RNA–Protein interactions for RNA: ENST00000534749.5

PITPNM1-216, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITPNM1, Length 4,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-216ENST00000534749 NISCHQ9Y2I1 1504 aa26.67■■□□□ 1.86
PITPNM1-216ENST00000534749 DCAF8L2P0C7V8 631 aa26.29■■□□□ 1.8
PITPNM1-216ENST00000534749 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
PITPNM1-216ENST00000534749 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
PITPNM1-216ENST00000534749 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
PITPNM1-216ENST00000534749 PCGF6Q9BYE7 350 aa24.13■■□□□ 1.45
PITPNM1-216ENST00000534749 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.45
PITPNM1-216ENST00000534749 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
PITPNM1-216ENST00000534749 TRIM41Q8WV44 630 aa23.52■■□□□ 1.36
PITPNM1-216ENST00000534749 LOC105371045A0A1W2PR82 267 aa23.42■■□□□ 1.34
PITPNM1-216ENST00000534749 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
PITPNM1-216ENST00000534749 PPARGC1BQ86YN6 1023 aaKnown RBP23.36■■□□□ 1.33
PITPNM1-216ENST00000534749 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
PITPNM1-216ENST00000534749 HRCP23327 699 aa23.12■■□□□ 1.29
PITPNM1-216ENST00000534749 APLP2Q06481 763 aa23.12■■□□□ 1.29
PITPNM1-216ENST00000534749 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.29
PITPNM1-216ENST00000534749 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
PITPNM1-216ENST00000534749 TRIM26Q12899 539 aaPredicted RBP22.95■■□□□ 1.26
PITPNM1-216ENST00000534749 ZEB1P37275 1124 aaPredicted RBP22.89■■□□□ 1.26
PITPNM1-216ENST00000534749 CCDC180Q9P1Z9 1646 aa22.67■■□□□ 1.22
PITPNM1-216ENST00000534749 YTHDC1Q96MU7 727 aaKnown RBP22.66■■□□□ 1.22
PITPNM1-216ENST00000534749 ATP1B4Q9UN42 357 aaPredicted RBP22.62■■□□□ 1.21
PITPNM1-216ENST00000534749 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
PITPNM1-216ENST00000534749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.53■■□□□ 1.2
PITPNM1-216ENST00000534749 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
PITPNM1-216ENST00000534749 ABCC9O60706 1549 aa22.41■■□□□ 1.18
PITPNM1-216ENST00000534749 ZCCHC6Q5VYS8 1495 aaKnown RBP22.36■■□□□ 1.17
PITPNM1-216ENST00000534749 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
PITPNM1-216ENST00000534749 ITGAEP38570 1179 aa22.35■■□□□ 1.17
PITPNM1-216ENST00000534749 PABPN1Q86U42 306 aaKnown RBP eCLIP22.31■■□□□ 1.16
PITPNM1-216ENST00000534749 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
PITPNM1-216ENST00000534749 DIEXFQ68CQ4 756 aaKnown RBP22.08■■□□□ 1.13
PITPNM1-216ENST00000534749 SCRIBQ14160 1630 aa21.86■■□□□ 1.09
PITPNM1-216ENST00000534749 CNGB1Q14028 1251 aaPredicted RBP21.77■■□□□ 1.08
PITPNM1-216ENST00000534749 GTF3C3Q9Y5Q9 886 aa21.77■■□□□ 1.08
PITPNM1-216ENST00000534749 CSRNP3Q8WYN3 585 aa21.77■■□□□ 1.08
PITPNM1-216ENST00000534749 NEFLP07196 543 aa21.75■■□□□ 1.07
PITPNM1-216ENST00000534749 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
PITPNM1-216ENST00000534749 FAM50AQ14320 339 aaKnown RBP21.67■■□□□ 1.06
PITPNM1-216ENST00000534749 POLR3GLQ9BT43 218 aa21.65■■□□□ 1.06
PITPNM1-216ENST00000534749 NEUROD1Q13562 356 aa21.63■■□□□ 1.05
PITPNM1-216ENST00000534749 ERICH6Q7L0X2 663 aa21.62■■□□□ 1.05
PITPNM1-216ENST00000534749 ZNF316A6NFI3 1004 aaPredicted RBP21.59■■□□□ 1.05
PITPNM1-216ENST00000534749 P3H3Q8IVL6 736 aa21.55■■□□□ 1.04
PITPNM1-216ENST00000534749 RSF1Q96T23 1441 aaPredicted RBP21.55■■□□□ 1.04
PITPNM1-216ENST00000534749 ACIN1Q9UKV3 1341 aaKnown RBP21.52■■□□□ 1.04
PITPNM1-216ENST00000534749 BCANQ96GW7 911 aa21.45■■□□□ 1.02
PITPNM1-216ENST00000534749 ARID3CA6NKF2 412 aa21.34■■□□□ 1.01
PITPNM1-216ENST00000534749 SCAF1Q9H7N4 1312 aaKnown RBP21.34■■□□□ 1.01
PITPNM1-216ENST00000534749 TRIM52Q96A61 297 aa21.33■■□□□ 1.01
PITPNM1-216ENST00000534749 NACADO15069 1562 aa21.29■■□□□ 1
PITPNM1-216ENST00000534749 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
PITPNM1-216ENST00000534749 MIER1Q8N108 512 aa21.18■□□□□ 0.98
PITPNM1-216ENST00000534749 MYT1LQ9UL68 1186 aa21.17■□□□□ 0.98
PITPNM1-216ENST00000534749 ZNF326Q5BKZ1 582 aaKnown RBP21.15■□□□□ 0.98
PITPNM1-216ENST00000534749 MYT1Q01538 1121 aa21.13■□□□□ 0.97
PITPNM1-216ENST00000534749 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
PITPNM1-216ENST00000534749 ANP32CO43423 234 aa21.11■□□□□ 0.97
PITPNM1-216ENST00000534749 CEP162Q5TB80 1403 aa21.1■□□□□ 0.97
PITPNM1-216ENST00000534749 HIRIP3Q9BW71 556 aaPredicted RBP21.08■□□□□ 0.96
PITPNM1-216ENST00000534749 FBLN2P98095 1184 aa21.07■□□□□ 0.96
PITPNM1-216ENST00000534749 DDX10Q13206 875 aaKnown RBP21.07■□□□□ 0.96
PITPNM1-216ENST00000534749 CLIP1P30622 1438 aa21.04■□□□□ 0.96
PITPNM1-216ENST00000534749 SOGA1O94964 1423 aa20.95■□□□□ 0.94
PITPNM1-216ENST00000534749 CHIC2Q9UKJ5 165 aa20.92■□□□□ 0.94
PITPNM1-216ENST00000534749 FKBP8Q14318 412 aa20.9■□□□□ 0.94
PITPNM1-216ENST00000534749 WRNQ14191 1432 aaPredicted RBP eCLIP20.9■□□□□ 0.94
PITPNM1-216ENST00000534749 MROH2BQ7Z745 1585 aa20.9■□□□□ 0.94
PITPNM1-216ENST00000534749 ZNF777Q9ULD5 760 aaPredicted RBP20.89■□□□□ 0.93
PITPNM1-216ENST00000534749 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
PITPNM1-216ENST00000534749 SLC4A1APQ9BWU0 796 aaKnown RBP20.84■□□□□ 0.93
PITPNM1-216ENST00000534749 GOLGA3Q08378 1498 aa20.83■□□□□ 0.93
PITPNM1-216ENST00000534749 TONSLQ96HA7 1378 aa20.79■□□□□ 0.92
PITPNM1-216ENST00000534749 ABCC8Q09428 1581 aa20.79■□□□□ 0.92
PITPNM1-216ENST00000534749 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
PITPNM1-216ENST00000534749 HNRNPUQ00839 825 aaKnown RBP eCLIP20.76■□□□□ 0.91
PITPNM1-216ENST00000534749 EEA1Q15075 1411 aa20.73■□□□□ 0.91
PITPNM1-216ENST00000534749 DAXXQ9UER7 740 aaPredicted RBP20.72■□□□□ 0.91
PITPNM1-216ENST00000534749 FAM9BQ8IZU0 186 aa20.72■□□□□ 0.91
PITPNM1-216ENST00000534749 CDK11AQ9UQ88 783 aaPredicted RBP20.72■□□□□ 0.91
PITPNM1-216ENST00000534749 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
PITPNM1-216ENST00000534749 SIN3AQ96ST3 1273 aa20.69■□□□□ 0.9
PITPNM1-216ENST00000534749 IRX6P78412 446 aaPredicted RBP20.68■□□□□ 0.9
PITPNM1-216ENST00000534749 RRP7BPQ9NSQ0 103 aa20.67■□□□□ 0.9
PITPNM1-216ENST00000534749 SENP3-EIF4A1A0A087X0R7 540 aa20.65■□□□□ 0.9
PITPNM1-216ENST00000534749 BAZ1BQ9UIG0 1483 aaKnown RBP20.65■□□□□ 0.9
PITPNM1-216ENST00000534749 SALL2Q9Y467 1007 aaPredicted RBP20.63■□□□□ 0.89
PITPNM1-216ENST00000534749 CEP164Q9UPV0 1460 aa20.63■□□□□ 0.89
PITPNM1-216ENST00000534749 KANK4Q5T7N3 995 aaPredicted RBP20.62■□□□□ 0.89
PITPNM1-216ENST00000534749 MTUS2Q5JR59 1369 aa20.62■□□□□ 0.89
PITPNM1-216ENST00000534749 WIZO95785 1651 aa20.61■□□□□ 0.89
PITPNM1-216ENST00000534749 CLSPNQ9HAW4 1339 aa20.6■□□□□ 0.89
PITPNM1-216ENST00000534749 RTL5Q5HYW3 569 aaPredicted RBP20.53■□□□□ 0.88
PITPNM1-216ENST00000534749 RUSC2Q8N2Y8 1516 aa20.51■□□□□ 0.87
PITPNM1-216ENST00000534749 KIF27Q86VH2 1401 aa20.5■□□□□ 0.87
PITPNM1-216ENST00000534749 KDM2AQ9Y2K7 1162 aa20.5■□□□□ 0.87
PITPNM1-216ENST00000534749 MRS2Q9HD23 443 aa20.48■□□□□ 0.87
PITPNM1-216ENST00000534749 NPM2Q86SE8 214 aaKnown RBP20.44■□□□□ 0.86
PITPNM1-216ENST00000534749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.44■□□□□ 0.86
PITPNM1-216ENST00000534749 VPS8Q8N3P4 1428 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms