RNA–Protein interactions for RNA: ENST00000532125.1

FOXRED1-213, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FOXRED1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-213ENST00000532125 NISCHQ9Y2I1 1504 aa34.26■■■■□ 3.07
FOXRED1-213ENST00000532125 CCDC180Q9P1Z9 1646 aa29.75■■■□□ 2.35
FOXRED1-213ENST00000532125 ZCCHC6Q5VYS8 1495 aaKnown RBP28.82■■■□□ 2.2
FOXRED1-213ENST00000532125 DCAF1Q9Y4B6 1507 aa28.37■■■□□ 2.13
FOXRED1-213ENST00000532125 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.1
FOXRED1-213ENST00000532125 SHROOM4Q9ULL8 1493 aa28.03■■■□□ 2.08
FOXRED1-213ENST00000532125 MYO15BQ96JP2 1530 aa27.96■■■□□ 2.07
FOXRED1-213ENST00000532125 ABCC9O60706 1549 aa27.84■■■□□ 2.05
FOXRED1-213ENST00000532125 NACADO15069 1562 aa27.66■■■□□ 2.02
FOXRED1-213ENST00000532125 RB1CC1Q8TDY2 1594 aa27.34■■□□□ 1.97
FOXRED1-213ENST00000532125 SCRIBQ14160 1630 aa27.33■■□□□ 1.97
FOXRED1-213ENST00000532125 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
FOXRED1-213ENST00000532125 UNC13AQ9UPW8 1703 aa26.78■■□□□ 1.88
FOXRED1-213ENST00000532125 RSF1Q96T23 1441 aaPredicted RBP26.67■■□□□ 1.86
FOXRED1-213ENST00000532125 CECR2Q9BXF3 1484 aa26.57■■□□□ 1.84
FOXRED1-213ENST00000532125 BICRAQ9NZM4 1560 aa26.51■■□□□ 1.83
FOXRED1-213ENST00000532125 MROH2BQ7Z745 1585 aa26.45■■□□□ 1.82
FOXRED1-213ENST00000532125 BAZ1AQ9NRL2 1556 aaPredicted RBP26.43■■□□□ 1.82
FOXRED1-213ENST00000532125 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
FOXRED1-213ENST00000532125 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
FOXRED1-213ENST00000532125 WIZO95785 1651 aa26.24■■□□□ 1.79
FOXRED1-213ENST00000532125 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
FOXRED1-213ENST00000532125 TOP2AP11388 1531 aaKnown RBP25.99■■□□□ 1.75
FOXRED1-213ENST00000532125 PEG3Q9GZU2 1588 aa25.97■■□□□ 1.75
FOXRED1-213ENST00000532125 SMARCA2P51531 1590 aa25.78■■□□□ 1.72
FOXRED1-213ENST00000532125 ATAD2BQ9ULI0 1458 aa25.77■■□□□ 1.72
FOXRED1-213ENST00000532125 CCDC88BA6NC98 1476 aa25.74■■□□□ 1.71
FOXRED1-213ENST00000532125 EIF4G1Q04637 1599 aaKnown RBP25.68■■□□□ 1.7
FOXRED1-213ENST00000532125 BAZ1BQ9UIG0 1483 aaKnown RBP25.63■■□□□ 1.69
FOXRED1-213ENST00000532125 NCAPD3P42695 1498 aa25.54■■□□□ 1.68
FOXRED1-213ENST00000532125 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
FOXRED1-213ENST00000532125 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
FOXRED1-213ENST00000532125 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
FOXRED1-213ENST00000532125 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
FOXRED1-213ENST00000532125 LOC105371045A0A1W2PR82 267 aa25.14■■□□□ 1.61
FOXRED1-213ENST00000532125 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
FOXRED1-213ENST00000532125 CFTRP13569 1480 aa25.04■■□□□ 1.6
FOXRED1-213ENST00000532125 FAM9AQ8IZU1 332 aaPredicted RBP25.01■■□□□ 1.59
FOXRED1-213ENST00000532125 DNAJC5BQ9UF47 199 aa24.96■■□□□ 1.59
FOXRED1-213ENST00000532125 SYNJ1O43426 1573 aa24.95■■□□□ 1.58
FOXRED1-213ENST00000532125 EEA1Q15075 1411 aa24.91■■□□□ 1.58
FOXRED1-213ENST00000532125 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
FOXRED1-213ENST00000532125 PRDM2Q13029 1718 aa24.89■■□□□ 1.58
FOXRED1-213ENST00000532125 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
FOXRED1-213ENST00000532125 SOGA1O94964 1423 aa24.84■■□□□ 1.57
FOXRED1-213ENST00000532125 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.57
FOXRED1-213ENST00000532125 CSRNP3Q8WYN3 585 aa24.73■■□□□ 1.55
FOXRED1-213ENST00000532125 RUSC2Q8N2Y8 1516 aa24.73■■□□□ 1.55
FOXRED1-213ENST00000532125 CUX1P39880 1505 aa24.71■■□□□ 1.55
FOXRED1-213ENST00000532125 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
FOXRED1-213ENST00000532125 EHMT2Q96KQ7 1210 aa24.6■■□□□ 1.53
FOXRED1-213ENST00000532125 FANCD2Q9BXW9 1451 aa24.58■■□□□ 1.53
FOXRED1-213ENST00000532125 TNIKQ9UKE5 1360 aa24.54■■□□□ 1.52
FOXRED1-213ENST00000532125 GOLGA3Q08378 1498 aa24.54■■□□□ 1.52
FOXRED1-213ENST00000532125 KIF21BO75037 1637 aa24.54■■□□□ 1.52
FOXRED1-213ENST00000532125 NESP48681 1621 aa24.53■■□□□ 1.52
FOXRED1-213ENST00000532125 CEP164Q9UPV0 1460 aa24.52■■□□□ 1.52
FOXRED1-213ENST00000532125 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
FOXRED1-213ENST00000532125 DNMBPQ6XZF7 1577 aa24.43■■□□□ 1.5
FOXRED1-213ENST00000532125 PDS5BQ9NTI5 1447 aa24.42■■□□□ 1.5
FOXRED1-213ENST00000532125 FGD5Q6ZNL6 1462 aa24.4■■□□□ 1.5
FOXRED1-213ENST00000532125 UBTFP17480 764 aaKnown RBP24.4■■□□□ 1.5
FOXRED1-213ENST00000532125 CEP162Q5TB80 1403 aa24.38■■□□□ 1.49
FOXRED1-213ENST00000532125 TOPBP1Q92547 1522 aa24.36■■□□□ 1.49
FOXRED1-213ENST00000532125 PRXQ9BXM0 1461 aa24.36■■□□□ 1.49
FOXRED1-213ENST00000532125 ERICH3Q5RHP9 1530 aa24.34■■□□□ 1.49
FOXRED1-213ENST00000532125 RAPGEF2Q9Y4G8 1499 aa24.33■■□□□ 1.48
FOXRED1-213ENST00000532125 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
FOXRED1-213ENST00000532125 HRCP23327 699 aa24.29■■□□□ 1.48
FOXRED1-213ENST00000532125 CUX2O14529 1486 aa24.29■■□□□ 1.48
FOXRED1-213ENST00000532125 URB2Q14146 1524 aaKnown RBP24.26■■□□□ 1.47
FOXRED1-213ENST00000532125 POLA1P09884 1462 aaPredicted RBP24.25■■□□□ 1.47
FOXRED1-213ENST00000532125 TRIM26Q12899 539 aaPredicted RBP24.25■■□□□ 1.47
FOXRED1-213ENST00000532125 KIF21AQ7Z4S6 1674 aa24.24■■□□□ 1.47
FOXRED1-213ENST00000532125 ABCA10Q8WWZ4 1543 aa24.23■■□□□ 1.47
FOXRED1-213ENST00000532125 IGF1RP08069 1367 aa24.21■■□□□ 1.47
FOXRED1-213ENST00000532125 RAD54L2Q9Y4B4 1467 aa24.16■■□□□ 1.46
FOXRED1-213ENST00000532125 CLIP1P30622 1438 aa24.14■■□□□ 1.46
FOXRED1-213ENST00000532125 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
FOXRED1-213ENST00000532125 CARMIL1Q5VZK9 1371 aa24.08■■□□□ 1.45
FOXRED1-213ENST00000532125 MRC2Q9UBG0 1479 aa24.06■■□□□ 1.44
FOXRED1-213ENST00000532125 VPS8Q8N3P4 1428 aa23.98■■□□□ 1.43
FOXRED1-213ENST00000532125 CUL7Q14999 1698 aa23.98■■□□□ 1.43
FOXRED1-213ENST00000532125 ABCA5Q8WWZ7 1642 aa23.98■■□□□ 1.43
FOXRED1-213ENST00000532125 TARBP1Q13395 1621 aaKnown RBP23.98■■□□□ 1.43
FOXRED1-213ENST00000532125 WDR62O43379 1518 aa23.94■■□□□ 1.42
FOXRED1-213ENST00000532125 GAPVD1Q14C86 1478 aa23.93■■□□□ 1.42
FOXRED1-213ENST00000532125 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
FOXRED1-213ENST00000532125 PPARGC1BQ86YN6 1023 aaKnown RBP23.88■■□□□ 1.41
FOXRED1-213ENST00000532125 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
FOXRED1-213ENST00000532125 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
FOXRED1-213ENST00000532125 ERCC6Q03468 1493 aa23.85■■□□□ 1.41
FOXRED1-213ENST00000532125 IFT140Q96RY7 1462 aa23.83■■□□□ 1.41
FOXRED1-213ENST00000532125 ARHGAP35Q9NRY4 1499 aa23.83■■□□□ 1.41
FOXRED1-213ENST00000532125 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
FOXRED1-213ENST00000532125 APLP2Q06481 763 aa23.75■■□□□ 1.39
FOXRED1-213ENST00000532125 PBRM1Q86U86 1689 aa23.74■■□□□ 1.39
FOXRED1-213ENST00000532125 CTTNBP2Q8WZ74 1663 aa23.73■■□□□ 1.39
FOXRED1-213ENST00000532125 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.392e-10■■■■■ 41.8
FOXRED1-213ENST00000532125 GRIN2BQ13224 1484 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms