Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.96□□□□□ -0.17
CASP3P42574 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP3P42574 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP3P42574 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
CASP3P42574 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP3P42574 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP3P42574 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP3P42574 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.96□□□□□ -0.17
CASP3P42574 ARSEP1-201ENST00000420443 635 ntBASIC13.96□□□□□ -0.17
CASP3P42574 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP3P42574 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.96□□□□□ -0.17
CASP3P42574 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.96□□□□□ -0.17
CASP3P42574 FTH1P14-201ENST00000482930 551 ntBASIC13.96□□□□□ -0.17
CASP3P42574 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.96□□□□□ -0.17
CASP3P42574 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.96□□□□□ -0.17
CASP3P42574 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CASP3P42574 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CASP3P42574 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.96□□□□□ -0.17
CASP3P42574 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.96□□□□□ -0.17
CASP3P42574 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CASP3P42574 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP3P42574 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CASP3P42574 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CASP3P42574 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP3P42574 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP3P42574 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.96□□□□□ -0.17
CASP3P42574 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CASP3P42574 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.96□□□□□ -0.17
CASP3P42574 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.96□□□□□ -0.17
CASP3P42574 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CASP3P42574 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CASP3P42574 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CASP3P42574 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.96□□□□□ -0.18
CASP3P42574 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.96□□□□□ -0.18
CASP3P42574 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CASP3P42574 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CASP3P42574 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CASP3P42574 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.95□□□□□ -0.18
CASP3P42574 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CASP3P42574 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 AC092135.3-201ENST00000624151 1846 ntBASIC13.95□□□□□ -0.18
CASP3P42574 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.95□□□□□ -0.18
CASP3P42574 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CASP3P42574 HLA-K-203ENST00000430151 1046 ntBASIC13.95□□□□□ -0.18
CASP3P42574 AC016694.1-201ENST00000434179 700 ntBASIC13.95□□□□□ -0.18
CASP3P42574 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CASP3P42574 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.95□□□□□ -0.18
CASP3P42574 AC007551.1-201ENST00000457394 519 ntBASIC13.95□□□□□ -0.18
CASP3P42574 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CASP3P42574 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CASP3P42574 GNRHR2-203ENST00000581100 1187 ntBASIC13.95□□□□□ -0.18
CASP3P42574 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 AC017083.2-201ENST00000608069 979 ntBASIC13.95□□□□□ -0.18
CASP3P42574 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CASP3P42574 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CASP3P42574 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CASP3P42574 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CASP3P42574 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CASP3P42574 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 AL359881.3-201ENST00000602640 1721 ntBASIC13.95□□□□□ -0.18
CASP3P42574 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CASP3P42574 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CASP3P42574 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CASP3P42574 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms