RNA–Protein interactions for RNA: ENST00000490841.6

ABI1-212, Transcript of abl interactor 1, humanhuman

TSL 2 BASIC

Gene ABI1, Length 3,188 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABI1-212ENST00000490841 NISCHQ9Y2I1 1504 aa25.86■■□□□ 1.73
ABI1-212ENST00000490841 SHROOM4Q9ULL8 1493 aa23.18■■□□□ 1.3
ABI1-212ENST00000490841 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
ABI1-212ENST00000490841 SUPT5HO00267 1087 aaKnown RBP22.76■■□□□ 1.23
ABI1-212ENST00000490841 ZCCHC6Q5VYS8 1495 aaKnown RBP21.73■■□□□ 1.07
ABI1-212ENST00000490841 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
ABI1-212ENST00000490841 EHMT2Q96KQ7 1210 aa21.49■■□□□ 1.03
ABI1-212ENST00000490841 CCDC180Q9P1Z9 1646 aa21.48■■□□□ 1.03
ABI1-212ENST00000490841 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
ABI1-212ENST00000490841 MYO15BQ96JP2 1530 aa21.31■■□□□ 1
ABI1-212ENST00000490841 PCGF6Q9BYE7 350 aa21.27■■□□□ 1
ABI1-212ENST00000490841 FAM9AQ8IZU1 332 aaPredicted RBP21.23■□□□□ 0.99
ABI1-212ENST00000490841 HRCP23327 699 aa21.18■□□□□ 0.98
ABI1-212ENST00000490841 ABCC9O60706 1549 aa21.11■□□□□ 0.97
ABI1-212ENST00000490841 SCRIBQ14160 1630 aa20.98■□□□□ 0.95
ABI1-212ENST00000490841 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
ABI1-212ENST00000490841 TRIM41Q8WV44 630 aa20.88■□□□□ 0.93
ABI1-212ENST00000490841 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
ABI1-212ENST00000490841 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
ABI1-212ENST00000490841 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
ABI1-212ENST00000490841 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
ABI1-212ENST00000490841 PABPN1Q86U42 306 aaKnown RBP eCLIP20.56■□□□□ 0.88
ABI1-212ENST00000490841 RB1CC1Q8TDY2 1594 aa20.44■□□□□ 0.86
ABI1-212ENST00000490841 TRIM26Q12899 539 aaPredicted RBP20.39■□□□□ 0.85
ABI1-212ENST00000490841 MROH2BQ7Z745 1585 aa20.32■□□□□ 0.84
ABI1-212ENST00000490841 RANGAP1P46060 587 aaPredicted RBP20.28■□□□□ 0.84
ABI1-212ENST00000490841 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
ABI1-212ENST00000490841 WIZO95785 1651 aa20.19■□□□□ 0.82
ABI1-212ENST00000490841 NACADO15069 1562 aa20.15■□□□□ 0.82
ABI1-212ENST00000490841 UBTFP17480 764 aaKnown RBP20.09■□□□□ 0.81
ABI1-212ENST00000490841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
ABI1-212ENST00000490841 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
ABI1-212ENST00000490841 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
ABI1-212ENST00000490841 ZEB1P37275 1124 aaPredicted RBP19.94■□□□□ 0.78
ABI1-212ENST00000490841 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
ABI1-212ENST00000490841 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
ABI1-212ENST00000490841 SOGA1O94964 1423 aa19.82■□□□□ 0.76
ABI1-212ENST00000490841 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
ABI1-212ENST00000490841 MYT1Q01538 1121 aa19.81■□□□□ 0.76
ABI1-212ENST00000490841 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
ABI1-212ENST00000490841 RUSC2Q8N2Y8 1516 aa19.74■□□□□ 0.75
ABI1-212ENST00000490841 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
ABI1-212ENST00000490841 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
ABI1-212ENST00000490841 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
ABI1-212ENST00000490841 CEP162Q5TB80 1403 aa19.57■□□□□ 0.72
ABI1-212ENST00000490841 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
ABI1-212ENST00000490841 APLP2Q06481 763 aa19.54■□□□□ 0.72
ABI1-212ENST00000490841 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
ABI1-212ENST00000490841 NEUROD1Q13562 356 aa19.52■□□□□ 0.72
ABI1-212ENST00000490841 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
ABI1-212ENST00000490841 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
ABI1-212ENST00000490841 ITGAEP38570 1179 aa19.44■□□□□ 0.7
ABI1-212ENST00000490841 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
ABI1-212ENST00000490841 YTHDC1Q96MU7 727 aaKnown RBP19.41■□□□□ 0.7
ABI1-212ENST00000490841 BAZ1BQ9UIG0 1483 aaKnown RBP19.4■□□□□ 0.7
ABI1-212ENST00000490841 GTF3C3Q9Y5Q9 886 aa19.4■□□□□ 0.7
ABI1-212ENST00000490841 ATP1B4Q9UN42 357 aaPredicted RBP19.39■□□□□ 0.69
ABI1-212ENST00000490841 TNIKQ9UKE5 1360 aa19.35■□□□□ 0.69
ABI1-212ENST00000490841 DIEXFQ68CQ4 756 aaKnown RBP19.35■□□□□ 0.69
ABI1-212ENST00000490841 EIF4G1Q04637 1599 aaKnown RBP19.34■□□□□ 0.69
ABI1-212ENST00000490841 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.69
ABI1-212ENST00000490841 CLIP1P30622 1438 aa19.27■□□□□ 0.68
ABI1-212ENST00000490841 GOLGA3Q08378 1498 aa19.27■□□□□ 0.68
ABI1-212ENST00000490841 CENPBP07199 599 aaPredicted RBP19.27■□□□□ 0.67
ABI1-212ENST00000490841 P3H3Q8IVL6 736 aa19.26■□□□□ 0.67
ABI1-212ENST00000490841 SYNJ1O43426 1573 aa19.25■□□□□ 0.67
ABI1-212ENST00000490841 RAPGEF2Q9Y4G8 1499 aa19.23■□□□□ 0.67
ABI1-212ENST00000490841 KANK4Q5T7N3 995 aaPredicted RBP19.14■□□□□ 0.66
ABI1-212ENST00000490841 EEA1Q15075 1411 aa19.13■□□□□ 0.65
ABI1-212ENST00000490841 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
ABI1-212ENST00000490841 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
ABI1-212ENST00000490841 MIER1Q8N108 512 aa18.98■□□□□ 0.63
ABI1-212ENST00000490841 VPS8Q8N3P4 1428 aa18.97■□□□□ 0.63
ABI1-212ENST00000490841 FAM50AQ14320 339 aaKnown RBP18.97■□□□□ 0.63
ABI1-212ENST00000490841 ARID3CA6NKF2 412 aa18.93■□□□□ 0.62
ABI1-212ENST00000490841 PEG3Q9GZU2 1588 aa18.9■□□□□ 0.62
ABI1-212ENST00000490841 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.62
ABI1-212ENST00000490841 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
ABI1-212ENST00000490841 KIF21BO75037 1637 aa18.87■□□□□ 0.61
ABI1-212ENST00000490841 CUX2O14529 1486 aa18.87■□□□□ 0.61
ABI1-212ENST00000490841 CUX1P39880 1505 aa18.85■□□□□ 0.61
ABI1-212ENST00000490841 HIRIP3Q9BW71 556 aaPredicted RBP18.82■□□□□ 0.6
ABI1-212ENST00000490841 ARAP1Q96P48 1450 aa18.8■□□□□ 0.6
ABI1-212ENST00000490841 NCAPD3P42695 1498 aa18.79■□□□□ 0.6
ABI1-212ENST00000490841 TOP2BQ02880 1626 aa18.79■□□□□ 0.6
ABI1-212ENST00000490841 CARMIL1Q5VZK9 1371 aa18.73■□□□□ 0.59
ABI1-212ENST00000490841 IGF1RP08069 1367 aa18.72■□□□□ 0.59
ABI1-212ENST00000490841 SIN3AQ96ST3 1273 aa18.71■□□□□ 0.59
ABI1-212ENST00000490841 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
ABI1-212ENST00000490841 PRXQ9BXM0 1461 aa18.71■□□□□ 0.59
ABI1-212ENST00000490841 NESP48681 1621 aa18.7■□□□□ 0.58
ABI1-212ENST00000490841 CFTRP13569 1480 aa18.7■□□□□ 0.58
ABI1-212ENST00000490841 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
ABI1-212ENST00000490841 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
ABI1-212ENST00000490841 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
ABI1-212ENST00000490841 DHX57Q6P158 1386 aaKnown RBP18.64■□□□□ 0.57
ABI1-212ENST00000490841 ARHGAP35Q9NRY4 1499 aa18.63■□□□□ 0.57
ABI1-212ENST00000490841 CCNB3Q8WWL7 1395 aa18.63■□□□□ 0.57
ABI1-212ENST00000490841 FHOD3Q2V2M9 1422 aa18.6■□□□□ 0.57
ABI1-212ENST00000490841 CHIC2Q9UKJ5 165 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms