAM50AQ14320 339 aaKnown RBP19.03■□□□□ 0.64
CCDC187-204ENST00000624277 P3H3Q8IVL6 736 aa19■□□□□ 0.63
CCDC187-204ENST00000624277 NACADO15069 1562 aa18.98■□□□□ 0.63
CCDC187-204ENST00000624277 ERICH6Q7L0X2 663 aa18.95■□□□□ 0.62
CCDC187-204ENST00000624277 BAZ1AQ9NRL2 1556 aaPredicted RBP18.94■□□□□ 0.62
CCDC187-204ENST00000624277 UNC13AQ9UPW8 1703 aa18.92■□□□□ 0.62
CCDC187-204ENST00000624277 ARID3CA6NKF2 412 aa18.85■□□□□ 0.61
CCDC187-204ENST00000624277 MIER1Q8N108 512 aa18.85■□□□□ 0.61
CCDC187-204ENST00000624277 HIRIP3Q9BW71 556 aaPredicted RBP18.78■□□□□ 0.6
CCDC187-204ENST00000624277 ABCC8Q09428 1581 aa18.77■□□□□ 0.59
CCDC187-204ENST00000624277 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
CCDC187-204ENST00000624277 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
CCDC187-204ENST00000624277 TRIM52Q96A61 297 aa18.69■□□□□ 0.58
CCDC187-204ENST00000624277 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
CCDC187-204ENST00000624277 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
CCDC187-204ENST00000624277 DDX10Q13206 875 aaKnown RBP18.66■□□□□ 0.58
CCDC187-204ENST00000624277 ZNF326Q5BKZ1 582 aaKnown RBP18.62■□□□□ 0.57
CCDC187-204ENST00000624277 RUSC2Q8N2Y8 1516 aa18.59■□□□□ 0.57
CCDC187-204ENST00000624277 CEP162Q5TB80 1403 aa18.58■□□□□ 0.57
CCDC187-204ENST00000624277 SOGA1O94964 1423 aa18.55■□□□□ 0.56
CCDC187-204ENST00000624277 FKBP8Q14318 412 aa18.52■□□□□ 0.55
CCDC187-204ENST00000624277 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
CCDC187-204ENST00000624277 ANP32CO43423 234 aa18.51■□□□□ 0.55
CCDC187-204ENST00000624277 SENP3-EIF4A1A0A087X0R7 540 aa18.49■□□□□ 0.55
CCDC187-204ENST00000624277 MYT1Q01538 1121 aa18.49■□□□□ 0.55
CCDC187-204ENST00000624277 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
CCDC187-204ENST00000624277 CLIP1P30622 1438 aa18.46■□□□□ 0.55
CCDC187-204ENST00000624277 CHIC2Q9UKJ5 165 aa18.44■□□□□ 0.54
CCDC187-204ENST00000624277 IRX6P78412 446 aaPredicted RBP18.43■□□□□ 0.54
CCDC187-204ENST00000624277 MYT1LQ9UL68 1186 aa18.43■□□□□ 0.54
CCDC187-204ENST00000624277 FBLN2P98095 1184 aa18.42■□□□□ 0.54
CCDC187-204ENST00000624277 SYNJ1O43426 1573 aa18.36■□□□□ 0.53
CCDC187-204ENST00000624277 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
CCDC187-204ENST00000624277 SIN3AQ96ST3 1273 aa18.35■□□□□ 0.53
CCDC187-204ENST00000624277 HNRNPUQ00839 825 aaKnown RBP eCLIP18.33■□□□□ 0.53
CCDC187-204ENST00000624277 ZNF777Q9ULD5 760 aaPredicted RBP18.32■□□□□ 0.52
CCDC187-204ENST00000624277 FAM9BQ8IZU0 186 aa18.3■□□□□ 0.52
CCDC187-204ENST00000624277 TNIKQ9UKE5 1360 aa18.29■□□□□ 0.52
CCDC187-204ENST00000624277 SALL2Q9Y467 1007 aaPredicted RBP18.28■□□□□ 0.52
CCDC187-204ENST00000624277 KANK4Q5T7N3 995 aaPredicted RBP18.27■□□□□ 0.51
CCDC187-204ENST00000624277 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
CCDC187-204ENST00000624277 GOLGA3Q08378 1498 aa18.23■□□□□ 0.51
CCDC187-204ENST00000624277 TONSLQ96HA7 1378 aa18.21■□□□□ 0.51
CCDC187-204ENST00000624277 RRP7BPQ9NSQ0 103 aa18.21■□□□□ 0.51
CCDC187-204ENST00000624277 CDK11AQ9UQ88 783 aaPredicted RBP18.2■□□□□ 0.5
CCDC187-204ENST00000624277 KIF21BO75037 1637 aa18.18■□□□□ 0.5
CCDC187-204ENST00000624277 KCNH8Q96L42 1107 aa18.14■□□□□ 0.49
CCDC187-204ENST00000624277 SUPT16HQ9Y5B9 1047 aaKnown RBP18.09■□□□□ 0.49
CCDC187-204ENST00000624277 EEA1Q15075 1411 aa18.09■□□□□ 0.49
CCDC187-204ENST00000624277 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms