RNA–Protein interactions for RNA: ENST00000590523.1

LINC00662-206, long intergenic non-protein coding RNA 662, humanhuman

TSL 1 (best) BASIC

Gene LINC00662, Length 2,053 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-206ENST00000590523 NISCHQ9Y2I1 1504 aa26.21■■□□□ 1.79
LINC00662-206ENST00000590523 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
LINC00662-206ENST00000590523 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
LINC00662-206ENST00000590523 SHROOM4Q9ULL8 1493 aa22.1■■□□□ 1.13
LINC00662-206ENST00000590523 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
LINC00662-206ENST00000590523 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
LINC00662-206ENST00000590523 DCAF1Q9Y4B6 1507 aa21.67■■□□□ 1.06
LINC00662-206ENST00000590523 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.01
LINC00662-206ENST00000590523 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
LINC00662-206ENST00000590523 ABCC9O60706 1549 aa21.26■□□□□ 0.99
LINC00662-206ENST00000590523 MYO15BQ96JP2 1530 aa21.2■□□□□ 0.98
LINC00662-206ENST00000590523 HRCP23327 699 aa20.95■□□□□ 0.94
LINC00662-206ENST00000590523 SCRIBQ14160 1630 aa20.76■□□□□ 0.91
LINC00662-206ENST00000590523 NACADO15069 1562 aa20.75■□□□□ 0.91
LINC00662-206ENST00000590523 RSF1Q96T23 1441 aaPredicted RBP20.72■□□□□ 0.91
LINC00662-206ENST00000590523 PCGF6Q9BYE7 350 aa20.68■□□□□ 0.9
LINC00662-206ENST00000590523 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
LINC00662-206ENST00000590523 LOC105371045A0A1W2PR82 267 aa20.55■□□□□ 0.88
LINC00662-206ENST00000590523 TRIM26Q12899 539 aaPredicted RBP20.45■□□□□ 0.86
LINC00662-206ENST00000590523 PELP1Q8IZL8 1130 aaKnown RBP20.44■□□□□ 0.86
LINC00662-206ENST00000590523 TRIM41Q8WV44 630 aa20.4■□□□□ 0.86
LINC00662-206ENST00000590523 MROH2BQ7Z745 1585 aa20.28■□□□□ 0.84
LINC00662-206ENST00000590523 CECR2Q9BXF3 1484 aa20.28■□□□□ 0.84
LINC00662-206ENST00000590523 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
LINC00662-206ENST00000590523 PPARGC1BQ86YN6 1023 aaKnown RBP20.19■□□□□ 0.82
LINC00662-206ENST00000590523 ZEB1P37275 1124 aaPredicted RBP20.18■□□□□ 0.82
LINC00662-206ENST00000590523 WIZO95785 1651 aa20.18■□□□□ 0.82
LINC00662-206ENST00000590523 UNC13AQ9UPW8 1703 aa20.13■□□□□ 0.81
LINC00662-206ENST00000590523 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
LINC00662-206ENST00000590523 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
LINC00662-206ENST00000590523 FAM9AQ8IZU1 332 aaPredicted RBP20.04■□□□□ 0.8
LINC00662-206ENST00000590523 TOP2AP11388 1531 aaKnown RBP19.99■□□□□ 0.79
LINC00662-206ENST00000590523 BICRAQ9NZM4 1560 aa19.97■□□□□ 0.79
LINC00662-206ENST00000590523 SMARCA4P51532 1647 aa19.95■□□□□ 0.78
LINC00662-206ENST00000590523 SMARCA2P51531 1590 aa19.83■□□□□ 0.77
LINC00662-206ENST00000590523 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
LINC00662-206ENST00000590523 MYT1Q01538 1121 aa19.77■□□□□ 0.75
LINC00662-206ENST00000590523 EEA1Q15075 1411 aa19.74■□□□□ 0.75
LINC00662-206ENST00000590523 EHMT2Q96KQ7 1210 aa19.72■□□□□ 0.75
LINC00662-206ENST00000590523 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
LINC00662-206ENST00000590523 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
LINC00662-206ENST00000590523 PEG3Q9GZU2 1588 aa19.65■□□□□ 0.74
LINC00662-206ENST00000590523 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.73
LINC00662-206ENST00000590523 TNIKQ9UKE5 1360 aa19.63■□□□□ 0.73
LINC00662-206ENST00000590523 CEP162Q5TB80 1403 aa19.59■□□□□ 0.73
LINC00662-206ENST00000590523 SOGA1O94964 1423 aa19.54■□□□□ 0.72
LINC00662-206ENST00000590523 CSRNP3Q8WYN3 585 aa19.53■□□□□ 0.72
LINC00662-206ENST00000590523 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
LINC00662-206ENST00000590523 CCER1Q8TC90 406 aaPredicted RBP19.49■□□□□ 0.71
LINC00662-206ENST00000590523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.42■□□□□ 0.7
LINC00662-206ENST00000590523 KIF21BO75037 1637 aa19.41■□□□□ 0.7
LINC00662-206ENST00000590523 CEP164Q9UPV0 1460 aa19.4■□□□□ 0.7
LINC00662-206ENST00000590523 RUSC2Q8N2Y8 1516 aa19.39■□□□□ 0.7
LINC00662-206ENST00000590523 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.69
LINC00662-206ENST00000590523 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
LINC00662-206ENST00000590523 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
LINC00662-206ENST00000590523 SYNJ1O43426 1573 aa19.34■□□□□ 0.69
LINC00662-206ENST00000590523 BAZ1BQ9UIG0 1483 aaKnown RBP19.34■□□□□ 0.69
LINC00662-206ENST00000590523 ACIN1Q9UKV3 1341 aaKnown RBP19.31■□□□□ 0.68
LINC00662-206ENST00000590523 CLIP1P30622 1438 aa19.23■□□□□ 0.67
LINC00662-206ENST00000590523 TOP2BQ02880 1626 aa19.2■□□□□ 0.66
LINC00662-206ENST00000590523 VPS8Q8N3P4 1428 aa19.2■□□□□ 0.66
LINC00662-206ENST00000590523 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
LINC00662-206ENST00000590523 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
LINC00662-206ENST00000590523 CENPBP07199 599 aaPredicted RBP19.17■□□□□ 0.66
LINC00662-206ENST00000590523 DIEXFQ68CQ4 756 aaKnown RBP19.17■□□□□ 0.66
LINC00662-206ENST00000590523 BIVM-ERCC5R4GMW8 1640 aa19.16■□□□□ 0.66
LINC00662-206ENST00000590523 TTBK1Q5TCY1 1321 aaPredicted RBP19.16■□□□□ 0.66
LINC00662-206ENST00000590523 NEUROD1Q13562 356 aa19.11■□□□□ 0.65
LINC00662-206ENST00000590523 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
LINC00662-206ENST00000590523 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
LINC00662-206ENST00000590523 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
LINC00662-206ENST00000590523 APLP2Q06481 763 aa19.09■□□□□ 0.65
LINC00662-206ENST00000590523 ZNF316A6NFI3 1004 aaPredicted RBP19.06■□□□□ 0.64
LINC00662-206ENST00000590523 GTF3C3Q9Y5Q9 886 aa19.02■□□□□ 0.63
LINC00662-206ENST00000590523 PRXQ9BXM0 1461 aa19.01■□□□□ 0.63
LINC00662-206ENST00000590523 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
LINC00662-206ENST00000590523 CLSPNQ9HAW4 1339 aa18.93■□□□□ 0.62
LINC00662-206ENST00000590523 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
LINC00662-206ENST00000590523 CUX1P39880 1505 aa18.91■□□□□ 0.62
LINC00662-206ENST00000590523 CFTRP13569 1480 aa18.89■□□□□ 0.61
LINC00662-206ENST00000590523 ARAP1Q96P48 1450 aa18.89■□□□□ 0.61
LINC00662-206ENST00000590523 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
LINC00662-206ENST00000590523 RRBP1Q9P2E9 1410 aaKnown RBP18.78■□□□□ 0.6
LINC00662-206ENST00000590523 RANGAP1P46060 587 aaPredicted RBP18.76■□□□□ 0.59
LINC00662-206ENST00000590523 CUX2O14529 1486 aa18.73■□□□□ 0.59
LINC00662-206ENST00000590523 DHX57Q6P158 1386 aaKnown RBP18.72■□□□□ 0.59
LINC00662-206ENST00000590523 CADPSQ9ULU8 1353 aa18.72■□□□□ 0.59
LINC00662-206ENST00000590523 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
LINC00662-206ENST00000590523 MAP3K1Q13233 1512 aa18.7■□□□□ 0.58
LINC00662-206ENST00000590523 MIER1Q8N108 512 aa18.68■□□□□ 0.58
LINC00662-206ENST00000590523 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
LINC00662-206ENST00000590523 CCNB3Q8WWL7 1395 aa18.65■□□□□ 0.58
LINC00662-206ENST00000590523 IGF1RP08069 1367 aa18.62■□□□□ 0.57
LINC00662-206ENST00000590523 NESP48681 1621 aa18.6■□□□□ 0.57
LINC00662-206ENST00000590523 TIAM1Q13009 1591 aa18.59■□□□□ 0.57
LINC00662-206ENST00000590523 YTHDC1Q96MU7 727 aaKnown RBP18.57■□□□□ 0.56
LINC00662-206ENST00000590523 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
LINC00662-206ENST00000590523 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
LINC00662-206ENST00000590523 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms